TBLASTN 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: /cursos/20428/BI/genomes/2017/Ammotragus_lervia/genome.fa
           77,320 sequences; 2,650,836,958 total letters



Query= SPP00000035_1.0 # Protein # Thioredoxin reductase 2 (TR2) # Homo
sapiens # Complete

Length=524
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  NIVO01019577.1 Ammotragus lervia isolate NAZ scaffold5500_len73...  97.8    8e-24
  NIVO01028081.1 Ammotragus lervia isolate NAZ scaffold158735_len...  95.5    1e-20
  NIVO01039896.1 Ammotragus lervia isolate NAZ scaffold2252_len10...  99.8    1e-19
  NIVO01001699.1 Ammotragus lervia isolate NAZ scaffold1294_len48...  95.1    3e-18
  NIVO01041852.1 Ammotragus lervia isolate NAZ scaffold19593_len8...  86.3    2e-15
  NIVO01020513.1 Ammotragus lervia isolate NAZ scaffold283491_len...  63.5    5e-10
  NIVO01015737.1 Ammotragus lervia isolate NAZ scaffold12042_len1...  59.7    3e-07
  NIVO01018039.1 Ammotragus lervia isolate NAZ scaffold2881_len44...  55.8    4e-06
  NIVO01041139.1 Ammotragus lervia isolate NAZ scaffold5566_len10...  54.7    1e-05
  NIVO01010479.1 Ammotragus lervia isolate NAZ scaffold1466_len24...  50.1    3e-04
  NIVO01026070.1 Ammotragus lervia isolate NAZ scaffold20502_len1...  45.4    0.007
  NIVO01048552.1 Ammotragus lervia isolate NAZ scaffold99285_len6...  31.2    0.12 
  NIVO01027699.1 Ammotragus lervia isolate NAZ scaffold741_len267...  40.8    0.19 
  NIVO01008435.1 Ammotragus lervia isolate NAZ scaffold316_len126...  36.6    3.8  
  NIVO01064162.1 Ammotragus lervia isolate NAZ scaffold203060_len...  33.5    4.6  
  NIVO01073683.1 Ammotragus lervia isolate NAZ scaffold15628_len6...  35.4    8.5  


> NIVO01019577.1 Ammotragus lervia isolate NAZ scaffold5500_len738321_cov71, 
whole genome shotgun sequence
Length=736096

 Score = 97.8 bits (242),  Expect(2) = 8e-24, Method: Compositional matrix adjust.
 Identities = 45/53 (85%), Positives = 48/53 (91%), Gaps = 1/53 (2%)
 Frame = +2

Query  73      PSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDW  125
               P P GTRWGLGGTCVNVGCIPKKLMHQAALLGG+I+DAP+YGW VAQ  PHDW
Sbjct  239687  PLPPGTRWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAPHYGWRVAQ-APHDW  239842


 Score = 38.1 bits (87),  Expect(2) = 8e-24, Method: Compositional matrix adjust.
 Identities = 17/20 (85%), Positives = 20/20 (100%), Gaps = 0/20 (0%)
 Frame = +1

Query  58      AAQLGRKVAVVDYVEPSPQG  77
               AAQLG+KVAV+DYVEPSP+G
Sbjct  239524  AAQLGKKVAVLDYVEPSPRG  239583


 Score =   102 bits (253),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 54/81 (67%), Positives = 55/81 (68%), Gaps = 23/81 (28%)
 Frame = +3

Query  425     EVYHAHYKPLEFTVAGRDASQCYVK-----------------------MVCLREPPQLVL  461
               +VYHA YKPLEFTV  RDASQCYVK                       MVCLREPPQLVL
Sbjct  259398  QVYHAFYKPLEFTVPQRDASQCYVKVSVLWAWPGRTGPCHPR*PHAFQMVCLREPPQLVL  259577

Query  462     GLHFLGPNAGEVTQGFALGIK  482
               GLHFLGPNAGEVTQGFALGIK
Sbjct  259578  GLHFLGPNAGEVTQGFALGIK  259640


 Score = 90.1 bits (222),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 49/63 (78%), Gaps = 0/63 (0%)
 Frame = +3

Query  258     QQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWAIG  317
               QQM+ +V EHMA HGTR LRGCAP RV +LP  QL+VTW D  + ++D GTFDTVLWAIG
Sbjct  250317  QQMALLVTEHMAGHGTRVLRGCAPERVEKLPGQQLRVTWVDLASDRKDAGTFDTVLWAIG  250496

