_________________________________.______________________._________________________________________________________________________________ _|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| | knownSP | secis_index:1 SeB_exonerate category:QUE_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_ _________________________________|______________________|_________________________________________________________________________________ Blastx evalue: 9e-24 Query name: gi|947231749|ref|XP_006149430.2| PREDICTED: type I iodothyronine deiodinase isoform X1 [Tupaia chinensis] Query range: 1-249 (total 249) Target: /data/www-rg/seblastian_results/86295606/tempfiles/temptarget.fasta Chromosome: PISW01001659.1:subseq_45703,100000_ Strand: + Positions: -Exon 1 35600 35921 -Exon 2 44429 44572 -Exon 3 50001 50200 -Exon 4 52173 52238 Redox box: no Query MGLPRAGLWLKRLWVFLQLTVQVAVGKVLLTLFPERVKQHILALGQKTGIARNPNFAHDNWIPTFFSTQYFWFVLKVYWQRLEDTTEPGGLAPNGPVVHL ||||/|||||/|||| ||/ /||||||| | ||| ||||||/|/ /| ||/|//||| || / ||||||||| |||||| ||||| ||| ||| | Target MGLPQAGLWLRRLWVLLQVALQVAVGKVCLILFPTRVKQHIVAMNRK-----NPHFSYDNWAPTLYGVQYFWFVLKVRWQRLEDRTEPGGPAPNCPVVQL agcccggctcaactgcccggccggggagtcactcaagaccaggaaca-----acctttgatgcactggcttttgcagctcccggaagcggcgcatcggcc tgtcacgtgtggtgtttatctatctgatgttttccgtaaattctaga-----acatcaaagccctagtaatgtttatggagtaagcacggcccagcttat gggcgaggggggcgccgggcggatgcagcgactcgacgaccgcgcag-----ccctctccgcgcgccggtcgtcgacaggacgcgtgaatgtccctgcgc Query SGQRCDIWDFMQG <---Intron---> DRPLVLNFGSCTUPSFLFKFDQFKRLIEDFSSIADFLIIYIEEAHASD <---Intron---> GWAFKNN ||||| ||||||| < 8507bp > /|||||||||||||||||||||||||/||| ||||||||||||||||| < 5428bp > ||||||| Target SGQRCSIWDFMQG NRPLVLNFGSCTUPSFLFKFDQFKRLVEDFCSIADFLIIYIEEAHASD GWAFKNN tgcctaatgtacg aactgcatgatatcttctatgctaacgggtttaggtcaatagggcgtg gtgtaaa cgagggtgatta gagctttatgggcgcctttataatagttaatgctcattttataacacc aggctaaa aaggcccgccga ccgggggttgctcatattcatcgcgattactccaactcccccaaacaa tcgccgcc * Query VNIRNHRNLQDRLQAAHLLLDRSPQCPVVVDTMQNQSSQLYAALPERLYVLQEGRILYK <---Intron---> GKPGPWNYDPEEVRAVLEKLRS |||||||/|||||||| ||| | |||||||||||||||/|||||||||||||||||||| < 1972bp > |||||||| ||||||||||| | Target VNIRNHRDLQDRLQAARLLLGRRPQCPVVVDTMQNQSSRLYAALPERLYVLQEGRILYK GKPGPWNYHPEEVRAVLEKLHS gaaaaccgccgcccggccccgaccctcggggaacacaacctggccgactgccggaacta gacgctatccgggcggcgacca tatgaagataagtaccgtttgggcagctttactaaagggtacctcagtattaaggttaa gacgcgaaacaatgcttaatag gccgttgtcgccggaccgggcgccgccgggcgggcaccggcaggcggctgcggcgcccg tatctgcctagattttgagtct Sequence until next stop: TAG *