_________________________________.______________________._________________________________________________________________________________
_|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| |       knownSP        |  secis_index:2     SeB_exonerate category:ALI_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_
_________________________________|______________________|_________________________________________________________________________________

 Blastx evalue: e-131
 Query name: gi|927115335|ref|XP_013919774.1| PREDICTED: type II iodothyronine deiodinase isoform X1 [Thamnophis sirtalis]
 Query range: 1-280  (total 280)

 Target: /data/www-rg/seblastian_results/854389537/tempfiles/temptarget.fasta
 Chromosome: BHFT01040576.1 Strand: -
 Positions:
 -Exon 1  24123        24344
 -Exon 2  8897         9514

 Redox box: no

Query   MGLLSIDLLITLQILPVFFSNCLFLALYDSVVLLKHMVLLLSCSKAARGEWRRMLTSEGLRCVWNSFLLDAYKQ <---Intron---> VKLGGDAPNS
        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| <  14608bp   > |||||/||||
Target  MGLLSIDLLITLQILPVFFSNCLFLALYDSVVLLKHMVLLLSCSKAARGEWRRMLTSEGLRCVWNSFLLDAYKQ                VKLGGEAPNS
        agttaagctaaccaccgtttatctcgctgtggctacagcccattaggcggtcaacatggtctgtaatccggtac                gatggggcat
        tgttgtatttctattctttcagtttctaacttttaatttttggcaccggagggttccagtggtgagtttacaaa                tatggaccac
        gcgactcggcatgcggttcccctcccctcggccggcggttgtccgtattagaggcaagcactcgtctcctccgg                gagtaatatc
                                                                                                            

Query   NVIHIPNGTAESSSNCRWKSSMGKYGSECHLLDFAKSDRPLVINFGSATUPPFTNQLSAFGKLVEEFSSVADFLLVYIDEAHPSDGWAAPGISSSFEVKK
        |||||||||||||||||||||||||||||||||||||/||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Target  NVIHIPNGTAESSSNCRWKSSMGKYGSECHLLDFAKSERPLVINFGSATUPPFTNQLSAFGKLVEEFSSVADFLLVYIDEAHPSDGWAAPGISSSFEVKK
        agacacagaggaaaatataatagatgagtcctgtgatgcccgaatgtgatcctaacctgtgatgggttagggtctgtagggcctggtggcgattttggaa
        attatcagccagggagggagctgaaggagattatcacagctttatgcccgcctcaatcctgattaatcgtcattttataacaccaggcccgtccctataa
        ttccatttttacccccagaccgaatatactcactcaagcatacctgatcattcacggtctcgggagcttgtctgaccttgtcaatcgttttcatatacga
                                                         *                                                  

Query   HRNQEDRCAAAHQLLKKFSLPPQCQIVADCMDNNANVAYGVSFERVCIIQRQKIAYLGGKGPFFYNLQEVRLWLEQNFRKRUNPNVPDKNSRGLSF
        ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||/  | ||||||
Target  HRNQEDRCAAAHQLLNKFSLPPQCQIVADCMDNNANVAYGVSFERVCIIQRQKIAYLGGKGPFFYNLQEVRLWLEQNFRKRUNPNLSSKKSRGLSF
        caacggatgggccctaatttccctcagggtagaagaggtggttgcgtaacacaagtcggagctttaccggcctcgcataaatacattaaatagctt
        agaaaaggcccaattaatctccagattcagtaaacatcagtctagtgttagaatcatggagcttaataatgtgtaaatgaggacatcgaacggtct
        tgcaacattttcgtatattgaagcgagttcgcttctgttacctatactaaaaattcgggacttccttagtatgggaccgaaatataatggaaagct
                                                                                         *              
 Sequence until next stop: 
TAA
 * 

 Distance CDS-SECIS: 1349 ; UGA-SECIS: 1391