Query  318     RVP  320
               + P
Sbjct  250497  KGP  250505


 Score = 79.3 bits (194),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 37/46 (80%), Positives = 41/46 (89%), Gaps = 0/46 (0%)
 Frame = +2

Query  479     LGIKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGCXG  524
               L  +CGAS+ QV+RTVGIHPTC+EEV KLRISKRSGLDPTVTGC G
Sbjct  260270  LACRCGASFQQVIRTVGIHPTCAEEVAKLRISKRSGLDPTVTGC*G  260407


 Score = 76.6 bits (187),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 38/52 (73%), Positives = 43/52 (83%), Gaps = 0/52 (0%)
 Frame = +2

Query  317     GRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELT  368
               GRVP+T SLNLEKAGV T+P T KI VD++EATS+PHIYAIGDV E RP  T
Sbjct  256457  GRVPETASLNLEKAGVRTNPVTGKIFVDAQEATSIPHIYAIGDVAEVRPAPT  256612


 Score = 65.9 bits (159),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 30/33 (91%), Positives = 31/33 (94%), Gaps = 0/33 (0%)
 Frame = +2

Query  394     NVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEV  426
                VPTTVFTPLEYGCVGLSEE AVARHG+EHVEV
Sbjct  258092  QVPTTVFTPLEYGCVGLSEEAAVARHGEEHVEV  258190


 Score = 60.8 bits (146),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 28/45 (62%), Positives = 35/45 (78%), Gaps = 0/45 (0%)
 Frame = +1

Query  214     LKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSIPLRGFDQ  258
               +  SP   L+   + VALECAGFLTG+GLDTT+M+RS+PLR FDQ
Sbjct  249079  VPTSPSLALLSCLADVALECAGFLTGLGLDTTVMIRSVPLRAFDQ  249213


 Score = 57.8 bits (138),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 26/38 (68%), Positives = 30/38 (79%), Gaps = 0/38 (0%)
 Frame = +1

Query  362     EGRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNVPTTV  399
               +GRPELTP AIMAGRLL QRL G +SDLMDY +V  + 
Sbjct  257617  QGRPELTPTAIMAGRLLAQRLSGRTSDLMDYSSVSASA  257730


 Score = 54.7 bits (130),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 3/45 (7%)
 Frame = +1

Query  150     RKVKYFNIKASFVDEHTVCGVAKGGKEI---LLSADHIIIATGGR  191
               RKVKY N+KASFVD HTVCGV+KGG+E+   LL +   + A  GR
Sbjct  240880  RKVKYLNVKASFVDTHTVCGVSKGGEEVSTCLLGSQGPVWAGVGR  241014


 Score = 54.3 bits (129),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 24/27 (89%), Positives = 25/27 (93%), Gaps = 0/27 (0%)
 Frame = +2

Query  195     PTHIEGALEYGITSDDIFWLKESPGKT  221
               P  IEGALEYGITSDD+FWLKESPGKT
Sbjct  242294  PGQIEGALEYGITSDDLFWLKESPGKT  242374


 Score = 51.2 bits (121),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 22/23 (96%), Positives = 23/23 (100%), Gaps = 0/23 (0%)
 Frame = +2

Query  128     MAEAVQNHVKSLNWGHRVQLQDR  150
               MA+AVQNHVKSLNWGHRVQLQDR
Sbjct  240197  MADAVQNHVKSLNWGHRVQLQDR  240265


 Score = 45.4 bits (106),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 18/25 (72%), Positives = 22/25 (88%), Gaps = 0/25 (0%)
 Frame = +1

Query  175     KEILLSADHIIIATGGRPRYPTHIE  199
                + LLSA+HI+IATGGRPRYPTH+ 
Sbjct  241369  SQTLLSAEHIVIATGGRPRYPTHVS  241443


> NIVO01028081.1 Ammotragus lervia isolate NAZ scaffold158735_len630_cov85, 
whole genome shotgun sequence
Length=519

 Score = 95.5 bits (236),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 64/178 (36%), Positives = 94/178 (53%), Gaps = 16/178 (9%)
 Frame = +2

Query  56   KEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGW  115
            + AA+LG + AVV+         R  LGGTCVNVGC+PKK+M   A+    + D  +YG+
Sbjct  26   RRAAELGARAAVVE---------RHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGF  178

