
genewise output
Score 1152.49 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00001597_2.0    1 PASSPRRPPASRFLSRPGSARSDNKALEKPPSP--PPPPRAQTSPGLGK 
                     PASSP RP ASRFLSRPG A SDN+ +EKPPSP  P PPRAQ SPG GK 
                     PASSPWRPLASRFLSRPGPAGSDNETMEKPPSPPAPAPPRAQKSPGPGK 
LZPO01017447.1:49949 cgttctcccgtctcaacgcggagagaagacctccgcgcccgcatcgcga 
                     cccccggctccgttggcgccggaaactaaccccccccccgcaaccgcga 
                     gggctggacgcgcgcaccgcgcccacgggagcgagagtaaggggcgggg 


SPP00001597_2.0   48 VGVLPNRRLGAVRGGLMSSPPGRRARLASPGTSRPSSEAREELRRRLRD 
                       V+PNRRLG VRGG MSSPPGRRARL+SPGTSR +S+AREELRRRL+D 
                     QAVVPNRRLGTVRGGQMSSPPGRRARLSSPGTSRQTSDAREELRRRLKD 
LZPO01017447.1:50096 cgggcacccgagcggcattccgccgccttcgaaccatggcggcccccag 
                     acttcaggtgctgggatccccgggcgtcccgcggaccacgaatgggtaa 
                     gaccccccgtgcccgagggagcccccggctgcccgctcccgggactgac 


SPP00001597_2.0   97 LIEGNRVMIFSKSYCPHSTR                       VKELFS 
                     LIE +RVMIFSKSYCPHS R                       VKELFS 
                     LIENHRVMIFSKSYCPHSER                       VKELFS 
LZPO01017447.1:50243 cagaccgaataaattccagaGTAGGCG  Intron 1   CAGgagctt 
                     ttaaagttttgagagcagag<0-----[50303:56350]-0>taattc 
                     ccgtcgggcccgcctaccgg                       tgacta 


SPP00001597_2.0  123 SLGVVYNILELDQV                          DGASVQEVL 
                     SLGV YNILELDQV                          DGA++QEVL 
                     SLGVDYNILELDQV          D:D[gat]        DGANIQEVL 
LZPO01017447.1:56369 ttgggtaacgcgcgGGTGAGTA  Intron 2   TAGATgggaacggc 
                     ctgtaaattataat <1-----[56412:57389]-1>  agcataatt 
                     caagctccgattat                          tgcttgagg 


SPP00001597_2.0  147 TEISNQKTVPNIFVNKVHVGGCDRTFQ                       
                     TEISNQKTVPNIFVNKVH+GGCDRTFQ                       
                     TEISNQKTVPNIFVNKVHMGGCDRTFQ                       
LZPO01017447.1:57419 agaaacaagcaatgaagcaggtgcatcGTAATGA  Intron 3      
                     catgaaactcatttaatatgggagcta<0-----[57500:58936]   
                     aactcgaacctttgtagcgtatcatcg                       


SPP00001597_2.0  174    AHQNGLLQKLLQDDSAHDYDLIIIGGGSGGLSCAK            
                        AH+NGLLQKLLQ+DSAHDYDLI+IGGGSGGLSCAK            
                        AHKNGLLQKLLQEDSAHDYDLIVIGGGSGGLSCAK            
LZPO01017447.1:58934 TAGgcaagtccacccggtgcgtgcagagggtggcttga            
                     -0>caaagttaattaaaccaaaattttgggcggtcgca            
                        atgctagggctgacgtttttccctcgctcccttag            


SPP00001597_2.0  209                        EAANLGKKVMVLDFVVPSPQGTTW   
                                            EAANLGKKVMVLD+ +     T+    
                                            EAANLGKKVMVLDLAL!----TSR   
LZPO01017447.1:59042 GTGTGAA  Intron 4   TAGgggatgaagagcgcgc4    ata   
                     <0-----[59042:59229]-0>accatgaattttatct     ccg   
                                            atccgaggcggacggc     ata   


