------- SECIS element -- id:5 -- grade:B ---- Chromosome = your_sequence Strand = + Positions = 17838 - 17902 Found by: Infernal (score=15.35) Covels (score=9.84) SECISearch1.0 (pattern=default) Stem2 length = 9 Apical loop length = 9 Insertion in stem2 = 0, 0 Free Energy = -20.1 Type = 1 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc (({((((((---....{[[{{(({(((((((.....-..-----..)))))))}))}}]]}----....))))))})) target UCUGCUGGG---UCCAUGAAAGGCCAGGUCUGAAAU-UU-----GAAGAUCUGACCACGAU----CCUUUCCAGUUGA **** ^^^ ****