Query  116  EVAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGK  175
            +  +    +WR + E    +V  LN  ++  L    +   +  A+F  +        G K
Sbjct  179  QSCES-KFNWRIIKEKRDAYVSRLNTIYQNNLTKSHIDIIHGHAAFTCDPQPTVEVNGKK  355

Query  176  EILLSADHIIIATGGRPRYP--THIEGALEYGITSDDIFWLKESPGKTLVVGASYVAL  231
                +A HI+IATGG P  P  + I GA   GITSD  F L+E P +++ VGA Y+A+
Sbjct  356  ---YTAPHILIATGGVPSVPQESQIPGA-SLGITSDGFFQLEELPRRSVTVGAGYIAV  517


> NIVO01039896.1 Ammotragus lervia isolate NAZ scaffold2252_len1020358_cov73, 
whole genome shotgun sequence
Length=1021076

 Score = 99.8 bits (247),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 63/96 (66%), Gaps = 4/96 (4%)
 Frame = -3

Query  218     PGKTLVVGASYVALECAGFLTGIGLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLR  277
               PGKTLVVGASYVALECAGFL GIGLD T+M+RSI LRGFDQ M++ + EHM  HG +F+R
Sbjct  931341  PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMQEHGIKFIR  931162

Query  278     GCAPSRVR----RLPDGQLQVTWEDSTTGKEDTGTF  309
                  P +V     R  D  L++  E       +  +F
Sbjct  931161  EFVPIKVSGVAWRFVDSILRLKCERELGWVREEASF  931054


 Score = 70.5 bits (171),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 41/50 (82%), Gaps = 0/50 (0%)
 Frame = -3

Query  338     TQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSS  387
               T KI V   E T+VP+IYAIGD++EG+ ELTP+AI AGRLL QRL+GGS+
Sbjct  927231  TGKIPVTEEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGST  927082


 Score = 67.8 bits (164),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 30/39 (77%), Positives = 34/39 (87%), Gaps = 0/39 (0%)
 Frame = -2

Query  81      GLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQ  119
               GLGGTCVNVGCIPKKLMHQAALLG  ++D+ NYGW V +
Sbjct  942454  GLGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEE  942338


 Score = 62.8 bits (151),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 27/43 (63%), Positives = 33/43 (77%), Gaps = 0/43 (0%)
 Frame = -3

Query  460     VLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSE  502
               V+G H LGPNAGEVTQGFA  +KCG +  Q+  T+GIHP C+E
Sbjct  913671  VVGFHILGPNAGEVTQGFAAALKCGLTKDQLDSTIGIHPVCAE  913543


 Score = 62.0 bits (149),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 26/51 (51%), Positives = 36/51 (71%), Gaps = 0/51 (0%)
 Frame = -1

Query  117     VAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTV  167
               +++ V HDW +M EAVQNH+ SLNWG+RV L+++KV Y N    FV  H +
Sbjct  933674  LSRAVKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENSYGEFVGPHRI  933522


 Score = 60.1 bits (144),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 29/42 (69%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
 Frame = -3

Query  391     DYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEV-YHAHY  431
               DY+NVPTTVFTPLEYG  GLSEE+AV + G+E+VEV +  HY
Sbjct  920319  DYENVPTTVFTPLEYGSCGLSEEKAVEKFGEENVEVSFTLHY  920194


 Score = 41.2 bits (95),  Expect = 0.14, Method: Compositional matrix adjust.
 Identities = 14/27 (52%), Positives = 22/27 (81%), Gaps = 0/27 (0%)
 Frame = -3

Query  426     VYHAHYKPLEFTVAGRDASQCYVKMVC  452
               VYH+++ PLE+T+  RD ++CY K+VC
Sbjct  917832  VYHSYFWPLEWTIPSRDNNKCYAKVVC  917752


 Score = 38.1 bits (87),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 15/26 (58%), Positives = 21/26 (81%), Gaps = 0/26 (0%)
 Frame = -2

Query  56      KEAAQLGRKVAVVDYVEPSPQGTRWG  81
               +EAA+  +KV V+D+V P+P GTRWG
Sbjct  944929  QEAAKYDKKVMVLDFVTPTPLGTRWG  944852


> NIVO01001699.1 Ammotragus lervia isolate NAZ scaffold1294_len4820224_cov71, 
whole genome shotgun sequence
Length=4805144

 Score = 95.1 bits (235),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 67/112 (60%), Gaps = 4/112 (4%)
 Frame = +1

