------- SECIS element -- id:1 -- grade:B ----
 Chromosome = PISW01004272.1:subseq_36127,100000_ Strand = + Positions = 94795 - 94876
 Found by:  Infernal (score=13.72) Covels (score=17.45)
 Stem2 length = 8   Apical loop length = 15   Insertion in stem2 = 0, 0
 Free Energy = -9.77

         ..(((((((............(((((((((((((((...............))))))))))))))).........)))))))..
 model   uucggucaugcg-----UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc
         ...((((((............([[{(({((((({{(...............)}})))))}))}]]).....-.-.))))))...
 target  UCAUGUAGUCGUCUUUAUAAAUGAAGACACAGGCACAAAUCACCCCUGAGAGAUCCUGUUUCAGAACCACC-A-AACUACACCA
                              ****           ^^^                       ****                  

------- SECIS element -- id:2 -- grade:A ----
 Chromosome = PISW01004272.1:subseq_36127,100000_ Strand = + Positions = 50202 - 50275
 Found by:  Infernal (score=11.03) Covels (score=19.57)
 Stem2 length = 9   Apical loop length = 18   Insertion in stem2 = 0, 0
 Free Energy = -23.67

         ..(((((((.......(((((((((((((((................)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..((((((..--....{[[{(({(((((((..................)))))))}))}]]}..--..-..))))))..
 target  CCCUGGGAAC--AGAAUGAAGCGCUCAGCGUCCCGGGAACACCUCCCUCGCUGAGGGCCGACUC--CC-CGUCCCAGAG
                         ****           ^^                         ****