Command line: [/mnt/NFS_UPF/soft/exonerate/exonerate-2.2.0-x86_64/bin/exonerate -m p2g --showtargetgff -q /home/u137251/Desktop/SelK.fa -t genomic_SJYR01000223.1]
Hostname: [am30923-101066u]

C4 Alignment:
------------
         Query: SPP00000016_1.0  Protein  Selenoprotein K (SelK)  Homo sapiens  Complete
        Target: SJYR01000223.1:subseq(867780,200000) Kobus ellipsiprymnus isolate DFW-375 scaffold215_size1221246, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 259
   Query range: 3 -> 94
  Target range: 100176 -> 99887

      4 : IleSerAsnGlyGlnValLeuAspSerArgSerGlnSerProTrpArgLeuSerLeuI :     23
          |||||||||||||||||||||:!!|||!:!|||||||||! !!! ! !||||||!!!|
          IleSerAsnGlyGlnValLeuAsnSerLysSerGlnSerGln***ThrLeuSerPheI
 100176 : ATCTCAAATGGACAAGTGTTGAACAGCAAGAGTCAATCCCAATGAACATTATCTTTTA : 100119

     24 : leThrAspPhePheTrpGlyIleAlaGluPheValValLeuPhePheLysThrLeuLe :     42
          |||||! !||||||!! ||||||||||||||||||||||||||||||:::||||||||
          leThrGlyPhePheCysGlyIleAlaGluPheValValLeuPhePheArgThrLeuLe
 100118 : TCACAGGTTTCTTCTGCGGAATAGCTGagtttgtggttttgtttttcagaactcTGCT : 100062

     43 : uGlnGlnAspValLysLysArgArgSerTyrGlyAsnSerSerAspSerArgTyrAsp :     61
          |||||||||||||||||||||| !!.!!||||||!:!||||||:!!||||||||||||
          uGlnGlnAspValLysLysArg***GlyTyrGlySerSerSerAsnSerArgTyrAsp
 100061 : TCAGCAAGATGTGAAAAAGAGATGAGGTTATGGAAGCTCATCCAATTCCAGATATGAT : 100005

     62 : AspGlyArgGlyProProGlyAsn-----Pro<->ProArgArgMetGlyArgIleAs :     78
          !!:|||||||||||||||||||||#####|||   ||||||||||||||| !!||| !
          GluGlyArgGlyProProGlyAsn#####ProValProArgArgMetGly***IleTy
 100004 : GAAGGAAGAGGGCCACCAGGAAACTACTCCCTGTCCCCAGAAGAATGGGTTGAATTTA :  99946

     79 : nHisLeu<->Arg-----GlyProSerProProProMetAlaGlyGlyUnkGlyArg :     94
          !||||||   ! !#####||||||!:!|||||| !!||||||.!!|||   ||||||
          rHisLeuAlaThr#####GlyProAsnProProSerMetAlaSerGly***GlyArg
  99945 : TCACTTAGCCACCTGCTTGGCCCTAATCCTCCTTCAATGGCCAGTGGATGAGGAAGG :  99888

vulgar: SPP00000016_1.0 3 94 . SJYR01000223.1:subseq(867780,200000) 100176 99887 - 259 M 66 198 F 0 5 M 1 3 G 0 3 M 10 30 G 0 3 M 1 3 F 0 5 M 13 39
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2019-11-18
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
SJYR01000223.1:subseq(867780,200000)	exonerate:protein2genome:local	gene	99888	100176	259	-	.	gene_id 1 ; sequence SPP00000016_1.0 ; gene_orientation .
SJYR01000223.1:subseq(867780,200000)	exonerate:protein2genome:local	cds	99888	100176	.	-	.	
SJYR01000223.1:subseq(867780,200000)	exonerate:protein2genome:local	exon	99888	100176	.	-	.	insertions 6 ; deletions 0 ; frameshifts 10
SJYR01000223.1:subseq(867780,200000)	exonerate:protein2genome:local	similarity	99888	100176	259	-	.	alignment_id 1 ; Query SPP00000016_1.0 ; Align 100177 4 198 ; Align 99974 70 3 ; Align 99968 71 30 ; Align 99935 81 3 ; Align 99927 82 39
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis
