Query= SecS # Protein # Selenocysteine synthase (SecS) # Zebrafish

Length=490
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  KV885014.1 Monopterus albus unplaced genomic scaffold scaffold3...    156   2e-38


> KV885014.1 Monopterus albus unplaced genomic scaffold scaffold326.1, 
whole genome shotgun sequence
Length=650428

 Score =   156 bits (394),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 79/115 (69%), Positives = 84/115 (73%), Gaps = 24/115 (21%)
 Frame = +3

Query  1       MNSENFRLSEKLVSASYVRQGLDARRGHEQLIRRLLDQ----------------------  38
               MNSENF LSEKLVS+SY+RQG  ARR HEQLIR LL+Q                      
Sbjct  320895  MNSENFALSEKLVSSSYIRQGSQARRSHEQLIRHLLEQVKSATSPFLRVPADAPSLMLHV  321074

Query  39      --GKCPEEGWSESTIELFLNELAVMDSNNFLGNCGVGEREGRVASSLVARRHYRL  91
                 GKCPE+GWSEST+ELFLNELAVMDSNNFL NCGVGEREGRVASSLVARRHYR 
Sbjct  321075  LQGKCPEDGWSESTVELFLNELAVMDSNNFLSNCGVGEREGRVASSLVARRHYRF  321239


 Score =   107 bits (266),  Expect(2) = 2e-36, Method: Compositional matrix adjust.
 Identities = 53/74 (72%), Positives = 57/74 (77%), Gaps = 0/74 (0%)
 Frame = +3

Query  168     PRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTNLEEVERKIEEFGAENILCVHSTTSCF  227
               PR    S       +GFEPVV+EN LEGDELRTNLE VERKIEE GAENILCVHSTTSCF
Sbjct  322470  PRAFSVSYSYQTYLSGFEPVVVENALEGDELRTNLEAVERKIEELGAENILCVHSTTSCF  322649

Query  228     APRVPDRLEELSVL  241
               APRVPDR + LS +
Sbjct  322650  APRVPDR*DMLSFM  322691


 Score = 69.3 bits (168),  Expect(2) = 2e-36, Method: Compositional matrix adjust.
 Identities = 32/43 (74%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
 Frame = +1

Query  234     RLEELSVLCAKHDIPHIVNNAYGVQSSKCMHLIQQ-GARVGRI  275
               RLEEL+ +CAK++IPHIVNNAYGVQS+KCMHLIQQ GA   R+
Sbjct  322792  RLEELAAMCAKYNIPHIVNNAYGVQSTKCMHLIQQVGATQPRL  322920


 Score =   120 bits (302),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 54/65 (83%), Positives = 60/65 (92%), Gaps = 0/65 (0%)
 Frame = +3

Query  129     TGVRSVSSCFVVPMATGMSLTLCFLTLRHRRPKARYILWPRIDQKSCFKSMVTAGFEPVV  188
               TGVRSV++CFVVPMATGMSLTLCFLTLRHRRPKARYI+WPRIDQKSCFKSM+TAG    V
Sbjct  322071  TGVRSVATCFVVPMATGMSLTLCFLTLRHRRPKARYIIWPRIDQKSCFKSMITAGDNKTV  322250

Query  189     IENVL  193
               I +V+
Sbjct  322251  ISDVV  322265


 Score = 91.7 bits (226),  Expect = 6e-18, Method: Compositional matrix adjust.
 Identities = 42/49 (86%), Positives = 46/49 (94%), Gaps = 0/49 (0%)
 Frame = +1

Query  265     LIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFDENFIQEISKIYPGR  313
               +  QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFDE+FIQEIS++YPG 
Sbjct  323128  VFDQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFDESFIQEISQMYPGE  323274


 Score = 88.2 bits (217),  Expect = 8e-17, Method: Compositional matrix adjust.
 Identities = 37/49 (76%), Positives = 44/49 (90%), Gaps = 0/49 (0%)
 Frame = +2

Query  403     ARVVPLGVQQTVSGHTFSGFMSHSEAYPCPYLNAASAIGITKGDVTVCM  451
               +RVVPLG +Q +SG+TF GFMSHSEAYPCPYLN ASA+GIT+ DVT+CM
Sbjct  328859  SRVVPLGKEQVISGYTFHGFMSHSEAYPCPYLNTASAVGITREDVTLCM  329005


 Score = 79.3 bits (194),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 39/46 (85%), Positives = 42/46 (91%), Gaps = 0/46 (0%)
 Frame = +2

Query  90      RLIHGIGRSGDIAAVQPKAAGSSLLNKITNSVVLDVLKLTGVRSVS  135
               RLIHGIGRSGDIAAVQPKAAGSSLLNK+TNSVVLD+LKL G   +S
Sbjct  321656  RLIHGIGRSGDIAAVQPKAAGSSLLNKLTNSVVLDILKLAGAYMLS  321793


 Score = 59.7 bits (143),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 29/31 (94%), Positives = 31/31 (100%), Gaps = 0/31 (0%)
 Frame = +2

Query  312     GRASASPSLDVLITLLTLGANGYKKLLADRK  342
               GRASASPSLDVLITLLTLGANGYKKLL++RK
Sbjct  324386  GRASASPSLDVLITLLTLGANGYKKLLSERK  324478


 Score = 52.4 bits (124),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 26/32 (81%), Gaps = 0/32 (0%)
 Frame = +3

Query  342     KELYGHLAQELSALAARHGERLLKTPHNPISL  373
               KE+Y  LAQEL  LA+ HGERLL TPHNPISL
Sbjct  326427  KEIYSFLAQELKTLASAHGERLLHTPHNPISL  326522


 Score = 51.2 bits (121),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 25/31 (81%), Positives = 27/31 (87%), Gaps = 0/31 (0%)
 Frame = +2

Query  374     AMSLNHLEAHSSSAVTQLGSMLFTRQVSGAR  404
               AMSL+ L+A S  AVTQLGSMLFTRQVSGAR
Sbjct  326681  AMSLDGLQAQSEKAVTQLGSMLFTRQVSGAR  326773



Lambda      K        H        a         alpha
   0.320    0.134    0.389    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 82061711368