Query  177      ILLSADHIIIATGGRPRYPTHI-EGALEYG---ITSDDIFWLKESPGKTLVVGASYVALE  232
                +LL   H     G  P  P  +  G +  G   + SDD+F L   PG TLVVGASYVALE
Sbjct  4548823  VLLRGGHACDPRGPLPPAPFALAPGTVPRGSPSLCSDDLFSLPYCPGTTLVVGASYVALE  4549002

Query  233      CAGFLTGIGLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRV  284
                CAGFL G+GL+ T+M+RS+ LRGFDQ+M+  V   +   G RFLR   P  V
Sbjct  4549003  CAGFLAGLGLEVTVMVRSVLLRGFDQEMAEKVGACLQQLGVRFLRKFVPVEV  4549158


 Score = 72.8 bits (177),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 45/56 (80%), Gaps = 0/56 (0%)
 Frame = +3

Query  338      TQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSDLMDYD  393
                T KI V+  E TSVP++YA+GDV+EG+P+LTP+A+ AG+LL +RLFGG S+ + + 
Sbjct  4557231  TGKIPVNGEEQTSVPYVYAVGDVLEGKPQLTPVAVRAGKLLARRLFGGRSEKVSFS  4557398


 Score = 65.9 bits (159),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 29/39 (74%), Positives = 33/39 (85%), Gaps = 0/39 (0%)
 Frame = +3

Query  81       GLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQ  119
                GLGGTCVNVGCIPKKLMHQAALLG  + D+  +GWE +Q
Sbjct  4545639  GLGGTCVNVGCIPKKLMHQAALLGQALTDSRKFGWEYSQ  4545755


 Score = 59.3 bits (142),  Expect = 4e-07, Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%), Gaps = 0/43 (0%)
 Frame = +1

Query  460      VLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSE  502
                V+G H LGPNAGE+TQGFA  +KCG +   +  T+GIHPTC E
Sbjct  4566481  VIGFHVLGPNAGEITQGFAAAMKCGLTKQLLDATIGIHPTCGE  4566609


 Score = 55.5 bits (132),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (63%), Gaps = 0/51 (0%)
 Frame = +2

Query  117      VAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTV  167
                V+ PV H W  M EA+Q+HV SL+WG R+ L++  V Y N    FV+ H V
Sbjct  4547891  VSPPVRHSWATMTEAIQSHVGSLSWGRRLALRENAVTYVNSYGEFVEHHKV  4548043


 Score = 46.6 bits (109),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 20/25 (80%), Positives = 21/25 (84%), Gaps = 0/25 (0%)
 Frame = +3

Query  391      DYDNVPTTVFTPLEYGCVGLSEEEA  415
                DY NVPT VFTPLEYGC G SEE+A
Sbjct  4558002  DYVNVPTVVFTPLEYGCCGYSEEKA  4558076


 Score = 45.4 bits (106),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 19/29 (66%), Positives = 25/29 (86%), Gaps = 0/29 (0%)
 Frame = +3

Query  53       ACAKEAAQLGRKVAVVDYVEPSPQGTRWG  81
                +C++EAA LGRKV V+D+V PSP+GT WG
Sbjct  4544661  SCSQEAAVLGRKVMVLDFVVPSPRGTAWG  4544747


 Score = 40.8 bits (94),  Expect = 0.20, Method: Compositional matrix adjust.
 Identities = 15/29 (52%), Positives = 22/29 (76%), Gaps = 0/29 (0%)
 Frame = +1

Query  424      VEVYHAHYKPLEFTVAGRDASQCYVKMVC  452
                ++VYH  + PLE+TVA RD + CY K++C
Sbjct  4562728  LQVYHTLFWPLEWTVACRDNNTCYAKIIC  4562814


> NIVO01041852.1 Ammotragus lervia isolate NAZ scaffold19593_len861446_cov94, 
whole genome shotgun sequence
Length=853088

 Score = 86.3 bits (212),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 45/119 (38%), Positives = 73/119 (61%), Gaps = 4/119 (3%)
 Frame = -2

Query  390    MDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEFTVAGRDASQCYVK  449
              +DY+ +PT VF+    G VGLSEE+A+       V+V+ + ++P++ T+      + ++K
Sbjct  95998  VDYNMIPTAVFSLPNIGTVGLSEEQALEE--GHTVQVFESSFRPMKLTLT-ECQERTFMK  95828