SPP00001597_2.0  233                           LGGTCVNVGCIPKKLMHQAALLG 
                                               LGGTCVNVGCIPKKLMHQAALLG 
                               G:C[tgc]        LGGTCVNVGCIPKKLMHQAALLG 
LZPO01017447.1:59291 TGTGTATA  Intron 5   CAGGCcggatgaggtacaacaccggccg 
                      <1-----[59292:61154]-1>  tggcgtatggtcaattaaccttg 
                                               tccctatgctttggggcgaccgg 


SPP00001597_2.0  257 HALQDAKKYGWEYNQQ                          KHNWEAM 
                      ALQD++K+GW+YNQQ                          +HNWE+M 
                     QALQDSRKFGWDYNQQ          V:V[gtg]        RHNWESM 
LZPO01017447.1:61226 cgtcgtaatgtgtaccGGTGAGTG  Intron 6   TAGTGacatgta 
                     actaacgatggaaaaa <1-----[61275:67183]-1>  gaagact 
                     gcggcggaccgttcgg                          accggcg 


SPP00001597_2.0  281 TEAIQSHIGSLNWGYRVTLREKGVTYVNSFGEFVDLHKIK          
                     TEAIQ+HI SLNWGYR+TLREKGV YVNS+GEFV+ HKIK          
                     TEAIQNHISSLNWGYRLTLREKGVAYVNSYGEFVEPHKIK          
LZPO01017447.1:67207 aggacacaattatgtacaccgagggtgattggtggccaaa          
                     cactaaatgctaggagtctgaagtcatacagattacaata          
                     aagcgcccccgcgctggctggatgctccctcgttgataag          


SPP00001597_2.0  321                        ATNKKGQETFYTASKFVIATGERPRY 
                                            ATNKKGQETFYTASKFVIATGERPRY 
                                            ATNKKGQETFYTASKFVIATGERPRY 
LZPO01017447.1:67327 GTACTGC  Intron 7   AAGgaaaagcgattagtatgagaggacct 
                     <0-----[67327:68799]-0>ccaaagaactacccatttccgagcga 
                                            actgaagattcttcgtcaaatagagc 


SPP00001597_2.0  347 LGIQGDKEYCIT                          DDLFSLPYCPG 
                     LGIQ DKEYCIT                          DDLFSLPYCPG 
                     LGIQQDKEYCIT           S:S[agt]       DDLFSLPYCPG 
LZPO01017447.1:68878 tgaccgagttaaAGGTAAGAG  Intron 8   CAGTggcttccttcg 
                     tgtaaaaaagtc  <2-----[68916:70475]-2> aattctcagcg 
                     gacaatgactta                          cctctggcctc 


SPP00001597_2.0  371 CTLVVGASYVGLECAGFLAGLGLDVTVMVRSVLLRGFDQEMAEKVGSYL 
                      TLVVGASYVGLECAGFLAGLGLDVTVMVRSVLLRGFDQEMAEKVGSYL 
                     RTLVVGASYVGLECAGFLAGLGLDVTVMVRSVLLRGFDQEMAEKVGSYL 
LZPO01017447.1:70510 catggggttggcgtggtcggtgtggagagctgcccgtgcgaggaggttc 
                     gctttgccatgtagcgttcgtgtatctttgctttggtaaatcaatgcat 
                     aaacaccgtttggtggtgtcgaatggtgactctttcttaagagagaccg 


SPP00001597_2.0  420 EQQGVKFQRKFTPILV                          QLEKGLP 
                     EQ GVKFQRKFTP+L                             EK+ P 
                     EQHGVKFQRKFTPVLA          Q:M[atg]        --EKxSP 
LZPO01017447.1:70657 gccggatcaatacgtgAGTCTGGG  Intron 9   AAGTG  gagtc 
                     aaagtatagatccttc <1-----[70706:71729]-1>    aagcc 
                     aatccgcggaccttga                            gaNat 


