TBLASTN 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: /cursos/20428/BI/genomes/2017/Ammotragus_lervia/genome.fa
           77,320 sequences; 2,650,836,958 total letters



Query= SPP00000008_1.0 # Protein # Glutathione peroxidase 5 (GPx5) # Homo
sapiens # Complete

Length=221
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  NIVO01040474.1 Ammotragus lervia isolate NAZ scaffold5206_len21...    123   2e-29
  NIVO01038789.1 Ammotragus lervia isolate NAZ scaffold232_len768...    121   1e-28
  NIVO01055543.1 Ammotragus lervia isolate NAZ scaffold118_len124...    107   8e-24
  NIVO01038251.1 Ammotragus lervia isolate NAZ scaffold4054_len20...    106   2e-23
  NIVO01044831.1 Ammotragus lervia isolate NAZ scaffold59919_len4...  79.3    1e-14
  NIVO01025624.1 Ammotragus lervia isolate NAZ scaffold2655_len16...  65.9    3e-10
  NIVO01006926.1 Ammotragus lervia isolate NAZ scaffold1541_len19...  57.0    2e-07
  NIVO01039413.1 Ammotragus lervia isolate NAZ scaffold335_len956...  48.9    8e-05
  NIVO01053490.1 Ammotragus lervia isolate NAZ scaffold5646_len36...  37.4    0.49 
  NIVO01030317.1 Ammotragus lervia isolate NAZ scaffold354_len175...  37.0    0.61 
  NIVO01023330.1 Ammotragus lervia isolate NAZ scaffold82_len2848...  35.4    2.4  
  NIVO01053483.1 Ammotragus lervia isolate NAZ scaffold805_len325...  33.9    6.6  
  NIVO01064217.1 Ammotragus lervia isolate NAZ scaffold1397_len26...  33.5    8.6  
  NIVO01064688.1 Ammotragus lervia isolate NAZ scaffold1754_len27...  33.5    9.3  


> NIVO01040474.1 Ammotragus lervia isolate NAZ scaffold5206_len2152014_cov73, 
whole genome shotgun sequence
Length=2148920

 Score =   123 bits (309),  Expect = 2e-29, Method: Composition-based stats.
 Identities = 64/131 (49%), Positives = 83/131 (63%), Gaps = 5/131 (4%)
 Frame = +3

Query  91       PYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFS  150
                P+ L  L   C+    QE   N+EIL  LKYVRPGGGF P+F LFEK +VNGEK   +F+
Sbjct  1833126  PFLLASLVPSCSPL-SQENAKNEEILNCLKYVRPGGGFEPNFMLFEKCEVNGEKAHPLFA  1833302

Query  151      FLKHSCPHPSE----ILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSS  206
                FL+ + P PS+    ++   K I+W PV  +D+ WNFEKFLVGPDG+PV R+S R     
Sbjct  1833303  FLRETLPTPSDDATALMTDPKFITWSPVCRNDVSWNFEKFLVGPDGVPVRRYSRRFLTID  1833482

Query  207      VKTDILAYLKQ  217
                ++ DI   L Q
Sbjct  1833483  IEPDIETLLSQ  1833515


 Score = 61.2 bits (147),  Expect = 6e-09, Method: Composition-based stats.
 Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = +3

Query  39       TIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQ-YPELNALQEELKPYGLVVL  97
                T+Y + A  L   E        GK +L  NVA+  G T + Y ++N LQ  L P GLVVL
Sbjct  1832703  TVYAFSARPLAGGEPFHLASLRGKVLLIENVASL*GTTVRDYTQMNDLQRRLGPRGLVVL  1832882

Query  98       GFPCNQFGKQ  107
                GFPCNQFG Q
Sbjct  1832883  GFPCNQFGHQ  1832912


> NIVO01038789.1 Ammotragus lervia isolate NAZ scaffold232_len768847_cov70, 
whole genome shotgun sequence
Length=767384