Query  450    MVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEVVKLR  508
              +V   E  + VLG H +GP AGE+ QG A+ +K GA+      T+G+HPT +EE V +R
Sbjct  95827  LVVDAETDK-VLGCHMVGPEAGEIVQGLAIAMKAGATKQHFDETIGVHPTAAEEFVTMR  95654


> NIVO01020513.1 Ammotragus lervia isolate NAZ scaffold283491_len299_cov19_single, 
whole genome shotgun sequence
Length=299

 Score = 63.5 bits (153),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 41/101 (41%), Positives = 57/101 (56%), Gaps = 2/101 (2%)
 Frame = -1

Query  315  AIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMA  374
            AIGRVP+T SL LE AGV    +   I VD    TS  +I+A+GDV   R +LTP+AI  
Sbjct  299  AIGRVPNTASLGLEAAGVAVD-EMGAIKVDGYSRTSRENIWAVGDVT-NRVQLTPVAIHE  126

Query  375  GRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEA  415
                ++     +    D+  + T VF+  E G VGL+E++A
Sbjct  125  AMCFLETALKNNPTKPDHALIATAVFSQPEIGTVGLTEQDA  3


> NIVO01015737.1 Ammotragus lervia isolate NAZ scaffold12042_len120434_cov41, 
whole genome shotgun sequence
Length=92000

 Score = 59.7 bits (143),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 65/253 (26%), Positives = 111/253 (44%), Gaps = 14/253 (6%)
 Frame = +2

Query  225  GASYVALECAGFLTGIGLDTTIMM-RSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSR  283
            GA  + +E A   + +    T++  R   L   D+++       +     + + G    +
Sbjct  2    GAGVIGIEYATIFSALDTQVTVVEPRETMLEFIDKEIVEDFTYQLRDRNMKLIFGQKAEK  181

Query  284  VRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILV  343
            V R   G+  VT  +    K +T     VL+A GRV  T +LNL   G++     +  + 
Sbjct  182  VERDETGKCLVTLGNGRVLKAET-----VLFAAGRVGATDTLNLSACGLEADSRGRLKVD  346

Query  344  DSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPL  403
                 TSVP+IYA GD++ G P L   ++  GR+  +   G  +        P  ++   
Sbjct  347  PETFQTSVPNIYAAGDII-GFPSLASTSMEQGRIAARHAVGAPAG-EPPQFFPYGIYAVP  520

Query  404  EYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEFT-VAGRDASQCYVKMVCLREPPQLVLG  462
            E    GL+EEE + R G  + E   AH++      + G D+    +KM+   +  +L LG
Sbjct  521  EISTCGLTEEEVIER-GIPY-ECGIAHFRETSRGHIMGLDSG--LLKMIFSLKTRRL-LG  685

Query  463  LHFLGPNAGEVTQ  475
            +H +G  A E+  
Sbjct  686  VHIVGEGATELVH  724


> NIVO01018039.1 Ammotragus lervia isolate NAZ scaffold2881_len443227_cov46, 
whole genome shotgun sequence
Length=443000

 Score = 55.8 bits (133),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 106/236 (45%), Gaps = 16/236 (7%)
 Frame = +1

Query  242     LDTTIMM---RSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWED  298
               LDT + +   R   L   D+++       +     + + G    +V R  +G+  V+  +
Sbjct  305821  LDTQVTVVEPRETMLEFIDKEIVEDFTYQLRDRNMKLIFGQKAEKVERDENGKCLVSLGN  306000

Query  299     STTGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIG  358
                   K +T     VL+A GRV  T +LNL   G++     +  +      TSVP+IYA G
Sbjct  306001  GRVLKTET-----VLFAAGRVGATDTLNLSACGLEADSRGRLKVDPETFQTSVPNIYAAG  306165

Query  359     DVVEGRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVAR  418
               D++ G P L   ++  GR+  +   G  +        P  ++   E    GL+EEE + R
Sbjct  306166  DII-GFPSLASTSMEQGRIAARHAVGAPAG-EPPQFFPYGIYAVPEISTCGLTEEEVIER  306339

Query  419     HGQEHVEVYHAHYKPLEF-TVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEV  473
                G  + E   AH++      + G D+    +KM+   +  +L LG+H +G  A E+
Sbjct  306340  -GIPY-ECGIAHFRETSRGHIMGLDSG--LLKMIFSLKTRRL-LGVHIVGEGATEL  306492


