
genewise output
Score 146.95 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000021_1.0    1 MSFCSFFGGEVFQNHFEP                          VYVCA 
                     M+FC FFGGE +Q HFE                           +Y+C+ 
                     MAFCRFFGGEDYQGHFEA          G:G[ggt]        IYICS 
ULFR01000025.1-55889 agttattggggtcgctggGGTAAGGC  Intron 1   CAGGTatatt 
                     tctggttggaaaagatac <1-----[55834:51157]-1>  tatgc 
                     gtccgcccggctgcccgc                          acttc 


SPP00000021_1.0   25 KCGYELFSSRSKYAHSSPWPAFTETIHADSVAKRPEHNRSEALK      
                     KCGYELFSS+SK+ HSSPWPAFT  IH+DS++K  E  R  A K      
                     KCGYELFSSQSKFLHSSPWPAFTHPIHSDSISKYLE--RPGAFK      
ULFR01000025.1-51139 atgtgtttactatccttctcgtaccacagaatattg  ccggta      
                     aggaattcgacattacccgcctcactagagtcaata  gcgcta      
                     acctaacccgcacttactgattctttccccccgcaa  caatcg      


SPP00000021_1.0   69                        VSCGKCGNGLGHEFLNDGPKPGQSRF 
                                            VSCGKCGNGLGHEFL+DGP+ GQSRF 
                                            VSCGKCGNGLGHEFLDDGPQKGQSRF 
ULFR01000025.1-51013 GTGAGGA  Intron 2   CAGgttgatgagcgcgtcgggccagctct 
                     <0-----[51013:50117]-0>tcggaggagtgaattaagcaagacgt 
                                            catcgtgtcgctaccctccagcgttc 


SPP00000021_1.0   95 XIFSSSLKFVPKG                                     
                     XIFSSSL FVPKG                                     
                     XIFSSSLTFVPKG                                     
ULFR01000025.1-50038 tataatcatgcag                                     
                     gttggctcttcag                                     
                     aatcttcatttat                                     


//
Making a G in phase 1 intron
>ULFR01000025.1:subseq(225892,101157).pep
MAFCRFFGGEDYQGHFEAGIYICSKCGYELFSSQSKFLHSSPWPAFTHPIHSDSISKYLE
RPGAFKVSCGKCGNGLGHEFLDDGPQKGQSRFXIFSSSLTFVPKG
//
>ULFR01000025.1:subseq(225892,101157).[55889:49998].sp
ATGGCTTTCTGCAGGTTCTTCGGCGGGGAGGACTATCAGGGCCACTTCGAGGCCGGTATA
TACATTTGTTCCAAATGCGGCTATGAATTATTCTCCAGCCAGTCCAAATTCCTTCATTCA
TCCCCTTGGCCAGCTTTTACCCATCCTATTCACAGCGACAGCATCTCCAAGTACTTAGAA
CGCCCAGGAGCTTTCAAGGTCTCATGTGGCAAGTGTGGGAATGGCCTGGGCCATGAATTC
CTCGACGATGGCCCCCAAAAGGGCCAGTCTCGTTTCTGAATATTTAGCAGTTCTCTCACA
TTTGTTCCTAAAGGT
//
ULFR01000025.1:subseq(225892,101157)	GeneWise	match	55889	50000	147.95	-	.	ULFR01000025.1:subseq(225892,101157)-genewise-prediction-1
ULFR01000025.1:subseq(225892,101157)	GeneWise	cds	55889	55835	0.00	-	0	ULFR01000025.1:subseq(225892,101157)-genewise-prediction-1
ULFR01000025.1:subseq(225892,101157)	GeneWise	intron	55834	51157	0.00	-	.	ULFR01000025.1:subseq(225892,101157)-genewise-prediction-1
ULFR01000025.1:subseq(225892,101157)	GeneWise	cds	51156	51014	0.00	-	2	ULFR01000025.1:subseq(225892,101157)-genewise-prediction-1
ULFR01000025.1:subseq(225892,101157)	GeneWise	intron	51013	50117	0.00	-	.	ULFR01000025.1:subseq(225892,101157)-genewise-prediction-1
ULFR01000025.1:subseq(225892,101157)	GeneWise	cds	50116	50000	0.00	-	0	ULFR01000025.1:subseq(225892,101157)-genewise-prediction-1
//
