TBLASTN 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: /cursos/20428/BI/genomes/2017/Ammotragus_lervia/genome.fa
           77,320 sequences; 2,650,836,958 total letters



Query= SPP00000007_1.0 # Protein # Glutathione peroxidase 4 (GPx4) # Homo
sapiens # Complete

Length=197
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  NIVO01039413.1 Ammotragus lervia isolate NAZ scaffold335_len956...    196   1e-54
  NIVO01030317.1 Ammotragus lervia isolate NAZ scaffold354_len175...    173   1e-46
  NIVO01044831.1 Ammotragus lervia isolate NAZ scaffold59919_len4...  98.2    3e-21
  NIVO01025624.1 Ammotragus lervia isolate NAZ scaffold2655_len16...  84.3    2e-16
  NIVO01010626.1 Ammotragus lervia isolate NAZ scaffold727_len776...  75.1    2e-13
  NIVO01006926.1 Ammotragus lervia isolate NAZ scaffold1541_len19...  70.5    6e-12
  NIVO01055543.1 Ammotragus lervia isolate NAZ scaffold118_len124...  62.0    3e-09
  NIVO01040474.1 Ammotragus lervia isolate NAZ scaffold5206_len21...  60.5    9e-09
  NIVO01053490.1 Ammotragus lervia isolate NAZ scaffold5646_len36...  53.5    2e-06
  NIVO01038251.1 Ammotragus lervia isolate NAZ scaffold4054_len20...  43.9    0.002
  NIVO01038789.1 Ammotragus lervia isolate NAZ scaffold232_len768...  43.9    0.003
  NIVO01075636.1 Ammotragus lervia isolate NAZ scaffold3434_len12...  33.5    7.4  
  NIVO01016326.1 Ammotragus lervia isolate NAZ scaffold1378_len20...  33.1    9.0  


> NIVO01039413.1 Ammotragus lervia isolate NAZ scaffold335_len956507_cov73, 
whole genome shotgun sequence
Length=959672

 Score =   196 bits (498),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 99/170 (58%), Positives = 116/170 (68%), Gaps = 0/170 (0%)
 Frame = -1

Query  27    TMCASRDDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQXGKTEVNYTQLVDL  86
             TM AS D+W  A SM EFS K+IDG MVNLDK++           +  +        + +
Sbjct  5105  TMYASCDNWHWAHSM*EFSVKNIDGSMVNLDKHQAKYA*SPV*PRKEARQM*TTLSWLTM  4926

Query  87    HARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKW  146
             + + +EC L+ILAFPCNQF +QEPGSN EIKEFA         FSKICVNGDDAHPLWK 
Sbjct  4925  NGQCSECSLQILAFPCNQFRRQEPGSNAEIKEFAMAIASNLVKFSKICVNGDDAHPLWKC  4746

Query  147   MKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY  196
             MKIQPK + +LGN IKWNFTKFLIDKN CVVK YGPMEE L IE ++P Y
Sbjct  4745  MKIQPKERSMLGNTIKWNFTKFLIDKNSCVVKWYGPMEESLAIENNMPCY  4596


> NIVO01030317.1 Ammotragus lervia isolate NAZ scaffold354_len1753023_cov69, 
whole genome shotgun sequence
Length=1738398

 Score =   173 bits (438),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 90/145 (62%), Positives = 96/145 (66%), Gaps = 46/145 (32%)
 Frame = +2

Query  60      RGFVCIVTNVASQXGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQ-----------  108
               RG VCIVTNVASQ GKT+VNYTQLVDLHARYAECGLRILAFPCNQFG+Q           
Sbjct  605816  RGHVCIVTNVASQ*GKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQVRRGWPWVSLC  605995

Query  109     -----------------------------------EPGSNEEIKEFAAGYNVKFDMFSKI  133
                                                  EPGSN EIKEFAAGYNVKFD+FSKI
Sbjct  605996  VPLCGLGRGAVCGSRD*RGYRPLPTHPPP*PGSTQEPGSNAEIKEFAAGYNVKFDLFSKI  606175

Query  134     CVNGDDAHPLWKWMKIQPKGKGILG  158
               CVNGDDAHPLWKWMK+QPKG+G+LG
Sbjct  606176  CVNGDDAHPLWKWMKVQPKGRGMLG  606250


 Score = 69.7 bits (169),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 32/42 (76%), Positives = 34/42 (81%), Gaps = 0/42 (0%)
 Frame = +3