> NIVO01041139.1 Ammotragus lervia isolate NAZ scaffold5566_len105759_cov21, 
whole genome shotgun sequence
Length=104711

 Score = 54.7 bits (130),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 52/175 (30%), Positives = 75/175 (43%), Gaps = 23/175 (13%)
 Frame = +1

Query  62     GRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPV  121
              G KVA+V+         R   GGTCVN GC+P K +  +A    + +    YG  +  P+
Sbjct  76528  GMKVALVE---------RKLFGGTCVNTGCMPTKTLVASAYAAHMARRGAEYGVVIESPI  76680

Query  122    PHDWRKM---AEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEIL  178
                D +++   A  V  + ++        + D  V   + +    D   V        E L
Sbjct  76681  RIDMKRIRARANTVATNARTGVEAWLRGMNDLTVLQGHARFEGPDHLLV-------NEAL  76839

Query  179    LSADHIIIATGGRPRYPTH--IEGALEYGITSDDIFWLKESPGKTLVVGASYVAL  231
              L A  I I  GGR   P    IE A++Y +T+  I  L   P   +VVG SYV L
Sbjct  76840  LRAPRIFINVGGRASVPDMPGIE-AVDY-LTNASILQLDAVPRHLIVVGGSYVGL  76998


> NIVO01010479.1 Ammotragus lervia isolate NAZ scaffold1466_len2495677_cov73, 
whole genome shotgun sequence
Length=2495322

 Score = 50.1 bits (118),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 24/49 (49%), Positives = 32/49 (65%), Gaps = 0/49 (0%)
 Frame = +1

Query  460     VLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEVVKLR  508
               V+G+H  G    E+ QGFA+ +K GA+ +    TV IHPT SEE+V LR
Sbjct  281005  VVGIHMQGIGCDEMLQGFAVAVKMGATKSDFDNTVAIHPTSSEELVTLR  281151


 Score = 44.3 bits (103),  Expect = 0.014, Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 28/44 (64%), Gaps = 1/44 (2%)
 Frame = +1

Query  370     IAIMAGRLLVQRLFGGSSD-LMDYDNVPTTVFTPLEYGCVGLSE  412
               +AI AGR L  RLF    D  +DYDN+PT VF+    G VGL+E
Sbjct  277435  VAIAAGRKLAHRLFECKKDSKLDYDNIPTVVFSHPPIGTVGLTE  277566


 Score = 36.6 bits (83),  Expect = 4.0, Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 25/33 (76%), Gaps = 0/33 (0%)
 Frame = +3

Query  217     SPGKTLVVGASYVALECAGFLTGIGLDTTIMMR  249
               S  ++++VGA Y+A+E AG L+ +G  T+IM+R
Sbjct  268587  SCSRSVIVGAGYIAVEIAGILSALGSKTSIMIR  268685


> NIVO01026070.1 Ammotragus lervia isolate NAZ scaffold20502_len18092_cov22, 
whole genome shotgun sequence
Length=13000

 Score = 45.4 bits (106),  Expect = 0.007, Method: Compositional matrix adjust.
 Identities = 27/68 (40%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
 Frame = -1

Query  54   CAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKK-LMHQAALLGGLIQDAPN  112
            CA +AAQLG K AV++         R   GGTC+N+GCIP K L+H + +          
Sbjct  241  CAIKAAQLGLKTAVIE--------KRDTFGGTCLNIGCIPSKALLHASEVFHEAGHTHAK  86

Query  113  YGWEVAQP  120
             G EV  P
Sbjct  85   LGVEVGTP  62


> NIVO01048552.1 Ammotragus lervia isolate NAZ scaffold99285_len663_cov19, 
whole genome shotgun sequence
Length=664

 Score = 31.2 bits (69),  Expect(2) = 0.12, Method: Compositional matrix adjust.
 Identities = 15/42 (36%), Positives = 22/42 (52%), Gaps = 0/42 (0%)
 Frame = +1

Query  209  DDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRS  250
            D IF L   P    V+G+  +ALE A  +  + + TT+  RS
Sbjct  472  DQIFELDTLPQSLAVIGSGVIALELAQAMQRLNVKTTVFARS  597


 Score = 29.6 bits (65),  Expect(2) = 0.12, Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 22/117 (19%)
 Frame = +2