 Score =   121 bits (304),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 52/72 (72%), Positives = 62/72 (86%), Gaps = 0/72 (0%)
 Frame = +2

Query  150     SFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKT  209
               S L+ SCPHPSE +G+ K ISW+P+ V DIRWNFEKFLVGPDG+PVMRW HR  VS+VK+
Sbjct  489614  SLLQQSCPHPSEFMGSIKHISWEPIMVRDIRWNFEKFLVGPDGVPVMRWFHRTPVSTVKS  489793

Query  210     DILAYLKQFKTK  221
               DILAY+KQF+TK
Sbjct  489794  DILAYMKQFQTK  489829


 Score =   113 bits (283),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 48/73 (66%), Positives = 63/73 (86%), Gaps = 0/73 (0%)
 Frame = -1

Query  149     FSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVK  208
                S L++SCP  S++LG+   + W+P+KVHDIRWNFEKFLVGPDG+PVMRW HRA+VS+VK
Sbjct  456944  LSLLQNSCPPTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMRWYHRASVSTVK  456765

Query  209     TDILAYLKQFKTK  221
               +D+L YLKQFK++
Sbjct  456764  SDMLEYLKQFKSE  456726


 Score = 89.7 bits (221),  Expect = 6e-18, Method: Compositional matrix adjust.
 Identities = 39/53 (74%), Positives = 45/53 (85%), Gaps = 0/53 (0%)
 Frame = +1

Query  28      MKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQYP  80
                +MDC+KD KGTIYDY+A  LN  E++ FKQY GKH+LFVNVATYCGLTAQYP
Sbjct  484732  FQMDCYKDVKGTIYDYDAFTLNGKEHIQFKQYAGKHVLFVNVATYCGLTAQYP  484890


 Score = 80.1 bits (196),  Expect = 8e-15, Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 44/57 (77%), Gaps = 0/57 (0%)
 Frame = -2

Query  28      MKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNA  84
                ++DC+K   GTIY+Y A+ LN  EY+ FKQY GKH+LFVNVATY GLTAQYP  N+
Sbjct  461044  FQVDCYKGVTGTIYEYGALTLNGEEYIQFKQYAGKHVLFVNVATY*GLTAQYPGKNS  460874


 Score = 79.7 bits (195),  Expect = 9e-15, Method: Compositional matrix adjust.
 Identities = 37/40 (93%), Positives = 39/40 (98%), Gaps = 0/40 (0%)
 Frame = +2

Query  81      ELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK  120
               ELNALQEELKP+GLVVLGFPCNQFGKQEPG+N EILPGLK
Sbjct  487811  ELNALQEELKPFGLVVLGFPCNQFGKQEPGENSEILPGLK  487930


 Score = 72.4 bits (176),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 34/40 (85%), Positives = 36/40 (90%), Gaps = 0/40 (0%)
 Frame = -2

Query  81      ELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK  120
               ELNALQEELKP+G+VVLGFPCNQFGKQEP  N EIL GLK
Sbjct  459055  ELNALQEELKPFGVVVLGFPCNQFGKQEPAKNSEILMGLK  458936


 Score = 70.5 bits (171),  Expect = 8e-12, Method: Compositional matrix adjust.
 Identities = 34/47 (72%), Positives = 39/47 (83%), Gaps = 0/47 (0%)
 Frame = -3

Query  115     ILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSE  161
               +L   +YVRPGGGFVP+FQLFEKGDVNGEKEQKVF+FLK S   P +
Sbjct  457797  VLLHCRYVRPGGGFVPNFQLFEKGDVNGEKEQKVFTFLKVSKDEPGK  457657


 Score = 66.2 bits (160),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 32/45 (71%), Positives = 38/45 (84%), Gaps = 3/45 (7%)
 Frame = +3

Query  109     PGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLK  153
               PG+   I+   +YVRPGGG+VP+FQLFEKGDVNGE EQKVF+FLK
Sbjct  488385  PGN---IMVHCRYVRPGGGYVPNFQLFEKGDVNGETEQKVFTFLK  488510


