TBLASTN 2.6.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: genome.fa
           3,184 sequences; 1,209,001,349 total letters



Query= SPP00000010_1.0 # Protein # Glutathione peroxidase 7 (GPx7) # Homo
sapiens # Complete

Length=187
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

PTFA01000081.1  Casuarius casuarius isolate B32419 scaffold_80, w...  164     2e-45
PTFA01000055.1  Casuarius casuarius isolate B32419 scaffold_54, w...  120     2e-30
PTFA01000490.1  Casuarius casuarius isolate B32419 scaffold_489, ...  59.3    6e-09
PTFA01000118.1  Casuarius casuarius isolate B32419 scaffold_117, ...  48.5    2e-05
PTFA01000489.1  Casuarius casuarius isolate B32419 scaffold_488, ...  48.5    2e-05
PTFA01000256.1  Casuarius casuarius isolate B32419 scaffold_255, ...  47.8    4e-05
PTFA01000001.1  Casuarius casuarius isolate B32419 scaffold_0, wh...  32.3    6.3  


>PTFA01000081.1 Casuarius casuarius isolate B32419 scaffold_80, whole genome 
shotgun sequence
Length=3960531

 Score = 164 bits (414),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 78/102 (76%), Positives = 86/102 (84%), Gaps = 4/102 (4%)
 Frame = +3

Query  35       GKLVSLEKYRGS----VSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFG  90
                GKL  +  +  S    VSLVVNVASECG+TD HY+ALQQLQRDLGP+HFNVLAFPCNQFG
Sbjct  1168932  GKLTCVAHFLISLVP*VSLVVNVASECGYTDSHYKALQQLQRDLGPYHFNVLAFPCNQFG  1169111

Query  91       QQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYL  132
                QQEPDSN+EIESFAR+TY  SFPMFSK AV+G GA PAFKYL
Sbjct  1169112  QQEPDSNREIESFARKTYGASFPMFSKTAVSGAGAIPAFKYL  1169237


 Score = 84.7 bits (208),  Expect = 9e-18, Method: Compositional matrix adjust.
 Identities = 37/54 (69%), Positives = 47/54 (87%), Gaps = 0/54 (0%)
 Frame = +2

Query  134      QTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALVRKLILLKREDL  187
                 ++G+EPTWNFWKYLV P+GKVV AWD TVSVEE+RP +T LVRK+IL K+++L
Sbjct  1171067  DSTGEEPTWNFWKYLVDPNGKVVKAWDSTVSVEEIRPYVTELVRKIILKKKDEL  1171228


 Score = 56.6 bits (135),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 26/30 (87%), Positives = 27/30 (90%), Gaps = 0/30 (0%)
 Frame = +2

Query  20       QQEQDFYDFKAVNIRGKLVSLEKYRGSVSL  49
                Q+E DFY FK VNIRGKLVSLEKYRGSVSL
Sbjct  1162508  QKETDFYTFKVVNIRGKLVSLEKYRGSVSL  1162597


>PTFA01000055.1 Casuarius casuarius isolate B32419 scaffold_54, whole genome 
shotgun sequence
Length=5338051

 Score = 120 bits (302),  Expect = 2e-30, Method: Composition-based stats.
 Identities = 57/97 (59%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
 Frame = +1

Query  40       LEKYRGSVSL----VVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPD  95
                L KY   +SL    VVNVAS C  TD++Y ALQ+L R+ GP HF VLAFPCNQFG+ EP 
Sbjct  2037943  LSKYSNLISLKATLVVNVASYCQHTDKNYIALQELHREFGPSHFTVLAFPCNQFGESEPS  2038122

Query  96       SNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYL  132
                S++EIESFA+  Y V+FP+F KI + G+ A PAFK+L
Sbjct  2038123  SSQEIESFAKGNYGVTFPVFHKIKILGSEAEPAFKFL  2038233


 Score = 71.6 bits (174),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 30/56 (54%), Positives = 42/56 (75%), Gaps = 0/56 (0%)
 Frame = +1

Query  132      LAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALVRKLILLKREDL  187
                LA +S KEP WNFWKYLV P+GKVV  W P   +  ++P++ +L+R++I+ KREDL
Sbjct  2041087  LADSSKKEPRWNFWKYLVNPEGKVVKFWRPEEPIGTIKPEVASLIRQIIMKKREDL  2041254


 Score = 38.5 bits (88),  Expect = 0.056, Method: Composition-based stats.
 Identities = 16/26 (62%), Positives = 21/26 (81%), Gaps = 0/26 (0%)
 Frame = +1

Query  23       QDFYDFKAVNIRGKLVSLEKYRGSVS  48
                +DFY F+  + RG++VSLEKYRG VS
Sbjct  2037274  KDFYSFEVKDSRGRIVSLEKYRGKVS  2037351


>PTFA01000490.1 Casuarius casuarius isolate B32419 scaffold_489, whole genome 
shotgun sequence
Length=293072

 Score = 59.3 bits (142),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 32/70 (46%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = -2

Query  23      QDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVL  82
               + FYD  A +++G+ V    +RG V L+ NVAS  G T + Y  L QLQ    P    VL
Sbjct  150706  KSFYDLSATSLQGEKVDFNNFRGRVVLIENVASL*GTTVRDYTQLNQLQARY-PRRLVVL  150530

Query  83      AFPCNQFGQQ  92
                FPCNQFG Q
Sbjct  150529  GFPCNQFGYQ  150500