Query  85   TCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEAVQNHVKSLNWGHR  144
            TC  VGC+P K++   A     IQ     G +VA  +          V  +++       
Sbjct  122  TCARVGCMPSKILISTANRMHGIQQTDQLGLKVAATID------TSGVMPYLR-------  262

Query  145  VQLQDR-KVKYFNIKASFVDEHTVCGVAK--GGKEILLSADH-----IIIATGGRPR  193
             QL+DR  +      AS+  EH + G A+    + I+++  H      IIA G  P 
Sbjct  263  -QLRDRFTLSTLKDVASWNKEHKISGQAQFIDSQTIVVNQTHYQAKSFIIAVGSTPN  430


> NIVO01027699.1 Ammotragus lervia isolate NAZ scaffold741_len2671294_cov68, 
whole genome shotgun sequence
Length=2674788

 Score = 40.8 bits (94),  Expect = 0.19, Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 37/61 (61%), Gaps = 2/61 (3%)
 Frame = -2

Query  354      IYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEE  413
                IYAIGDVV G P L   A   G + V+ + GG+  + DY+ VP+ ++T  E   VG SEE
Sbjct  2355053  IYAIGDVVAG-PMLAHKAEDEGIICVEGMAGGAVHI-DYNCVPSVIYTHPEVAWVGKSEE  2354880

Query  414      E  414
                +
Sbjct  2354879  Q  2354877


> NIVO01008435.1 Ammotragus lervia isolate NAZ scaffold316_len1262580_cov66, 
whole genome shotgun sequence
Length=1258718

 Score = 36.6 bits (83),  Expect = 3.8, Method: Compositional matrix adjust.
 Identities = 39/135 (29%), Positives = 58/135 (43%), Gaps = 9/135 (7%)
 Frame = -1

Query  190     GRPRY-PTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMM  248
               GRP + P   E A      +  I W +E PG+   +G+  V L+ A +LT   L    + 
Sbjct  401081  GRPGFNPLEKEMATHSSTLAWRIPW-REEPGRLQSMGSQRVGLD*ATYLTLPYLSLPYLS  400905

Query  249     RSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRV-RRLPDGQLQVTWEDSTTGKEDTG  307
               R +   G  Q   + V+    SHG R L GC+P  +       QL   +  S TG+ +  
Sbjct  400904  REM---GRRQ*QPAPVLLPEKSHGRRSLVGCSPWCL*ESNTTEQLHFHFSVSCTGEGNGN  400734

Query  308     TFDTVLWAIGRVPDT  322
                   + W   R+P T
Sbjct  400733  PLHVLAW---RIPGT  400698


> NIVO01064162.1 Ammotragus lervia isolate NAZ scaffold203060_len252_cov25_single, 
whole genome shotgun sequence
Length=252

 Score = 33.5 bits (75),  Expect = 4.6, Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 28/53 (53%), Gaps = 0/53 (0%)
 Frame = -1

Query  146  QLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYPTHI  198
            Q    +V++    ASFVD +T+  V   G+ + ++   I++  G RP  P HI
Sbjct  171  QFARNRVQHIRGTASFVDANTMKVVKNDGEIMNVTGTSILLTIGTRPYRPPHI  13


> NIVO01073683.1 Ammotragus lervia isolate NAZ scaffold15628_len64121_cov36, 
whole genome shotgun sequence
Length=63978

 Score = 35.4 bits (80),  Expect = 8.5, Method: Compositional matrix adjust.
 Identities = 26/75 (35%), Positives = 35/75 (47%), Gaps = 12/75 (16%)
 Frame = -1

Query  219    GKTLVVGASYVALECAGFLTGIGLDTTIMMRSIPL---RGFDQQMSSMVIEHMA------  269
              G T++   S +A  CAG   G G  T   +R +P+     FD  + SM  + MA      
Sbjct  32499  GSTVLQAVSCIAAPCAGRAGGPGFFTD*AIRDLPITLVHSFDGVLCSMSEKAMATHSILL  32320

Query  270    ---SHGTRFLRGCAP  281
                 SHG R L GC+P
Sbjct  32319  PGKSHGWRSLVGCSP  32275



Lambda      K        H        a         alpha
   0.320    0.137    0.423    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 338761558012


  Database: /cursos/20428/BI/genomes/2017/Ammotragus_lervia/genome.fa
    Posted date:  Nov 13, 2017  9:29 AM
  Number of letters in database: 2,650,836,958
  Number of sequences in database:  77,320



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40