> NIVO01055543.1 Ammotragus lervia isolate NAZ scaffold118_len1248428_cov71, 
whole genome shotgun sequence
Length=1250577

 Score =   107 bits (267),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 54/114 (47%), Positives = 72/114 (63%), Gaps = 4/114 (4%)
 Frame = -3

Query  107    QEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSE----I  162
              QE   N+EIL  LKYVRPGGGF P+F L +K DVNG+ E  VF++LK   P+P +    +
Sbjct  19798  QENCQNEEILNSLKYVRPGGGFQPTFTLVQKCDVNGQNEHPVFAYLKDKLPYPYDDPFSL  19619

Query  163    LGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLK  216
              +   K I W PV+  D+ WNFEKFL+GP+G P  R+S      +++ DI   LK
Sbjct  19618  MTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFQTINIEPDIKRLLK  19457


 Score = 59.3 bits (142),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 34/73 (47%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
 Frame = -2

Query  39     TIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQ-YPELNALQEELKPYGLVVL  97
              + YD  AI+L+  E V F  + G+ +L  NVA+  G T + + +LN LQ    P  LVVL
Sbjct  22478  SFYDLSAISLD-GEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVL  22305

Query  98     GFPCNQFGKQEPG  110
              GFPCNQFG Q  G
Sbjct  22304  GFPCNQFGHQVRG  22266


> NIVO01038251.1 Ammotragus lervia isolate NAZ scaffold4054_len2014621_cov72, 
whole genome shotgun sequence
Length=2019647

 Score =   106 bits (264),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 45/68 (66%), Positives = 57/68 (84%), Gaps = 0/68 (0%)
 Frame = -2

Query  150      SFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKT  209
                S L++SCP  SE+LG+   + W+P+KVHDIRWNFEKFLVGPDGIP+MRW HR TV+SVK 
Sbjct  1161694  SLLQNSCPPTSELLGSPGRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWYHRTTVNSVKM  1161515

Query  210      DILAYLKQ  217
                DIL Y+++
Sbjct  1161514  DILTYMRR  1161491


 Score = 73.9 bits (180),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 34/41 (83%), Positives = 38/41 (93%), Gaps = 0/41 (0%)
 Frame = -1

Query  80       PELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK  120
                PELNALQEEL+P+GLV+LGFPCNQFGKQEPG+N EIL  LK
Sbjct  1162766  PELNALQEELEPFGLVILGFPCNQFGKQEPGENSEILATLK  1162644


 Score = 68.6 bits (166),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 33/48 (69%), Positives = 39/48 (81%), Gaps = 2/48 (4%)
 Frame = -3

Query  109      PGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSC  156
                PG + +I   L+YVRPGGGF P+FQLFEKGDVNGEKEQK ++FLK S 
Sbjct  1162233  PGTHTKIF--LRYVRPGGGFTPNFQLFEKGDVNGEKEQKFYTFLKVST  1162096


 Score = 68.6 bits (166),  Expect = 3e-11, Method: Composition-based stats.
 Identities = 30/57 (53%), Positives = 40/57 (70%), Gaps = 0/57 (0%)
 Frame = -1

Query  23       PKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQY  79
                P    ++ DCH    GTIY+Y A+ ++  EY+ FK+Y GK+ILFVNVA+Y GLT QY
Sbjct  1164146  PGAGLLQTDCHAGVGGTIYEYGALTIDGEEYIPFKRYAGKYILFVNVASY*GLTGQY  1163976


> NIVO01044831.1 Ammotragus lervia isolate NAZ scaffold59919_len4142_cov21, 
whole genome shotgun sequence
Length=4243

 Score = 79.3 bits (194),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 79/176 (45%), Gaps = 15/176 (9%)
 Frame = +3