SPP00001597_2.0  444 GKLKVVAKSTEGPETVEGIYNT                       VLLA 
                     G LKVVAKSTEGPETVEGIYNT                       VLLA 
                     GTLKVVAKSTEGPETVEGIYNT                       VLLA 
LZPO01017447.1:71747 gatagggataggcgagggataaGTGAGTG  Intron 10  CAGgttg 
                     gctattcaccagcactagtaac<0-----[71813:78295]-0>tttc 
                     aggatgtgctaagaataaaccg                       tgaa 


SPP00001597_2.0  470 IGRDSCTRKIGLEKIGVKINE                          NG 
                     IGR+SCT+KIGLEKIGVKINE                           G 
                     IGRESCTKKIGLEKIGVKINE           K:R[agg]       TG 
LZPO01017447.1:78308 agcgttaaaagcgaaggaaagAGGTAAGTG  Intron 11  CAGGag 
                     tggacgcaatgtaatgtataa  <2-----[78373:78836]-2> cg 
                     tttactagaaggggcgcactg                          tt 


SPP00001597_2.0  494 KIPVNDVEQTNVPHVYAIGDILDGKPELTPVAIQAGKLLARRLFGVSLE 
                     KIPVNDVEQTNVPH+YA+GDIL+GKPELTPVAIQAGKLLARRLFG SLE 
                     KIPVNDVEQTNVPHIYAVGDILEGKPELTPVAIQAGKLLARRLFGTSLE 
LZPO01017447.1:78844 aacgagggcaagccatggggacggacgcacggacggaccgcactgattg 
                     atctaataacatcatactgattagacatcctctacgattcggttgccta 
                     aaaattgagccgtcctttgcaggcacgcattctgacggataactgctga 


SPP00001597_2.0  543 K                       CDYINIPTTVFTPLEYGCCGLSEEK 
                     K                       CDYIN+PTTVFTPLEYGCCGLSEEK 
                     K                       CDYINVPTTVFTPLEYGCCGLSEEK 
LZPO01017447.1:78991 aGTAAGGT  Intron 12  CAGtgtaagcaagtaccgtgttgctgga 
                     a<0-----[78994:81106]-0>gaatatcccttcctaaggggtcaaa 
                     g                       ttctccaaggcatgatcctggtaga 


SPP00001597_2.0  569 AIEMYKKENLE                       VYHTLFWPLEWTVAG 
                     AIE+YKKENLE                       VYHTLFWPLEWTVAG 
                     AIEVYKKENLE                       VYHTLFWPLEWTVAG 
LZPO01017447.1:81182 gaggtaagacgGTAAGGA  Intron 13  CAGgtcatttccgtaggg 
                     ctataaaaata<0-----[81215:81941]-0>taacttgctagctcg 
                     ccagtaagtga                       gtccgcgtgggactc 


SPP00001597_2.0  595 RDNNTCYAKIICNKFDN                       ERVVGFHLL 
                     RD+NTCYAKIICNK DN                       ERVVGFHLL 
                     RDSNTCYAKIICNKCDN                       ERVVGFHLL 
LZPO01017447.1:81987 agaaattgaaataatgaGTATGTA  Intron 14  TAGgcgggtccc 
                     gagacgacattgaagaa<0-----[82038:83044]-0>agttgtatt 
                     acctcttagacccacct                       gtggatctg 


SPP00001597_2.0  621 GPNAGEITQGFAAAMKCGLTKQLLDDTIGIHPTCGE              
                     GPNAGEITQGFAAAMKCGLTKQLL+DTIGIHPTCGE              
                     GPNAGEITQGFAAAMKCGLTKQLLNDTIGIHPTCGE              
LZPO01017447.1:83072 gcagggaacgtgggaatgcaacccagaagaccatgg              
                     gcacgatcagtccctaggtcaattaactgtaccgga              
                     gatttacagatatagatgcaggagtcctacttattg              


SPP00001597_2.0  657                        VFTTLEITKSSGLDITQKGC       
                                            +FTTLEITKSSGLD+TQKGC       
                                            xFTTLEITKSSGLDVTQKGC       
LZPO01017447.1:83180 GTAAGAA  Intron 15  CAGgtaatgaaattgcggacagt       
                     <0-----[83180:83771]-0>ttcctatcaccgtatcaagg       
                                            Ntaagacagcaggcttgacc       