Query  29      CASRDDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVA  70
               CASRDDWRCARSMHEFSAKDIDG MVNLDKYR  +  +   A
Sbjct  605646  CASRDDWRCARSMHEFSAKDIDGRMVNLDKYRWVLAHLVGAA  605771


 Score = 50.4 bits (119),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 32/79 (41%), Positives = 37/79 (47%), Gaps = 28/79 (35%)
 Frame = +1

Query  147     MKIQPKGKGILGNAIKWNFT----KFLIDKNGCVVKRYGPMEEPLV--------------  188
               +++Q  G G        + T    +FLIDKNGCVVKRYGPMEEPLV              
Sbjct  606454  LRVQSHGDGRCRPLAHLSTTVASLQFLIDKNGCVVKRYGPMEEPLVGACLGSPLGGLGKS  606633

Query  189     ----------IEKDLPHYF  197
                         IEKDLP Y 
Sbjct  606634  RPSPSSPPQVIEKDLPCYL  606690


> NIVO01044831.1 Ammotragus lervia isolate NAZ scaffold59919_len4142_cov21, 
whole genome shotgun sequence
Length=4243

 Score = 98.2 bits (243),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 59/161 (37%), Positives = 83/161 (52%), Gaps = 18/161 (11%)
 Frame = +3

Query  39    RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQXGKTEVNYTQLVDLHARYAECGLRIL  98
              S+++ +   I G    L+ Y+G V ++ N AS+ G T   Y  L  L+      GL IL
Sbjct  2766  HSVYDIAVNTIQGDEKTLNSYQGKVLLIVNTASKCGLTP-QYEGLEKLYQAKKHQGLEIL  2942

Query  99    AFPCNQFGKQEPGSNEEIKEF-AAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGK---  154
              FP N F  QEPGS+ EI+EF +  Y V F +F+KI V G+D HPL++ +      +   
Sbjct  2943  GFPANNFLAQEPGSDAEIQEFCSLNYQVSFPLFAKISVAGEDKHPLYQSLTTAIPERIGE  3122

Query  155   ----------GILGNA---IKWNFTKFLIDKNGCVVKRYGP  182
                       G+  N    + WNF KFLI+K G VV R+ P
Sbjct  3123  GPWWKDLVDYGLTPNPKPEVLWNFEKFLINKQGEVVARFAP  3245


> NIVO01025624.1 Ammotragus lervia isolate NAZ scaffold2655_len1692532_cov72, 
whole genome shotgun sequence
Length=1691541

 Score = 84.3 bits (207),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 55/86 (64%), Gaps = 1/86 (1%)
 Frame = +3

Query  63       VCIVTNVASQXGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-A  121
                V +V NVAS+ G T+ +Y  L  L          +LAFPCNQFG+QEP SN+EI+ FA  
Sbjct  1410495  VSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARR  1410674

Query  122      GYNVKFDMFSKICVNGDDAHPLWKWM  147
                 Y+V F MFSKI V G  AHP +K++
Sbjct  1410675  TYSVSFPMFSKIAVTGTGAHPAFKYL  1410752


> NIVO01010626.1 Ammotragus lervia isolate NAZ scaffold727_len776514_cov66, 
whole genome shotgun sequence
Length=779037

 Score = 75.1 bits (183),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 55/81 (68%), Gaps = 1/81 (1%)
 Frame = -3

Query  94      GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKG  153
               GL IL FP N+F +QEPG  +  K    G++V F+M +KI  NGD++ P  +  ++Q K 
Sbjct  610114  GLGILVFPHNKFERQEPGRIQGSKS-TTGFHVNFEMCNKIYANGDNSPPSVEVNEVQLKV  609938

Query  154     KGILGNAIKWNFTKFLIDKNG  174
               K ++GNAIKWNF KFLIDK+ 
Sbjct  609937  KCLVGNAIKWNFPKFLIDKSA  609875


 Score = 55.8 bits (133),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 70/149 (47%), Gaps = 18/149 (12%)
 Frame = -2

Query  54      VNLDKYRGFVCIVTNVASQXGKTEVNYTQL--VDLHARYAECGLRILAFPCNQFGKQEPG  111
               +NLDKY G +CI+TNVA+Q GK ++NY Q+  +    R  E   R    P  Q  +    
Sbjct  610241  LNLDKYHGSLCILTNVAAQGGKKDLNYIQVNWMTFTVRMLEQWFRDPGLPSQQV*EAGAR  610062