Query  39    TIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLG  98
             ++YD     +  +E  +   Y GK +L VN A+ CGLT QY  L  L +  K  GL +LG
Sbjct  2769  SVYDIAVNTIQGDEK-TLNSYQGKVLLIVNTASKCGLTPQYEGLEKLYQAKKHQGLEILG  2945

Query  99    FPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPH  158
             FP N F  QEPG + EI            +  SF LF K  V GE +  ++  L  + P 
Sbjct  2946  FPANNFLAQEPGSDAEIQEFCSL-----NYQVSFPLFAKISVAGEDKHPLYQSLTTAIP-  3107

Query  159   PSEILG------TFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVK  208
               E +G              P    ++ WNFEKFL+   G  V R++   T    +
Sbjct  3108  --ERIGEGPWWKDLVDYGLTPNPKPEVLWNFEKFLINKQGEVVARFAPDITADDAR  3269


> NIVO01025624.1 Ammotragus lervia isolate NAZ scaffold2655_len1692532_cov72, 
whole genome shotgun sequence
Length=1691541

 Score = 65.9 bits (159),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 43/108 (40%), Positives = 53/108 (49%), Gaps = 18/108 (17%)
 Frame = +3

Query  65       LFVNVATYCGLTAQ-YPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVR  123
                L VNVA+ CG T Q Y  L  LQ +L P+   VL FPCNQFG+QEP  NKEI    +   
Sbjct  1410501  LVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRT-  1410677

Query  124      PGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISW  171
                    +  SF +F K  V G      F +L            T +S+SW
Sbjct  1410678  ----YSVSFPMFSKIAVTGTGAHPAFKYL------------TGESLSW  1410773


> NIVO01006926.1 Ammotragus lervia isolate NAZ scaffold1541_len1980868_cov73, 
whole genome shotgun sequence
Length=1979365

 Score = 57.0 bits (136),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 6/89 (7%)
 Frame = -2

Query  65       LFVNVATYCGLTAQ-YPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVR  123
                L VNVA+ C LT + Y  L  L +E  P+   VL FPCNQFG+ EP  +KE+   + + R
Sbjct  1290339  LVVNVASDCQLTDRNYLALQELHKEFGPFHFSVLAFPCNQFGESEPRPSKEV---VSFAR  1290169

Query  124      PGGGFVPSFQLFEKGDVNGEKEQKVFSFL  152
                   G   +F +F K  + G + +  F FL
Sbjct  1290168  NNFG--VTFPIFHKIKILGSEAEPAFRFL  1290088


 Score = 35.8 bits (81),  Expect = 1.6, Method: Compositional matrix adjust.
 Identities = 15/42 (36%), Positives = 23/42 (55%), Gaps = 0/42 (0%)
 Frame = -1

Query  180      RWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKTK  221
                RWNF K+LV P+G  V  W     +  ++ +I A ++Q   K
Sbjct  1286932  RWNFWKYLVNPEGQVVKSWRPEEPIEVIRPEIAALIRQMIIK  1286807


> NIVO01039413.1 Ammotragus lervia isolate NAZ scaffold335_len956507_cov73, 
whole genome shotgun sequence
Length=959672

 Score = 48.9 bits (115),  Expect = 8e-05, Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 20/106 (19%)
 Frame = -1

Query  93    GLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFL  152
              L +L FPCNQF +QEPG N EI               +   F K  VNG+    ++  +
Sbjct  4904  SLQILAFPCNQFRRQEPGSNAEI------KEFAMAIASNLVKFSKICVNGDDAHPLWKCM  4743

Query  153   KHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRW  198
             K   P    +LG            + I+WNF KFL+  +   V++W
Sbjct  4742  KIQ-PKERSMLG------------NTIKWNFTKFLIDKNSC-VVKW  4647


> NIVO01053490.1 Ammotragus lervia isolate NAZ scaffold5646_len366948_cov37, 
whole genome shotgun sequence
Length=370922

