
genewise output
Score 318.39 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000012_1.0   47 AAKHHVNGNRTVEPFPEGTQMAVF                          
                     + KHHVNGN  VEPFPEG  MA+F                          
                     SGKHHVNGNSMVEPFPEGMHMAIF          G:G[ggg]        
ULFR01000081.-170468 tgaccgagaaaggctcggacagatGGTAAGTT  Intron 1        
                     cgaaatagagttactcagtatctt <1-----[170395:159116    
                     atattgtgctgtactagagcgaat                          


SPP00000012_1.0   71      MGCFWGAERKFWVLKGVYSTQVGFAGGYTSNPTYKEVCS      
                          MGCFWGAE+KFW  KGVYSTQVG+AGGYT NPTY+EVCS      
                          MGCFWGAEKKFWKQKGVYSTQVGYAGGYTPNPTYEEVCS      
ULFR01000081.-159118 CAGGGagtttgggaattacaggttacggtgggtacacatgggtt      
                     -1>  tggtggcaaatgaaagtaccatgacggaccaccaaatgc      
                          gctcggagaatgggaaccttaattaaatcatcgtaacta      


SPP00000012_1.0  111                           KTGHAEVVRVVYQPEHMSFEELL 
                                               KTGH EVVRVV+QPE +SFE+LL 
                               E:G[ggc]        KTGHTEVVRVVFQPEIISFEKLL 
ULFR01000081.-158996 GGTAAGGT  Intron 2   AAGGCaagcagggcggtccgaaatgacc 
                      <1-----[158995:14258-1>  acgacattgtttacattgtaatt 
                                               atcttacgagatgaaccctgagc 


SPP00000012_1.0  135 KVFWENHDPTQ                          MRQGNDHGTQYR 
                     KVFWENHDPTQ                          MRQGND GTQYR 
                     KVFWENHDPTQ          G:G[ggg]        MRQGNDVGTQYR 
ULFR01000081.-142510 agttgacgcacGGTAGAGT  Intron 3   TAGGGaccgagggactc 
                     attgaaaacca <1-----[142476:12443-1>  tgagaatgcaag 
                     gccggttcgaa                          gggatttgagtg 


SPP00000012_1.0  159 SAIYPTSAKQMEAALSSKENYQK                       VLS 
                     SAIY  +  QME+AL SK +YQK                        L+ 
                     SAIYTVTPDQMESALKSKNDYQK                       ALT 
ULFR01000081.-124397 tgatagacgcagtgtataagtcaGTAAGGA  Intron 4   CAGgta 
                     cctactccaatacctacaaaaaa<0-----[124328:50159-0>ctc 
                     ttctaccataggtcgatattcag                       aga 


SPP00000012_1.0  185 EHGFGPITTDIREGQTFYYAEDYHQQYLSKNPNGYCGLGGTGVSCPVGI 
                     E+ +G ITT+IRE   FYYAE+YHQQYLSK+PNGYCGLGGTGVSCP+GI 
                     ENSLGVITTEIREAPEFYYAEEYHQQYLSKHPNGYCGLGGTGVSCPIGI 
ULFR01000081.1-50149 gaatggaaagacggcgtttgggtccctcaaccagttgcggaggttcaga 
                     aagtgttccatgaccataacaaaaaaatgaacagaggtggcgtcgctgt 
                     gttggccatactgtagctttaattggcacgctttctatacagtcttttt 


SPP00000012_1.0  234 K                                                 
                     K                                                 
                     K                                                 
ULFR01000081.1-50002 a                                                 
                     a                                                 
                     a                                                 


//
Making a G in phase 1 intron
Making a G in phase 1 intron
Making a G in phase 1 intron
>ULFR01000081.1:subseq(1556490,220468).pep
SGKHHVNGNSMVEPFPEGMHMAIFGMGCFWGAEKKFWKQKGVYSTQVGYAGGYTPNPTYE
EVCSGKTGHTEVVRVVFQPEIISFEKLLKVFWENHDPTQGMRQGNDVGTQYRSAIYTVTP
DQMESALKSKNDYQKALTENSLGVITTEIREAPEFYYAEEYHQQYLSKHPNGYCGLGGTG
VSCPIGIK
//
>ULFR01000081.1:subseq(1556490,220468).[170468:49998].sp
TCAGGTAAACATCATGTGAATGGGAACAGTATGGTTGAACCCTTTCCAGAGGGAATGCAC
ATGGCAATATTTGGGATGGGCTGTTTCTGGGGGGCAGAGAAAAAATTTTGGAAGCAGAAA
GGAGTCTACTCTACTCAAGTAGGTTATGCAGGAGGATATACCCCAAATCCCACGTATGAA
GAAGTCTGTTCAGGCAAAACTGGCCATACTGAAGTCGTGCGAGTGGTATTTCAGCCAGAA
ATCATCAGCTTTGAGAAACTGCTCAAGGTCTTCTGGGAGAATCATGACCCGACACAAGGG
ATGCGGCAGGGAAATGATGTTGGGACACAGTATCGGTCTGCTATCTATACAGTCACCCCA
GATCAAATGGAGTCTGCCTTGAAATCTAAAAATGATTACCAAAAGGCATTGACAGAGAAT
AGTTTGGGGGTCATCACAACTGAAATCCGTGAGGCTCCAGAGTTCTATTATGCTGAAGAA
TATCATCAGCAGTACCTAAGCAAGCACCCTAATGGTTACTGTGGACTTGGAGGCACAGGG
GTTTCCTGTCCTATTGGTATTAAA
//
ULFR01000081.1:subseq(1556490,220468)	GeneWise	match	170468	50000	318.39	-	.	ULFR01000081.1:subseq(1556490,220468)-genewise-prediction-1
ULFR01000081.1:subseq(1556490,220468)	GeneWise	cds	170468	170396	0.00	-	0	ULFR01000081.1:subseq(1556490,220468)-genewise-prediction-1
ULFR01000081.1:subseq(1556490,220468)	GeneWise	intron	170395	159116	0.00	-	.	ULFR01000081.1:subseq(1556490,220468)-genewise-prediction-1
ULFR01000081.1:subseq(1556490,220468)	GeneWise	cds	159115	158996	0.00	-	2	ULFR01000081.1:subseq(1556490,220468)-genewise-prediction-1
ULFR01000081.1:subseq(1556490,220468)	GeneWise	intron	158995	142582	0.00	-	.	ULFR01000081.1:subseq(1556490,220468)-genewise-prediction-1
ULFR01000081.1:subseq(1556490,220468)	GeneWise	cds	142581	142477	0.00	-	2	ULFR01000081.1:subseq(1556490,220468)-genewise-prediction-1
ULFR01000081.1:subseq(1556490,220468)	GeneWise	intron	142476	124436	0.00	-	.	ULFR01000081.1:subseq(1556490,220468)-genewise-prediction-1
ULFR01000081.1:subseq(1556490,220468)	GeneWise	cds	124435	124329	0.00	-	2	ULFR01000081.1:subseq(1556490,220468)-genewise-prediction-1
ULFR01000081.1:subseq(1556490,220468)	GeneWise	intron	124328	50159	0.00	-	.	ULFR01000081.1:subseq(1556490,220468)-genewise-prediction-1
ULFR01000081.1:subseq(1556490,220468)	GeneWise	cds	50158	50000	0.00	-	0	ULFR01000081.1:subseq(1556490,220468)-genewise-prediction-1
//
