
genewise output
Score 371.53 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000037_1.0  438 KNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVS         
                     K N KKSQ+PVQLDLG ML  LE+KQH++  KQS KPVV+S         
                     KKNRKKSQIPVQLDLGDMLAVLEEKQHAEKLKQSFKPVVLS         
ULFR01000024.1:59683 aaaaaaacacgccgtggacggtggaccggatacttacggct         
                     aaagaagatctatatgattcttaaaaacaataactactttc         
                     gataagtgttggttggtggatgaaagtaaaagaatatgata         


SPP00000037_1.0  479                           VGAVPVLSKECASGERGRRMSQM 
                                                G V +  KE     +  +  Q  
                               -:V[gtt]        GGGVTLPLKESPRVTKTLQSVQK 
ULFR01000024.1:59806 GGTATACT  Intron 1   CAGTTggggatctagtcagaaatctgca 
                      <1-----[59807:61628]-1>  gggtctctaaccgtcactactaa 
                                               ttaaagcagatcagaatggatga 


SPP00000037_1.0  502 KTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKK                 
                      TPHNPLDSS+PL+KKGKQ+E+PK KKPTSLKK                 
                     NTPHNPLDSSSPLVKKGKQKEVPKPKKPTSLKK                 
ULFR01000024.1:61700 aaccactgtatctgaagacaggcacaacatcaa                 
                     accaactacgccttaagaaaatcacaaccctaa                 
                     ttacccgctttagcaggggaacggaggaaaaag                 


SPP00000037_1.0  535                        IILKERQERKQR-LQENAVSPAFTSD 
                                            IILKER++RKQ+ + E    P      
                                            IILKEREQRKQQHILEQMAIPKKADV 
ULFR01000024.1:61799 GTACATT  Intron 2   AAGaatagagccacccatgcagacaaggg 
                     <0-----[61799:63037]-0>tttaagaagaaaattaatctcaacat 
                                            ttgggaagaagactaaggtaggatct 


SPP00000037_1.0  560 DTQDGESGGDD-QFPEQAEL                          GPE 
                       Q+ ES  DD QF +                               P  
                     VEQNAESVPDDEQFCKAPRE          S:E[gag]        EPV 
ULFR01000024.1:63116 ggcaggtgcgggcttagcagGGTACAGG  Intron 3   CAGAGgcg 
                     taaacactcaaaatgaccga <1-----[63177:64650]-1>  act 
                     tggtaattttcaattaccaa                          gaa 


SPP00000037_1.0  583 GMDELISTPSVEDKSEEPPGTELQRDTEASHLAPNHTTFPKIHSRRFR  
                      + +  S+  V+ K  E  G+  Q  T +  L P    FPKIHSRRFR  
                     LLTQ--SSSEVDLKCTESSGS-VQNSTASLQLKP---SFPKIHSRRFR  
ULFR01000024.1:64662 ccac  aatgggtatagtagt gcatagttctac   atcaacacata  
                     ttca  ggcatatagcacggc taacccctatac   gtcatagggtg  
                     tgga  ttaagcgataactcc gaccttagggac   ctcacccaata  


SPP00000037_1.0  631                           YCSQMLSKEVDACVTDLLKELVR 
                                               YC+Q+LSKEVD+CVTDLLKELV  
                                D:D[gac]       YCTQVLSKEVDSCVTDLLKELVH 
ULFR01000024.1:64788 GAGTAAGTA  Intron 4   TAGCttacgcaagggatgagccagtgc 
                       <2-----[64790:68039]-2> agcattgaataggtcattaatta 
                                               ctcagttagttcctatcaaggtt 


SPP00000037_1.0  655 FQDRMYQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCVIISPNCEKIQS 
                     FQDR+YQKDPVKAKTKRRLV+GLREVLKHLKLKKLKCVIISPNCEKIQS 
                     FQDRLYQKDPVKAKTKRRLVMGLREVLKHLKLKKLKCVIISPNCEKIQS 
ULFR01000024.1:68110 tcgcctcagcgagaaacacgagcaggtaccacaatatgaatcatgaact 
                     taagtaaaactacacaggtttgtgattaatataatagtttccagaatac 
                     caccgtgactggcggacactgacaaagacggggggatccttattaatga 


SPP00000037_1.0  704 K                          GLDDTLHTIIDYACEQNIPFVF 
                     K                          GLD+TLH IID ACEQNIPFVF 
                     K          G:G[ggt]        GLDETLHLIIDTACEQNIPFVF 
ULFR01000024.1:68257 aGGTATTTT  Intron 5   CAGGTgtggacccaagagtgcaactgt 
                     a <1-----[68261:68448]-1>  gtaactatttaccgaaatcttt 
                     a                          ggtgtgtcatttatagttattt 


SPP00000037_1.0  728 ALNRKALGRSLNKAVPVSVVGIFSYDGAQ                     
                     ALNRKALG  +NK VPVSVVGIFSYDGAQ                     
                     ALNRKALGHCVNKLVPVSVVGIFSYDGAQ                     
ULFR01000024.1:68517 gcacagcgctgaatgcgagggatatgggcGTGAGTT  Intron 6    
                     ctagactgagtaattctgttgttgaagca<0-----[68604:70276] 
                     tctcatagccgtaagtttggaaccctttg                     


