_________________________________.______________________._________________________________________________________________________________
_|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| |       knownSP        |  secis_index:3     SeB_exonerate category:ALI_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_
_________________________________|______________________|_________________________________________________________________________________

 Blastx evalue: 2e-24
 Query name: gi|961009001|ref|XP_014820571.1| PREDICTED: selenoprotein P [Calidris pugnax]
 Query range: 1-377  (total 396)

 Target: /data/www-rg/seblastian_results/596282192/tempfiles/temptarget.fasta
 Chromosome: BHFT01045694.1 Strand: +
 Positions:
 -Exon 1  18567        18760
 -Exon 2  19776        19988
 -Exon 3  20917        21031
 -Exon 4  22644        23084

 Redox box: YES

Query   MWAGLGLVLALCLLPGGGAETQ-NCKEPPEWHIGEENPMLNSRGSVTVVALLQASUYLCLLQASR <---Intron---> LEDLRVKLENEGLVNISYV
        ||||||| | |||||||| | |  ||||||| |||||||/ |||/|||||||||||||||||||| <   1015bp   > ||||//|| / |||||///
Target  MWAGLGLALVLCLLPGGGTEHQGRCKEPPEWSIGEENPMIKSRGTVTVVALLQASUYLCLLQASR                LEDLQLKLGSSGLVNITFI
        atggcgcgcgctcccgggagccgctagccgtaagggacaaatagagagggcccgattttctcgta                cggcccacgaagcgaaata
        tgcgtgtctttgttcgggcaaagggaaccaggtgaaacttacggctcttcttacggatgttaccg                taatatatggggttatctt
        ggtgaaacgcctccaaaaagtgtttaataagccgaatcgagaagagagttgcgtcacgctggtc                atacgagggattagctccct
                                                               *                                            

Query   VVNHQGAHSQRKFHLLKESVSDYITVYQQDEQQPDVWTTLNGSKDDFLIYDR <---Intron---> CGRLVYHLGLPYSFLSFQYVEESIKVAYCESK
        |||||| ||| |/ ||/| ||/ | ||||/  ||||| || | ||||||||| <   928bp    > ||||||||||||/|||| |||//|//||||  
Target  VVNHQGHHSQLKYQLLREKVSEDIPVYQQNATQPDVWATLRGKKDDFLIYDR                CGRLVYHLGLPYTFLSFPYVEKAIQIAYCEDT
        ggaccgcctccatcccagagtggacgtccagaccggtgatagaaggtcatga                tgccgtccgtctatcatctggagacagttgga
        ttaaagaacataaattgaatcaatctaaaaccacatgcctggaaaatttaag                gggttaatgtcacttgtcataactatcagaac
        gcccaactcgggcataaagtaacttacagtagattcgtaaacaattcgtcc                gttttttctcatttcgttatagattgccttact
                                                                                                            

Query   CGNCSY <---Intron---> TEPDIDGVCENITKSVDEKLAEIEPKPSGHHSHHHRGHGHGHGQGHRHRHHHHRGGSRHSKNEDHQASSESHRHHPHS
        |||||| <   1612bp   >                                                           |     ||     | || | 
Target  CGNCSY                ---------------------------------------------------------HHRHPHHHQHYHPHHHHHGHH
        tgattt                ---------------------------------------------------------cccccccccctcccccccgcc
        ggagca                ---------------------------------------------------------aagacaaaaaaacaaaaagaa
        tattac                ---------------------------------------------------------cttcttttatttctttttatt
                                                                                                            

Query   GRRHRVFGHSRHDQAGSQEQVDPAPPGESVEIPQDKRLUKKGKTSCKNQLTUNWQTASDSALSSUCCHCRHLLFEELGNSVTUQCRGALPNSCRUHGQLS
         /  |   ///|/ /        |    /    |  |||//|   ||  |/||||  /    | || | ||||||/  // /| | | ||/| || ||| 
Target  PKGDRPEVNNQHNSSALSLDPAKAALLSAAIALQGDRLUQRGSGICKRHLSUNWQLLTGPISSRUCUHURHLLFEDQQSTSSUHCHGELPSSURUQGQLL
        caggccggaaccaaagtacgcgaggcctggagtcggactcagagatacctatatcctagcatactttctcccttggccaaattctcggcctttatcgcct
        cagagcataaaaaggctgtaccaccttccctctagagtgaggggtgagatggagattcgctcgggggaggatttaaaagcgcgagagatcccgggagatt
        cagtgaaactgtccttgcgttcatctagatatgagcgcaaggtcccgctacacggcgctccctcacacaacggtatgacatcatttagcatcagaagggg
                                              *            *            * * *             *         * *     

Query   AEDITESUQURLLTAAUQSPAAGASE
        |/// ||||||| |||| ||||   |
Target  ADNVAESUQURLPTAAULSPAAKRGE
        ggagggttctcccaggtctcggaagg
        caatcacgaggtccccgtccccagga
        accgtgtagatgaattagaaaaagta
               * *      *         
 Sequence until next stop: 
ACCTGA
 T  * 

 Distance CDS-SECIS: 1109 ; UGA-SECIS: 1136