
genewise output
Score 71.98 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000022_1.0   70 EWQKKLTPEQFYVTREKGTE                          PFS 
                     E +K+LTP Q++VT+EKGTE                           F  
                     ELRKRLTPLQYHVTQEKGTE           P:S[agt]       AFE 
ULFR01000001.1-70001 gcaaccaccctcgacgagagAGGTATAGC  Intron 1   TAGTgtg 
                     atgagtcctaaatcaaagca  <2-----[69939:66212]-2> cta 
                     agagggatggctttggaata                          cta 


SPP00000022_1.0   94 GIYLNNKEAGMYHCVCCDSPLF                          S 
                     G Y  +K  G+Y CV C SPLF                          S 
                     GEYTYHKAHGIYKCVVCGSPLF           S:K[aaa]       S 
ULFR01000001.1-66201 ggtatcagcgatatggtgacttAAGTAAGTA  Intron 2   TAGAt 
                     gaacaaacagtaagttgggctt  <2-----[66133:63551]-2> c 
                     aatactactgacattttattac                          t 


SPP00000022_1.0  118 EKKYCSGT                          WPSFSEAHGTSGSDE 
                     E K+ S +                          WPSF        SD  
                     ETKFDSNS          G:G[gga]        WPSF---YDLINSDT 
ULFR01000001.1-63546 gaatgtatGGTATGTT  Intron 3   CAGGAtctt   tgcaatga 
                     acatacac <1-----[63521:52996]-1>  gcct   aattacac 
                     aggtccta                          gtac   ttacctca 


SPP00000022_1.0  142 SHTGILRRLDTSLGSARTEVVCKQ                       CE 
                         I    D S G  R E  C Q                       C  
                     ----ITCTDDYSFGMHRVETSCTQ                       CG 
ULFR01000001.1-52957     aataggtttgacaggaatacGTCAGTT  Intron 4   CAGtg 
                         tcgcaaactgtagtacggca<0-----[52897:50093]-0>gg 
                         tatttccatggcgtgacctg                       tt 


SPP00000022_1.0  168 AHLGHVFPDGPGPNGQRFCINSVALKFKP                     
                     AHLGH+F DGP P G+R+CINS +L F+P                     
                     AHLGHIFDDGPRPTGKRYCINSASLAFEP                     
ULFR01000001.1-50086 gccgcatgggcccagacttaatgttgtgc                     
                     catgattaagcgccgagagtaccctctac                     
                     tttctatctgatataaaccatataattgt                     


//
Making a S in phase 2 intron
Making a K in phase 2 intron
Making a G in phase 1 intron
>ULFR01000001.1:subseq(38258415,100107).pep
ELRKRLTPLQYHVTQEKGTESAFEGEYTYHKAHGIYKCVVCGSPLFKSETKFDSNSGWPS
FYDLINSDTITCTDDYSFGMHRVETSCTQCGAHLGHIFDDGPRPTGKRYCINSASLAFEP
//
>ULFR01000001.1:subseq(38258415,100107).[70001:49998].sp
GAACTGAGAAAGCGGCTGACACCTCTGCAGTACCATGTTACTCAGGAGAAAGGAACTGAA
AGTGCCTTTGAAGGAGAATATACATACCATAAAGCCCATGGGATATACAAATGTGTTGTT
TGTGGAAGTCCTTTATTCAAATCTGAAACGAAGTTTGACTCCAATTCAGGATGGCCTTCA
TTCTATGATCTAATCAACTCTGACACAATTACATGTACTGATGACTACTCATTTGGGATG
CACAGGGTTGAGACAAGCTGCACTCAGTGTGGTGCTCATCTTGGCCATATATTTGACGAT
GGGCCACGTCCAACTGGAAAACGATACTGCATAAATTCAGCTTCATTAGCTTTTGAGCCT
//
ULFR01000001.1:subseq(38258415,100107)	GeneWise	match	70001	50000	76.97	-	.	ULFR01000001.1:subseq(38258415,100107)-genewise-prediction-1
ULFR01000001.1:subseq(38258415,100107)	GeneWise	cds	70001	69940	0.00	-	0	ULFR01000001.1:subseq(38258415,100107)-genewise-prediction-1
ULFR01000001.1:subseq(38258415,100107)	GeneWise	intron	69939	66212	0.00	-	.	ULFR01000001.1:subseq(38258415,100107)-genewise-prediction-1
ULFR01000001.1:subseq(38258415,100107)	GeneWise	cds	66211	66134	0.00	-	1	ULFR01000001.1:subseq(38258415,100107)-genewise-prediction-1
ULFR01000001.1:subseq(38258415,100107)	GeneWise	intron	66133	63551	0.00	-	.	ULFR01000001.1:subseq(38258415,100107)-genewise-prediction-1
ULFR01000001.1:subseq(38258415,100107)	GeneWise	cds	63550	63522	0.00	-	1	ULFR01000001.1:subseq(38258415,100107)-genewise-prediction-1
ULFR01000001.1:subseq(38258415,100107)	GeneWise	intron	63521	52996	0.00	-	.	ULFR01000001.1:subseq(38258415,100107)-genewise-prediction-1
ULFR01000001.1:subseq(38258415,100107)	GeneWise	cds	52995	52898	0.00	-	2	ULFR01000001.1:subseq(38258415,100107)-genewise-prediction-1
ULFR01000001.1:subseq(38258415,100107)	GeneWise	intron	52897	50093	0.00	-	.	ULFR01000001.1:subseq(38258415,100107)-genewise-prediction-1
ULFR01000001.1:subseq(38258415,100107)	GeneWise	cds	50092	50000	0.00	-	0	ULFR01000001.1:subseq(38258415,100107)-genewise-prediction-1
//