 Score = 38.5 bits (88),  Expect = 0.060, Method: Compositional matrix adjust.
 Identities = 25/93 (27%), Positives = 38/93 (41%), Gaps = 23/93 (25%)
 Frame = -2

Query  108     YSVSFPMFSKIAVTGTGAHPAFKYL----------AQTSGKEP-------------TWNF  144
               +  +F +F K  V G   HP F YL          A     EP             +WNF
Sbjct  150238  FEPNFTLFQKCQVNGQDTHPVFAYLKAHLPAPADDAVHLMAEPRFVVWSPVRRADISWNF  150059

Query  145     WKYLVAPDGKVVGAWDPTVSVEEVRPQITALVR  177
                K+LV P+G+    + P +   ++ P I  L++
Sbjct  150058  EKFLVGPEGEPFRRYSPRMPTAQLEPDIQRLLK  149960


>PTFA01000118.1 Casuarius casuarius isolate B32419 scaffold_117, whole genome 
shotgun sequence
Length=3204144

 Score = 48.5 bits (114),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 37/121 (31%), Positives = 47/121 (39%), Gaps = 45/121 (37%)
 Frame = +3

Query  25      FYDFKAVNIRGK-LVSLEKYRGSVSLVVNVASECGFTDQHY-------------------  64
                YD+ A+ I G+  V  +KY G + L VNVA+  G T Q+                    
Sbjct  145731  IYDYGALTIDGEEYVPFKKYAGKMVLFVNVATY*GLTLQYLGKEAAAAAGPPRQRLSGQG  145910

Query  65      -------------------------RALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKE  99
                                          L  LQ +LGP+   VL FP NQFG+QEP  N E
Sbjct  145911  GGHIGGGPAWVR*LLR*PRPWPCLPAELNALQNELGPYGLVVLGFPSNQFGKQEPGQNSE  146090

Query  100     I  100
               I
Sbjct  146091  I  146093


>PTFA01000489.1 Casuarius casuarius isolate B32419 scaffold_488, whole genome 
shotgun sequence
Length=288360

 Score = 48.5 bits (114),  Expect = 2e-05, Method: Composition-based stats.
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 0/55 (0%)
 Frame = +1

Query  38      VSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQ  92
               ++L+   G V LV NVAS  G T + +    +LQ+  GP    VL FPCNQFG Q
Sbjct  151957  LALDSLLGRVLLVSNVASL*GTTARDFVQFNELQQRYGPRGLVVLGFPCNQFGHQ  152121


 Score = 35.0 bits (79),  Expect = 0.86, Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 47/124 (38%), Gaps = 29/124 (23%)
 Frame = +1

Query  84      FPCNQFGQQEPDSNKEIESFARRT-----YSVSFPMFSKIAVTGTGAHPAFKYLAQT---  135
               FPC  F   E  +N+EI            Y  +F +F K  V G  AHP F +L +    
Sbjct  152455  FPC-LFLS*ENATNEEILRSLEHVRPGNGYKPNFTLFEKCDVNGKDAHPLFTFLKEALPF  152631

Query  136     --------------------SGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITAL  175
                                      + +WNF K+L+ PDG     +       +++  I  L
Sbjct  152632  PHDDPSSLMTNPQYIIWSPVRRNDISWNFEKFLIGPDGVPFKRYSRHFETIKIQDDIELL  152811

Query  176     VRKL  179
               ++K+
Sbjct  152812  LQKV  152823


>PTFA01000256.1 Casuarius casuarius isolate B32419 scaffold_255, whole genome 
shotgun sequence
Length=1427201

 Score = 47.8 bits (112),  Expect = 4e-05, Method: Composition-based stats.
 Identities = 23/49 (47%), Positives = 29/49 (59%), Gaps = 0/49 (0%)
 Frame = +3

Query  44      RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQ  92
               RG V ++ NVAS+ G TD +Y  L  L          +LAFPCNQFG+Q
Sbjct  735783  RGFVCIITNVASK*GKTDVNYTQLVDLYARYAERGLRILAFPCNQFGKQ  735929


 Score = 45.8 bits (107),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 18/74 (24%)
 Frame = +3

Query  92      QEPDSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYL-AQTSGK------------  138
               QEP  N +I++FA + Y V F MFSKI V G  AHP + ++ AQ +G+            
Sbjct  736134  QEPGDNAQIKAFAEK-YGVKFDMFSKIDVNGDKAHPLWTWMKAQPAGRGTLGK*VWERGV  736310

Query  139     ----EPTWNFWKYL  148
                   +P W  W  L
Sbjct  736311  VETPQPAWRCWNSL  736352


>PTFA01000001.1 Casuarius casuarius isolate B32419 scaffold_0, whole genome shotgun 
sequence
Length=15094948

 Score = 32.3 bits (72),  Expect = 6.3, Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 34/59 (58%), Gaps = 3/59 (5%)
 Frame = +2

Query  28       FKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQR--DLGPHHFNVLAF  84
                F++  +RG  VSL ++ GSV +   + + C F++ HY +L ++QR  +L  H    + F
Sbjct  9222107  FQSAWLRGNFVSLPQFEGSVFVP*GICAVCTFSN*HY-SLYKMQRHSELAKHMRKKIMF  9222280



Lambda      K        H        a         alpha
   0.320    0.135    0.409    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 27781106853


  Database: genome.fa
    Posted date:  Oct 19, 2018  9:06 AM
  Number of letters in database: 1,209,001,349
  Number of sequences in database:  3,184



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40