Query  112     SNEEIKEFAAGY----NVKFDMFS---KICVNGDDAHPLWKWMKIQPKGKGILGNAIKWN  164
                N  IKE+        NV+ D+     +    G +  P       Q +  G  G   +  
Sbjct  610061  KNTGIKEYHRLSCQF*NVQ*DLCEWG*QPTFCGSE*SP------TQSEVPG--GKCHQME  609906

Query  165     FTKFLIDKNGCVVKRYGPMEEPLVIEKDL  193
                ++    +  CVV  YGPMEEPL IEKDL
Sbjct  609905  LSQVPH*QKRCVVTWYGPMEEPL-IEKDL  609822


> NIVO01006926.1 Ammotragus lervia isolate NAZ scaffold1541_len1980868_cov73, 
whole genome shotgun sequence
Length=1979365

 Score = 70.5 bits (171),  Expect = 6e-12, Method: Compositional matrix adjust.
 Identities = 34/86 (40%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = -2

Query  63       VCIVTNVASQXGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAA-  121
                V +V NVAS    T+ NY  L +LH  +      +LAFPCNQFG+ EP  ++E+  FA  
Sbjct  1290345  VALVVNVASDCQLTDRNYLALQELHKEFGPFHFSVLAFPCNQFGESEPRPSKEVVSFARN  1290166

Query  122      GYNVKFDMFSKICVNGDDAHPLWKWM  147
                 + V F +F KI + G +A P ++++
Sbjct  1290165  NFGVTFPIFHKIKILGSEAEPAFRFL  1290088


> NIVO01055543.1 Ammotragus lervia isolate NAZ scaffold118_len1248428_cov71, 
whole genome shotgun sequence
Length=1250577

 Score = 62.0 bits (149),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 31/74 (42%), Positives = 45/74 (61%), Gaps = 1/74 (1%)
 Frame = -2

Query  38     ARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQXGKTEVNYTQLVDLHARYAECGLRI  97
              A+S ++ SA  +DG  V+ + +RG   ++ NVAS  G T  ++TQL +L  R+    L +
Sbjct  22484  AKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFPR-RLVV  22308

Query  98     LAFPCNQFGKQEPG  111
              L FPCNQFG Q  G
Sbjct  22307  LGFPCNQFGHQVRG  22266


 Score = 37.7 bits (86),  Expect = 0.29, Method: Compositional matrix adjust.
 Identities = 35/131 (27%), Positives = 52/131 (40%), Gaps = 29/131 (22%)
 Frame = -3

Query  86     LHARYAECGLRILAFPCNQFGKQEPGSNEEIKEF------AAGYNVKFDMFSKICVNGDD  139
              LH   A   L +   P      QE   NEEI           G+   F +  K  VNG +
Sbjct  19846  LHLPLAFSKLFVSLLP------QENCQNEEILNSLKYVRPGGGFQPTFTLVQKCDVNGQN  19685

Query  140    AHPLWKWMK------------IQPKGKGILGNAIK-----WNFTKFLIDKNGCVVKRYGP  182
               HP++ ++K            +    K I+ + ++     WNF KFLI   G   +RY  
Sbjct  19684  EHPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSR  19505

Query  183    MEEPLVIEKDL  193
                + + IE D+
Sbjct  19504  TFQTINIEPDI  19472


> NIVO01040474.1 Ammotragus lervia isolate NAZ scaffold5206_len2152014_cov73, 
whole genome shotgun sequence
Length=2148920

 Score = 60.5 bits (145),  Expect = 9e-09, Method: Composition-based stats.
 Identities = 32/71 (45%), Positives = 43/71 (61%), Gaps = 1/71 (1%)
 Frame = +3

Query  39       RSMHEFSAKDI-DGHMVNLDKYRGFVCIVTNVASQXGKTEVNYTQLVDLHARYAECGLRI  97
                R+++ FSA+ +  G   +L   RG V ++ NVAS  G T  +YTQ+ DL  R    GL +
Sbjct  1832700  RTVYAFSARPLAGGEPFHLASLRGKVLLIENVASL*GTTVRDYTQMNDLQRRLGPRGLVV  1832879

Query  98       LAFPCNQFGKQ  108
                L FPCNQFG Q
Sbjct  1832880  LGFPCNQFGHQ  1832912


 Score = 46.2 bits (108),  Expect = 4e-04, Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 23/109 (21%)
 Frame = +3

