Command line: [exonerate --exhaustive yes -m p2g --showtargetgff -q /export/home/u114420/treball/fastas/GP7.x.fa -t GP7.extraction.KV885045.1.fa]
Hostname: [sitdoc]

C4 Alignment:
------------
         Query: GP7  Protein # Glutathione peroxidase 7 (GPx7) # Zebrafish
        Target: KV885045.1:subseq(0,100000) Monopterus albus unplaced genomic scaffold scaffold357.1, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 537
   Query range: 7 -> 147
  Target range: 2346 -> 1047

    8 : ValAlaSerGluCysGlyTyrThrAspGluHisTyrLysAspLeuGlnGlnLeuGlnLysAs :   28
        ||||||||||||||||||! !|||!!:||||||||||||   |||||||||||||||::!||
        ValAlaSerGluCysGlyCysThrGluGluHisTyrLysHisLeuGlnGlnLeuGlnArgAs
 2346 : GTAGCCAGTGAGTGTGGCTGCACTGAGGAACACTACAAAcacctgcagcagctccagcGAGA : 2286

   29 : pPheGlyProPheHisPheAsnValLeuAlaPheProCysAsnGlnPheGlyGlnGlnGluP :   49
        |!!.||||||!:!|||||||||||||||||||||||||||||||||||||||||||||||||
        pLeuGlyProTyrHisPheAsnValLeuAlaPheProCysAsnGlnPheGlyGlnGlnGluP
 2285 : CTTGGGGCCCTATCACTTCAACGTGCTGGCCTTCCCCTGCAACCAGTTTGGGCAGCAGGAGC : 2223

   50 : roGlySerAspLysGluIleAspSerPheValArgArgValTyrGlyValSerPheProIle :   69
        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  !
        roGlySerAspLysGluIleAspSerPheValArgArgValTyrGlyValSerPheProArg
 2222 : CCGGCAGCGACAAGGAGATCGACAGCTTTGTGCGCAGAGTCTATGGAGTCTCCTTCCCTCGA : 2163

   70 : PheSerLysIleAlaValValGlyIleGlyAlaAsnAsnAlaTyrLysTyrLeuGly{L}   :   89
        ||||||||||||||||||||| !!! !||||||||||||!.!||||||||||||! !{ }  
        PheSerLysIleAlaValValArgThrGlyAlaAsnAsnValTyrLysTyrLeuVal{G}++
 2162 : TTCAGTAAAATAGCAGTGGTCAGAACCGGAGCCAACAATGTCTACAAGTACCTTGTT{G}gt : 2102

   90 : >>>> Target Intron 1 >>>>  {eu}LeuSerSerLysHisSerSerVal  >>>>  :   98
                  786 bp           { !}  !! !..!   |||                
                                 ++{lu}ThrPheGlnAlaHisPheCysAsn++     
 2101 : .........................ag{AG}ACCTTTCAAGCacatttttgtaatgt..... : 1288

   99 : Target Intron 2 >>>>  PheLeuLeuIleSerGluAlaSerArgLysGluProThrT :  111
             93 bp            |||! !|||  !:!!|||:!!||| !!|||||||||  !|
                            -+PheSerLeuSerAlaGluSerSerGlyLysGluProAspT
 1287 : ....................tgTTCTCACTGTCTGCAGAGTCCTCTGGAAAGGAGCCTGATT : 1158

  112 : rpAsnPheTrpLysTyrLeuIleAspThrAspGlyLysValValAspAlaTrpGlyProGlu :  131
        ||||||||||||||||||||||||||..!:!!|||||||||||||||||||||||||||.!.
        rpAsnPheTrpLysTyrLeuIleAspValAsnGlyLysValValAspAlaTrpGlyProAsn
 1157 : GGAATTTCTGGAAGTATCTAATCGATGTAAATGGCAAAGTGGTGGACGCATGGGGACCAAAC : 1098

  132 : ValSerValLysGluIleArgProArgIleThrGluMetValArgLys :  147
        :!!|||||||||||||||||||||!:!|||.!!||||||||||||:!!
        IleSerValLysGluIleArgProLysIleAlaGluMetValArgGln
 1097 : ATTTCTGTCAAAGAAATCCGACCCAAAATAGCTGAAATGGTGCGGCAG : 1048

vulgar: GP7 7 147 . KV885045.1:subseq(0,100000) 2346 1047 - 537 M 81 243 S 0 1 5 0 2 I 0 782 3 0 2 S 1 2 M 8 24 5 0 2 I 0 89 3 0 2 M 50 150
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2017-11-22
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	gene	1048	2346	537	-	.	gene_id 1 ; sequence GP7 ; gene_orientation +
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	cds	2103	2346	.	-	.	
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	exon	2103	2346	.	-	.	insertions 0 ; deletions 0
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	splice5	2101	2102	.	-	.	intron_id 1 ; splice_site "GT"
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	intron	1317	2102	.	-	.	intron_id 1
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	splice3	1317	1318	.	-	.	intron_id 0 ; splice_site "AG"
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	cds	1291	1316	.	-	.	
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	exon	1291	1316	.	-	.	insertions 0 ; deletions 0
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	splice5	1289	1290	.	-	.	intron_id 2 ; splice_site "gt"
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	intron	1198	1290	.	-	.	intron_id 2
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	splice3	1198	1199	.	-	.	intron_id 1 ; splice_site "TG"
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	cds	1048	1197	.	-	.	
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	exon	1048	1197	.	-	.	insertions 0 ; deletions 0
KV885045.1:subseq(0,100000)	exonerate:protein2genome:local	similarity	1048	2346	537	-	.	alignment_id 1 ; Query GP7 ; Align 2347 8 243 ; Align 1315 90 24 ; Align 1198 98 150
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis