------- SECIS element -- id:1 -- grade:A ----
 Chromosome = SJPD01000026.1:subseq_4602791,100137_ Strand = + Positions = 99487 - 99556
 Found by:  Infernal (score=25.34) Covels (score=23.95)
 Stem2 length = 10   Apical loop length = 15   Insertion in stem2 = 0, 0
 Free Energy = -18.26

         ..(((((((.......(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         .((((({[(---....{[[(((((((((((......--.........)))))))))))]]}..--..-.)]}))))).
 target  GUGCCAGAA---AGAAUGAAGCGACUGGGUCAAAGC--CGAAAGGACACUCAGUUGCUGAUGC--AU-CUGGUGGUGA
                         ****           ^^^                       ****                 

------- SECIS element -- id:2 -- grade:A ----
 Chromosome = SJPD01000026.1:subseq_4602791,100137_ Strand = + Positions = 54067 - 54136
 Found by:  Infernal (score=21.84) Covels (score=16.36)
 Stem2 length = 10   Apical loop length = 11   Insertion in stem2 = 0, 0
 Free Energy = -10.12

         ..(((((((.......(((((((((((((((...............)))))))))))))))..........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc
         ...((((((.--....{[[{((((((((((......-..-----...))))))))))}]]}......-.-.))))))...
 target  UUCAUAUUUG--UUUAUGACAGUCAUAGUUAAAACA-UG-----GAAAGCUAUGGCUUGAUUUUGAA-A-AAAGUAUUUC
                         ****          ^^^                        ****