------- SECIS element -- id:1 -- grade:A ----
 Chromosome = PISW01005197.1:subseq_0,100000_ Strand = + Positions = 33383 - 33456
 Found by:  Infernal (score=20.66) Covels (score=30.42)
 Stem2 length = 9   Apical loop length = 13   Insertion in stem2 = 0, 0
 Free Energy = -13.94

         ..(((((((...........(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcg----UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..((((({(...........([[((({(((({(((.....--........)))}))))})))]])----.--.)})))))..
 target  UGUCAGGGAUGGCAUCUCCAUGAAGGAGGGGCCCGAAGCC--CUUGCGGGCGGACCUCCCCUGAG----C--CUGUCUGAAG
                             ****           ^^                        ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = PISW01005197.1:subseq_0,100000_ Strand = + Positions = 31374 - 31455
 Found by:  Infernal (score=10.86)
 Stem2 length = 9   Apical loop length = 20   Insertion in stem2 = 0, 1
 Free Energy = -10.01

         ..(((((((.......(((((((((((((((..................))))))).))))))))...........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC---cuuuuuggggcgggcca-ggcCuGAUGuu--u-uuucaugaccggc
         .(({((((((......{[[{((((-(((((....................)))))-.))))}]]}.......-..))))))})).
 target  UCCCGUCAGGCCUCAGUGAUUUCA-GCUAUACAAUAGGAGAGCAGGUGGAGUGGU-AUGGAUGAUGCGGGGC-UCCUUGACAGGU
                         ****            ^^                           ****