 Score = 37.4 bits (85),  Expect = 0.49, Method: Compositional matrix adjust.
 Identities = 15/28 (54%), Positives = 20/28 (71%), Gaps = 0/28 (0%)
 Frame = -2

Query  86      QEELKPYGLVVLGFPCNQFGKQEPGDNK  113
               Q++L+P    VL FPCNQ G+QEP  +K
Sbjct  111865  QQDLRPQHFSVLAFPCNQCGQQEPDSSK  111782


> NIVO01030317.1 Ammotragus lervia isolate NAZ scaffold354_len1753023_cov69, 
whole genome shotgun sequence
Length=1738398

 Score = 37.0 bits (84),  Expect = 0.61, Method: Compositional matrix adjust.
 Identities = 20/48 (42%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query  61      GKHILFVNVATYCGLT-AQYPELNALQEELKPYGLVVLGFPCNQFGKQ  107
               G   +  NVA+  G T   Y +L  L       GL +L FPCNQFG+Q
Sbjct  605819  GHVCIVTNVASQ*GKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQ  605962


> NIVO01023330.1 Ammotragus lervia isolate NAZ scaffold82_len2848312_cov70, 
whole genome shotgun sequence
Length=2852577

 Score = 35.4 bits (80),  Expect = 2.4, Method: Compositional matrix adjust.
 Identities = 13/45 (29%), Positives = 23/45 (51%), Gaps = 0/45 (0%)
 Frame = -3

Query  164      GTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVK  208
                G F++  W+P  +H + W  +   + P G P+M+  H    S +K
Sbjct  1365685  GIFQTQGWNPSLLHLLHWQADSLPLAPPGKPLMKAQHNQNNSRIK  1365551


> NIVO01053483.1 Ammotragus lervia isolate NAZ scaffold805_len3253365_cov72, 
whole genome shotgun sequence
Length=3254108

 Score = 33.9 bits (76),  Expect = 6.6, Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query  90       KPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQL  134
                 P+    LG P N+ G   P DN+ +LP    VR G G + SF L
Sbjct  3030978  SPWRCCPLGSP-NRAGSWSPADNRHLLPTWGAVRSGRGHLLSFAL  3030847


> NIVO01064217.1 Ammotragus lervia isolate NAZ scaffold1397_len268201_cov71, 
whole genome shotgun sequence
Length=267910

 Score = 33.5 bits (75),  Expect = 8.6, Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +2

Query  73     CGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEI--LPGLKYVRPGGG  127
              C  +A  P L  L+  L PY  + +GFPC   GK+      ++  +PGL    PG G
Sbjct  18443  C*TSALLPWLWHLRFYLSPYRCICMGFPCGSAGKESARSAGDLGSIPGLGR-SPGEG  18610


> NIVO01064688.1 Ammotragus lervia isolate NAZ scaffold1754_len2725468_cov71, 
whole genome shotgun sequence
Length=2734840

 Score = 33.5 bits (75),  Expect = 9.3, Method: Compositional matrix adjust.
 Identities = 21/66 (32%), Positives = 34/66 (52%), Gaps = 7/66 (11%)
 Frame = -3

Query  95       VVLGFPCNQFGKQEPGDNKE--ILPGL-KYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSF  151
                + LGFPC   GK+   + ++  ++PGL +  R G G+ P +   E    N    + +FS 
Sbjct  1290818  IFLGFPCGSAGKESARNVRDLGLIPGLGRSPREGKGYPPQYSGLE----NSMDCKVLFSS  1290651

Query  152      LKHSCP  157
                +  SCP
Sbjct  1290650  VTQSCP  1290633



Lambda      K        H        a         alpha
   0.320    0.138    0.430    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 83017649905


  Database: /cursos/20428/BI/genomes/2017/Ammotragus_lervia/genome.fa
    Posted date:  Nov 13, 2017  9:29 AM
  Number of letters in database: 2,650,836,958
  Number of sequences in database:  77,320



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40