SPP00000037_1.0  757    DQFHKMVELTVAARQAYKTMLENVQQE                    
                        D FHKMVELT+ AR AYK M+  +++E                    
                        DHFHKMVELTMEARLAYKEMISALEKE                    
ULFR01000024.1:70274 TAGgctcaaggtaaggacgtagaatgtgag                    
                     -0>aataattatctacgtcaaattcctaaa                    
                        cctcaggagagaagggcgggtataggg                    


//
Making a V in phase 1 intron
Making a E in phase 1 intron
Making a D in phase 2 intron
Making a G in phase 1 intron
>ULFR01000024.1:subseq(13806600,118603).pep
KKNRKKSQIPVQLDLGDMLAVLEEKQHAEKLKQSFKPVVLSVGGGVTLPLKESPRVTKTL
QSVQKNTPHNPLDSSSPLVKKGKQKEVPKPKKPTSLKKIILKEREQRKQQHILEQMAIPK
KADVVEQNAESVPDDEQFCKAPREEEPVLLTQSSSEVDLKCTESSGSVQNSTASLQLKPS
FPKIHSRRFRDYCTQVLSKEVDSCVTDLLKELVHFQDRLYQKDPVKAKTKRRLVMGLREV
LKHLKLKKLKCVIISPNCEKIQSKGGLDETLHLIIDTACEQNIPFVFALNRKALGHCVNK
LVPVSVVGIFSYDGAQDHFHKMVELTMEARLAYKEMISALEKE
//
>ULFR01000024.1:subseq(13806600,118603).[59683:70357].sp
AAGAAAAATAGAAAAAAGAGTCAGATTCCTGTGCAGCTTGATTTGGGGGATATGCTGGCA
GTTTTGGAAGAAAAACAGCATGCAGAAAAATTAAAGCAATCATTTAAACCTGTGGTACTT
TCAGTTGGTGGTGGAGTAACATTGCCCTTAAAGGAATCTCCCAGAGTGACAAAAACTTTG
CAGTCAGTTCAGAAAAATACTCCACACAACCCCTTGGACTCTAGTTCTCCATTGGTCAAA
AAGGGGAAGCAGAAAGAAGTCCCGAAGCCAAAGAAGCCAACATCACTAAAAAAGATTATT
TTGAAGGAGAGAGAACAGCGAAAACAGCAACACATTTTAGAACAGATGGCTATACCGAAG
AAAGCTGACGTTGTTGAGCAGAATGCAGAATCTGTTCCTGATGACGAACAATTTTGTAAA
GCCCCCAGAGAAGAGGAGCCAGTACTTCTGACGCAAAGTAGTTCAGAAGTGGACTTGAAA
TGTACAGAATCCAGTGGCTCCGTGCAAAACTCCACTGCTTCATTGCAGTTGAAACCCAGC
TTTCCCAAAATCCACAGCCGAAGATTTAGAGACTACTGTACCCAAGTGCTTAGTAAAGAG
GTTGATAGCTGCGTTACAGATCTCCTAAAAGAGTTGGTTCATTTCCAAGACCGCCTGTAT
CAGAAAGACCCTGTGAAGGCCAAGACGAAACGCAGACTCGTTATGGGACTCAGAGAAGTA
TTGAAACACCTGAAGCTGAAGAAGTTGAAATGTGTCATCATTTCTCCAAATTGTGAAAAA
ATTCAGTCAAAAGGTGGGTTGGATGAGACTCTGCATCTCATAATTGATACTGCATGTGAA
CAGAATATTCCATTTGTTTTTGCTCTCAATCGCAAAGCTCTAGGGCACTGCGTGAATAAA
TTAGTGCCTGTTAGTGTGGTGGGAATATTCAGCTACGATGGTGCTCAGGACCACTTTCAC
AAAATGGTGGAATTGACAATGGAAGCAAGGCTGGCGTACAAGGAGATGATTTCAGCTTTA
GAGAAGGAG
//
ULFR01000024.1:subseq(13806600,118603)	GeneWise	match	59683	70357	374.53	+	.	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
ULFR01000024.1:subseq(13806600,118603)	GeneWise	cds	59683	59806	0.00	+	0	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
ULFR01000024.1:subseq(13806600,118603)	GeneWise	intron	59807	61628	0.00	+	.	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
ULFR01000024.1:subseq(13806600,118603)	GeneWise	cds	61629	61798	0.00	+	2	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
ULFR01000024.1:subseq(13806600,118603)	GeneWise	intron	61799	63037	0.00	+	.	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
ULFR01000024.1:subseq(13806600,118603)	GeneWise	cds	63038	63176	0.00	+	0	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
ULFR01000024.1:subseq(13806600,118603)	GeneWise	intron	63177	64650	0.00	+	.	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
ULFR01000024.1:subseq(13806600,118603)	GeneWise	cds	64651	64789	0.00	+	2	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
ULFR01000024.1:subseq(13806600,118603)	GeneWise	intron	64790	68039	0.00	+	.	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
ULFR01000024.1:subseq(13806600,118603)	GeneWise	cds	68040	68260	0.00	+	1	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
ULFR01000024.1:subseq(13806600,118603)	GeneWise	intron	68261	68448	0.00	+	.	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
ULFR01000024.1:subseq(13806600,118603)	GeneWise	cds	68449	68603	0.00	+	2	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
ULFR01000024.1:subseq(13806600,118603)	GeneWise	intron	68604	70276	0.00	+	.	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
ULFR01000024.1:subseq(13806600,118603)	GeneWise	cds	70277	70357	0.00	+	0	ULFR01000024.1:subseq(13806600,118603)-genewise-prediction-1
//
