_________________________________.______________________._________________________________________________________________________________
_|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| |       knownSP        |  secis_index:2     SeB_exonerate category:QUE_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_
_________________________________|______________________|_________________________________________________________________________________

 Blastx evalue: 6e-05
 Query name: gi|927194240|ref|XP_013930354.1| PREDICTED: selenoprotein W [Thamnophis sirtalis]
 Query range: 1-85  (total 85)

 Target: /data/www-rg/seblastian_results/926954655/tempfiles/temptarget.fasta
 Chromosome: your_sequence Strand: -
 Positions:
 -Exon 1  26624        26652
 -Exon 2  24922        24946
 -Exon 3  24599        24652
 -Exon 4  23944        24018
 -Exon 5  23042        23113

 Redox box: YES

Query   MAVKIKVVYC <---Intron---> GAUGYKPK <---Intron---> FLQLKKELEKEFLGKLEI <---Intron---> SGEGTPQVTGWFEVIV
        |||||||||| <   1677bp   > |||||||| <   269bp    > | |||||||||| ||||| <   580bp    > ||||||||||||||/|
Target  MAVKIKVVYC                GAUGYKPK                FQQLKKELEKEFPGKLEI                SGEGTPQVTGWFEVMV
        aggaaaggtt                ggtgtaca                tcccaagcgagtcgacga                agggaccgagttggag
        tctatattag                gcggaaca                taataaataaatcgatat                ggagccatcggtattt
        ggcgcggtt                tacaccacg                tagcggacaagtgcggat                tcagtaacaagcagga
                                    *                                                                       

Query   AGKTVHSKK <---Intron---> NGDGFVDDDVKLNKIIKAIKANLA
        ||| ||||| <   830bp    > |||||||/| ||||||||||  ||
Target  AGKMVHSKK                NGDGFVDNDAKLNKIIKAIKTALA
        ggaagctaa                agggtggaggacaaaaagaaagtg
        cgattacaa                agagttaaacataattactacctc
        tggggccag                catctccctcaccgatgccaatga
                                                         
 Sequence until next stop: 
TGA
 * 

 Distance CDS-SECIS: 827 ; UGA-SECIS: 1043