//
Making a D in phase 1 intron
Making a C in phase 1 intron
Making a V in phase 1 intron
Making a S in phase 2 intron
Making a M in phase 1 intron
Making a R in phase 2 intron
>LZPO01017447.1:subseq(69853,131946).pep
PASSPWRPLASRFLSRPGPAGSDNETMEKPPSPPAPAPPRAQKSPGPGKQAVVPNRRLGT
VRGGQMSSPPGRRARLSSPGTSRQTSDAREELRRRLKDLIENHRVMIFSKSYCPHSERVK
ELFSSLGVDYNILELDQVDDGANIQEVLTEISNQKTVPNIFVNKVHMGGCDRTFQAHKNG
LLQKLLQEDSAHDYDLIVIGGGSGGLSCAKEAANLGKKVMVLDLALXTSRCLGGTCVNVG
CIPKKLMHQAALLGQALQDSRKFGWDYNQQVRHNWESMTEAIQNHISSLNWGYRLTLREK
GVAYVNSYGEFVEPHKIKATNKKGQETFYTASKFVIATGERPRYLGIQQDKEYCITSDDL
FSLPYCPGRTLVVGASYVGLECAGFLAGLGLDVTVMVRSVLLRGFDQEMAEKVGSYLEQH
GVKFQRKFTPVLAMEKxSPGTLKVVAKSTEGPETVEGIYNTVLLAIGRESCTKKIGLEKI
GVKINERTGKIPVNDVEQTNVPHIYAVGDILEGKPELTPVAIQAGKLLARRLFGTSLEKC
DYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEVYHTLFWPLEWTVAGRDSNTCYAKI
ICNKCDNERVVGFHLLGPNAGEITQGFAAAMKCGLTKQLLNDTIGIHPTCGExFTTLEIT
KSSGLDVTQKGC
//
>LZPO01017447.1:subseq(69853,131946).[49949:59277].sp
CCGGCGTCGTCCCCTTGGCGGCCACTCGCGTCCCGGTTCCTGAGCAGACCCGGCCCGGCC
GGGAGCGACAACGAAACCATGGAGAAGCCACCGTCCCCGCCAGCGCCAGCGCCTCCACGA
GCGCAGAAGTCGCCCGGGCCGGGGAAGCAGGCAGTCGTCCCCAACCGCCGCCTGGGTACG
GTCCGCGGCGGGCAAATGTCGTCGCCACCGGGCCGCCGCGCCCGCCTGTCGTCCCCTGGG
ACCAGCCGCCAGACCTCTGACGCCCGCGAGGAGCTGCGACGCCGTCTGAAAGACCTCATC
GAGAATCACCGGGTGATGATCTTCAGCAAGAGCTACTGTCCACACAGCGAGAGGGTTAAG
GAACTCTTTTCATCCTTAGGAGTGGACTATAACATCCTGGAACTTGATCAAGTTGATGAT
GGGGCCAATATTCAGGAAGTGCTGACAGAAATCAGTAACCAGAAAACAGTCCCCAATATT
TTTGTGAATAAAGTGCACATGGGTGGATGTGACCGAACTTTCCAGGCACATAAGAACGGT
TTACTGCAGAAGCTCCTTCAGGAAGACTCGGCTCATGATTATGATCTCATCGTCATTGGC
GGGGGCTCTGGCGGCCTCTCTTGTGCAAAGGAAGCTGCCAACTTGGGAAAGAAGGTCATG
GTGCTAGACCTGGCGCTC
>LZPO01017447.1:subseq(69853,131946).[59282:83831].sp
ACATCTAGATGCCTTGGCGGCACCTGTGTAAATGTGGGCTGTATTCCTAAGAAGCTGATG
CACCAGGCAGCCCTCCTGGGGCAGGCCTTGCAGGACTCGAGGAAATTCGGCTGGGATTAT
AACCAGCAGGTGAGACACAACTGGGAGTCCATGACAGAAGCGATCCAGAACCACATCAGC
TCCTTGAACTGGGGCTATAGGCTGACCCTTCGGGAGAAAGGTGTGGCCTATGTCAACTCC
TATGGCGAGTTTGTTGAGCCACATAAAATAAAGGCAACCAATAAGAAAGGACAGGAAACT
TTTTACACTGCTTCCAAGTTTGTCATAGCAACAGGTGAAAGGCCACGGTACTTGGGAATC
CAACAAGATAAGGAATACTGTATTACAAGTGACGACCTTTTCTCTCTGCCGTACTGCCCT
GGCCGAACATTAGTCGTAGGCGCCTCGTATGTTGGTCTGGAGTGTGCGGGGTTTCTGGCT
GGCTTGGGATTAGATGTGACGGTTATGGTACGCTCTGTCCTTCTTCGTGGCTTTGATCAA
GAAATGGCAGAGAAAGTGGGATCCTACCTGGAACAACATGGCGTCAAGTTCCAGAGGAAA
TTCACCCCTGTTTTGGCAATGGAGAAAGGNTCACCTGGAACGTTGAAAGTTGTGGCTAAG
TCCACTGAAGGACCGGAAACAGTTGAAGGAATATACAACACGGTTTTGTTAGCAATTGGT
CGTGAATCCTGTACAAAGAAAATAGGGCTGGAGAAGATCGGGGTCAAAATCAATGAGAGG
ACTGGTAAAATACCAGTAAATGATGTGGAACAGACCAACGTGCCTCACATCTATGCTGTT
GGGGACATACTGGAGGGCAAACCCGAGCTCACACCTGTTGCCATTCAGGCAGGCAAGCTG
CTAGCTCGAAGACTCTTTGGGACCTCTTTGGAAAAGTGTGATTACATTAACGTCCCAACA
ACGGTGTTCACACCTCTGGAATATGGCTGCTGTGGGCTGTCTGAAGAGAAAGCCATCGAA
GTGTATAAAAAAGAGAATCTGGAAGTGTATCACACCTTGTTCTGGCCTCTGGAGTGGACA
GTCGCTGGCAGAGACAGCAATACCTGTTATGCAAAGATAATCTGCAACAAATGCGACAAT
GAGCGTGTGGTGGGATTTCACCTTCTGGGGCCAAATGCTGGTGAAATCACACAGGGATTT
GCAGCTGCAATGAAATGTGGGCTCACAAAGCAGCTACTGAATGACACCATTGGAATCCAT
CCTACATGTGGTGAGGTNTTTACAACATTGGAAATCACAAAGTCCTCAGGGCTGGACGTT
ACTCAGAAAGGCTGC
//
