
genewise output
Score 189.50 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000010_1.0   23 QDFYDFKAVNIRGKLVSLEKYRGS                       VS 
                     +DFY F   + RG+ VSLEKYRG                         + 
                     RDFYSFDVKDWRGRTVSLEKYRGK                       AT 
ULFR01000003.1:49112 agttttggagtagaagttgatcgaGTAAGTA  Intron 1   AAGga 
                     gatactataaggggctctaaagga<0-----[49184:49996]-0>cc 
                     acttttcggtgaaacgtggacaca                       at 


SPP00000010_1.0   49 LVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSN 
                     LVVNVAS C  T+++Y  LQ+LQR+ G  HF VLAFPCNQFG+ EP  N 
                     LVVNVASYCQHTEKNYIMLQELQREFGSSHFTVLAFPCNQFGEMEPGLN 
ULFR01000003.1:50003 cggaggattccagaataaccgcccgtgttctagtgtctactggagcgca 
                     tttatcgagaacaaaatttaatagatgccatcttctcgaatgatacgta 
                     gtacgttccgcaaatccgggacgagtaactctggcttctgtgaggatgt 


SPP00000010_1.0   98 KEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLA              
                      EI  FA   Y V+FP+FSKI + G+ A PAFK+L               
                     DEIIYFAESNYGVTFPIFSKIKILGSEASPAFKFLI              
ULFR01000003.1:50150 ggaattggtatggatcataaaaacgtggtcgtatca              
                     aattatcacaagtctcttgatattgcacccctattt              
                     cgcttttaattagacccctaaatattaaaaatatga              


SPP00000010_1.0  134                           TSGKEPTWNFWKYLVAPDGKVVG 
                                               +S KEP WNFWKYL++P+GKVV  
                               Q:D[gat]        SSKKEPKWNFWKYLISPEGKVVK 
ULFR01000003.1:50258 GGTAAGGT  Intron 2   CAGATttaagcatattatcaacggagga 
                      <1-----[50259:52949]-1>  ccaaacagatgaattgcagatta 
                                               tgagatggtcggtctctatatga 


SPP00000010_1.0  158 AWDPTVSVEEVRPQITALVRKLILLKREDL                    
                        P   +E ++  I AL+R++I+ K+EDL                    
                     YLKPEEPIENIKQDIAALIREIIIKKKEDL                    
ULFR01000003.1:53021 ttacggcagaaacgaggcaagaaaaaaggc                    
                     atacaactaataaatccttgatttaaaaat                    
                     cggtaacaaccggtactgtggataaggatt                    


//
Making a D in phase 1 intron
>ULFR01000003.1:subseq(15489573,103110).pep
RDFYSFDVKDWRGRTVSLEKYRGKATLVVNVASYCQHTEKNYIMLQELQREFGSSHFTVL
AFPCNQFGEMEPGLNDEIIYFAESNYGVTFPIFSKIKILGSEASPAFKFLIDSSKKEPKW
NFWKYLISPEGKVVKYLKPEEPIENIKQDIAALIREIIIKKKEDL
//
>ULFR01000003.1:subseq(15489573,103110).[49112:53110].sp
AGAGACTTTTATTCTTTTGACGTGAAGGATTGGAGAGGAAGAACCGTGTCTTTGGAGAAA
TACCGAGGCAAAGCAACTCTGGTTGTAAACGTGGCTAGTTACTGCCAGCACACAGAAAAA
AATTACATCATGCTGCAGGAACTCCAGCGAGAGTTTGGATCATCCCATTTCACTGTGTTG
GCCTTTCCTTGCAATCAGTTTGGGGAAATGGAGCCAGGTCTGAATGACGAGATCATTTAT
TTTGCTGAATCAAATTATGGAGTGACATTCCCCATCTTCAGTAAAATAAAAATTCTAGGT
TCTGAAGCATCACCAGCATTTAAATTTCTGATAGATTCTTCGAAAAAGGAACCTAAGTGG
AATTTCTGGAAGTATCTCATTAGCCCTGAAGGTAAAGTTGTGAAATACTTGAAGCCTGAA
GAACCCATAGAAAACATCAAGCAGGATATAGCCGCTCTGATTAGGGAGATAATTATAAAA
AAGAAGGAAGATCTT
//
ULFR01000003.1:subseq(15489573,103110)	GeneWise	match	49112	53110	189.50	+	.	ULFR01000003.1:subseq(15489573,103110)-genewise-prediction-1
ULFR01000003.1:subseq(15489573,103110)	GeneWise	cds	49112	49183	0.00	+	0	ULFR01000003.1:subseq(15489573,103110)-genewise-prediction-1
ULFR01000003.1:subseq(15489573,103110)	GeneWise	intron	49184	49996	0.00	+	.	ULFR01000003.1:subseq(15489573,103110)-genewise-prediction-1
ULFR01000003.1:subseq(15489573,103110)	GeneWise	cds	49997	50258	0.00	+	0	ULFR01000003.1:subseq(15489573,103110)-genewise-prediction-1
ULFR01000003.1:subseq(15489573,103110)	GeneWise	intron	50259	52949	0.00	+	.	ULFR01000003.1:subseq(15489573,103110)-genewise-prediction-1
ULFR01000003.1:subseq(15489573,103110)	GeneWise	cds	52950	53110	0.00	+	2	ULFR01000003.1:subseq(15489573,103110)-genewise-prediction-1
//
