_________________________________.______________________._________________________________________________________________________________ _|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| | knownSP | secis_index:1 SeB_exonerate category:QUE_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_ _________________________________|______________________|_________________________________________________________________________________ Blastx evalue: 8e-34 Query name: gi|927126863|ref|XP_013908536.1| PREDICTED: selenoprotein M [Thamnophis sirtalis] Query range: 10-156 (total 156) Target: /data/www-rg/seblastian_results/380300109/tempfiles/temptarget.fasta Chromosome: BHFT01039670.1 Strand: - Positions: -Exon 1 42732 42824 -Exon 2 37742 37777 -Exon 3 36814 36848 -Exon 4 35374 35452 -Exon 5 34315 34512 Redox box: YES Query LLLGLLSAVAPLRAVQIDRSRLQWLARGKVE <---Intron---> SCGGUQLNRLPE <---Intron---> VKAFINEDLPLY <---Intron-- ||||||||||||||||||||||||||||||| < 4954bp > |||||/|||||| < 893bp > |||||||||||| < 1361bp Target LLLGLLSAVAPLRAVQIDRSRLQWLARGKVE SCGGURLNRLPE VKAFINEDLPLY cccgcctgggcccggcagcactcttgcgagg atggtctacccg gagtaaggcctt tttgttcctcctgctatagggtagtcggata ggggggtagtca tacttaaatcta gggggcgcggggccggccgccggggccgggg ccaaatgccgag agctccacgtg * Query -> HNMDLKYLAGADPELILLNIKFEELQ <---Intron---> RIPLSDMSRDEINQLMQQLGFYRKETPDSPVPDAFQMAPANSLPPDVEAMKGKPG > ||||||||||||||||||||/||||| < 861bp > |||||||||||||||||/||||||||||||||/|||||||||||||||||| / Target HNMDLKYLAGADPELILLNIQFEELQ RIPLSDMSRDEINQLMQELGFYRKETPDSPVPEAFQMAPANSLPPDVEAMKSRHR caagcatcggggcgcaccaactggcc aactagatcggaaccacgtgttcagacgtcgcggtcagcgatcccggggaaaaca aatataatcgcacattttatataata gtctgatcgaataattaatgtagaaccacctcactatcccactccatactaggag cccgcgacgtagctagcgcctacagcg accgtcgcgcgacaggaagaccgaaagttttcaccgggccttgagtgacggcacg Query KQKKGAGGSDL |/||||||||| Target KEKKGAGGSDL agaaggggtgc aaaagcggcat ggaggtgcaca Sequence until next stop: TAG *