_________________________________.______________________._________________________________________________________________________________ _|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| | knownSP | secis_index:3 SeB_exonerate category:QUE_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_ _________________________________|______________________|_________________________________________________________________________________ Blastx evalue: 3e-13 Query name: gi|1002602710|ref|XP_015680505.1| PREDICTED: selenoprotein H isoform X2 [Protobothrops mucrosquamatus] Query range: 1-130 (total 131) Target: /data/www-rg/seblastian_results/885712305/tempfiles/temptarget.fasta Chromosome: BHFT01013888.1 Strand: + Positions: -Exon 1 62311 62459 -Exon 2 63611 63756 -Exon 3 68147 68241 Redox box: YES Query MPPKGRKRKAAIPQAEATASSGEGANDVKKLPKIRKNEGPGDLHVTIEHC <---Intron---> KSURVFGRRAEAVSQELGLAFPDILVEVNLEKPR |||||||||| |||||||||/||| / |||||||/| | ||||||||| < 1151bp > |||||||| |||/|||| |||||| ||||||||| Target MPPKGRKRKAKIPQAEATASNGEGTSGVKKLPKIQKTEESEDLHVTIEHC KSURVFGRTAEAISQELCLAFPDIRVEVNLEKPR accagcaaagaaccgggagtagggaaggaatcaacaaggtggccgaagct aatcgtgcagggaacgctcgtcgacgggacgacc tccaggagacatcacaccccagagcggtaatcataacaacaatatctaag agggttggccactgaatgtctcatgtatataacg gtcggaaggagctaaacaactagacttgaagcgcggtaagacttgctgc tacaactacatgtccaggcgcttcctggcctaacg * Query RNSFEVVLLKKDGTK <---Intron---> IELWSGLKKGPPRKLKFPEPSNIVEMVKCNL ||||||||||||||| < 4390bp > |||||||||||||||||||||||||||| || Target RNSFEVVLLKKDGTK IELWSGLKKGPPRKLKFPEPSNIVEMVKLNL aaatgggctaaggaa agctagcaagcccatatcgcaaaggagacat gagtattttaaagc atatgggtaagccgatatcacgattattatat atctagtcgagtcc aagagtttaagaccagacaacccctagggcca Sequence until next stop: CTAAAGTCAACAGTGATGGAGTAG L K S T V M E * Distance CDS-SECIS: 574 ; UGA-SECIS: 805