Query  108      QEPGSNEEIKEF------AAGYNVKFDMFSKICVNGDDAHPLWKWMK-------------  148
                QE   NEEI           G+   F +F K  VNG+ AHPL+ +++             
Sbjct  1833171  QENAKNEEILNCLKYVRPGGGFEPNFMLFEKCEVNGEKAHPLFAFLRETLPTPSDDATAL  1833350

Query  149      -IQPK---GKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL  193
                   PK      +  N + WNF KFL+  +G  V+RY      + IE D+
Sbjct  1833351  MTDPKFITWSPVCRNDVSWNFEKFLVGPDGVPVRRYSRRFLTIDIEPDI  1833497


> NIVO01053490.1 Ammotragus lervia isolate NAZ scaffold5646_len366948_cov37, 
whole genome shotgun sequence
Length=370922

 Score = 53.5 bits (127),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 43/156 (28%), Positives = 65/156 (42%), Gaps = 15/156 (10%)
 Frame = -3

Query  28      MCASRDDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQXGKTEVNYTQLVDLH  87
               + AS    +  +      A +I G +V L KY G V  V N AS+ G         +D H
Sbjct  112020  LLASMAGMQQQQDTSNLKAVNIRGKLVLLKKYDG*VSQVVNAASKCG--------FIDQH  111865

Query  88      ARYAECGLRI-LAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKW  146
               +R       + L  P      + P +          Y+V F MFSKI V     HP +K+
Sbjct  111864  SRT*GPSTSVCLPSPATSVASRSPTAARFRALPRLTYSVPFPMFSKIAVASTGVHPAFKY  111685

Query  147     MKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP  182
               + ++  GK        W+  K+L+  +G VV  + P
Sbjct  111684  L-METSGK-----EPSWSLWKYLVAPDGKVVGAWDP  111595


> NIVO01038251.1 Ammotragus lervia isolate NAZ scaffold4054_len2014621_cov72, 
whole genome shotgun sequence
Length=2019647

 Score = 43.9 bits (102),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 22/36 (61%), Gaps = 0/36 (0%)
 Frame = -1

Query  81       TQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEI  116
                 +L  L       GL IL FPCNQFGKQEPG N EI
Sbjct  1162766  PELNALQEELEPFGLVILGFPCNQFGKQEPGENSEI  1162659


> NIVO01038789.1 Ammotragus lervia isolate NAZ scaffold232_len768847_cov70, 
whole genome shotgun sequence
Length=767384

 Score = 43.9 bits (102),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
 Frame = +2

Query  84      VDLHARYAEC---GLRILAFPCNQFGKQEPGSNEEI  116
               ++L+A   E    GL +L FPCNQFGKQEPG N EI
Sbjct  487808  IELNALQEELKPFGLVVLGFPCNQFGKQEPGENSEI  487915


 Score = 42.7 bits (99),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 19/36 (53%), Positives = 22/36 (61%), Gaps = 0/36 (0%)
 Frame = -2

Query  81      TQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEI  116
               T+L  L       G+ +L FPCNQFGKQEP  N EI
Sbjct  459058  TELNALQEELKPFGVVVLGFPCNQFGKQEPAKNSEI  458951


> NIVO01075636.1 Ammotragus lervia isolate NAZ scaffold3434_len1267231_cov72, 
whole genome shotgun sequence
Length=1271522

 Score = 33.5 bits (75),  Expect = 7.4, Method: Compositional matrix adjust.
 Identities = 12/33 (36%), Positives = 21/33 (64%), Gaps = 0/33 (0%)
 Frame = -2

Query  97      ILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDM  129
               +L FPC+++GKQ PGS+     +  G+  +F +
Sbjct  319126  VLLFPCHRWGKQAPGSDLSKPMWLQGHRTRFQI  319028


> NIVO01016326.1 Ammotragus lervia isolate NAZ scaffold1378_len2015337_cov71, 
whole genome shotgun sequence
Length=2016201

 Score = 33.1 bits (74),  Expect = 9.0, Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 0/50 (0%)
 Frame = +3

Query  123      YNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK  172
                Y++KF +  KI V   +A+ L+    ++P+G   L    +W   K LI +
Sbjct  1646505  YSIKFKLICKIVVTSKEANQLFAISLLEPEGPL*LPQGTEWAHVKVLISQ  1646654



Lambda      K        H        a         alpha
   0.324    0.140    0.457    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 63803798647


  Database: /cursos/20428/BI/genomes/2017/Ammotragus_lervia/genome.fa
    Posted date:  Nov 13, 2017  9:29 AM
  Number of letters in database: 2,650,836,958
  Number of sequences in database:  77,320



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40