LZPO01017447.1:subseq(69853,131946)	GeneWise	match	49949	59277	356.30	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-1
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	49949	50302	0.00	+	0	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-1
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	50303	56350	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-1
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	56351	56411	0.00	+	0	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-1
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	56412	57389	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-1
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	57390	57499	0.00	+	2	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-1
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	57500	58936	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-1
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	58937	59041	0.00	+	0	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-1
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	59042	59229	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-1
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	59230	59277	0.00	+	0	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-1
LZPO01017447.1:subseq(69853,131946)	GeneWise	match	59282	83831	806.18	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	59282	59291	0.00	+	0	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	59292	61154	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	61155	61274	0.00	+	2	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	61275	67183	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	67184	67326	0.00	+	2	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	67327	68799	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	68800	68915	0.00	+	0	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	68916	70475	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	70476	70705	0.00	+	1	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	70706	71729	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	71730	71812	0.00	+	2	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	71813	78295	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	78296	78372	0.00	+	0	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	78373	78836	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	78837	78993	0.00	+	1	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	78994	81106	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	81107	81214	0.00	+	0	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	81215	81941	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	81942	82037	0.00	+	0	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	82038	83044	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	83045	83179	0.00	+	0	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	intron	83180	83771	0.00	+	.	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
LZPO01017447.1:subseq(69853,131946)	GeneWise	cds	83772	83831	0.00	+	0	LZPO01017447.1:subseq(69853,131946)-genewise-prediction-2
//
