
genewise output
Score 576.65 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00001595_2.0    6 CWLYFPASRGRTFVQTVWVAPTCPNCCWFPGFLPPVPRPPHVPRVLLRG 
                     CWL  PASRGR FVQTVWVA TCPNCCWFPGFL PV +P   PRVLLRG 
                     CWLCSPASRGRPFVQTVWVAQTCPNCCWFPGFLSPVSQPLCxPRVLLRG 
LZPO01034884.1-69535 ttcttcgtcgactgcagtggcatcattttcgtctcgtccctgccgccag 
                     ggtgccccgggcttactgtcacgcagggtcgttcctcactgccgtttgg 
                     cggccactatattgggcggggtccctcgtattctaccgagtNcgggggc 


SPP00001595_2.0   55 PRGAVLPASRPSKTLPSSSQTPCPTDPCICPPPSTPDSRQEKNTQSEL  
                      RGAVLP S  S   PS+SQTPC TDP +CPPPSTPD RQEKNTQS L  
                     TRGAVLPPSHSSAAPPSTSQTPCSTDPRLCPPPSTPDCRQEKNTQSGL  
LZPO01034884.1-69388 acgggccctcttggcctatcacttagccctccctacgtacgaaactgc  
                     cggcttcccacccccccccaccgccacgtgccccccaggaaaacacgt  
                     ttgtgtttattcgactcatggctttcctcctactatttgggatagtgg  


SPP00001595_2.0  103                        PNKKGQLQKLPTMNGSKDPPGSYDFD 
                                            P++KGQLQKLPTMN S+DPPGSYDFD 
                                            PDQKGQLQKLPTMNSSEDPPGSYDFD 
LZPO01034884.1-69244 GTAAGTT  Intron 1   TAGcgcagcccaccaaaatggccgttgtg 
                     <0-----[69244:67829]-0>caaagataatcctagcaaccgcaata 
                                            ttaacatgggaagcctgtccgctccc 


SPP00001595_2.0  129 LIIIGGGSGGLAAAK                       ARLSAAKFDKK 
                     LIIIGGGSGGLAAAK                           AAKFDKK 
                     LIIIGGGSGGLAAAK                       E---AAKFDKK 
LZPO01034884.1-67750 caaagggtggcgggaGTAAGGC  Intron 2   CAGg   ggatgaa 
                     ttttgggcggtccca<0-----[67705:66774]-0>a   ccataaa 
                     tcctaacaaagaatg                       g   acatcgg 


SPP00001595_2.0  155 VLVLDFVTPTPLGTRW                          LGGTCVN 
                     VLVLDFVTPTPLGTRW                          LGGTCVN 
                     VLVLDFVTPTPLGTRW          G:G[ggt]        LGGTCVN 
LZPO01034884.1-66749 gcgtgtgacaccgaatGGTGAGCT  Intron 3   CAGGTcggatga 
                     ttttattcccctgcgg <1-----[66700:65108]-1>  tggcgta 
                     ggcgttcaatttctag                          caaatgc 


SPP00001595_2.0  179 VGCIPKKLMHQAALLGQALKDSRNYGWKVEDT                  
                     VGCIPKKLMHQAALLGQALKDSRNYGWKVEDT                  
                     VGCIPKKLMHQAALLGQALKDSRNYGWKVEDT                  
LZPO01034884.1-65084 ggtacaacaccggttgcgcagtcatgtaggga                  
                     tggtcaattaaccttgactaacgaaggataac                  
                     ggcataaggcggtgaaacgacacctagacgca                  


SPP00001595_2.0  211                           KHDWEKMTESVQSHIGSLNWGYR 
                                                    K+        GSL      
                               V:V[gtg]        PFTTCKVPR------GSL----- 
LZPO01034884.1-64988 GGTGTGGC  Intron 4   GAGTGctaatagca      gac      
                      <1-----[64987:62374]-1>  ctccgatcg      ggt      
                                               cttctgtgg      ttt      


SPP00001595_2.0  235 VALREKKVVYENAYGRFIGPHRIVATNNKGKEKIYSAERFLIATGERPR 
                             V E      +    + ATNNKGKEKIYSAERFLIATGERPR 
                     --------VLE------LTLFPLQATNNKGKEKIYSAERFLIATGERPR 
LZPO01034884.1-62335         gcg      cattctcgaaaagagaattggctcagaggacc 
                             tta      tcttctaccaaagaaataccagtttccgagcg 
                             aga      gagttggcatcaaaaattaaggtcccttagac 


SPP00001595_2.0  284 YLGIPGDKEYCIS                          DDLFSLPYCP 
                     YLGIPGDK+YCIS                          + L++      
                     YLGIPGDKDYCIS           S:R[agg]       NVLYNKCGRV 
LZPO01034884.1-62230 tcgacggagttaaAGGTGGGTG  Intron 5   CAGGagttaatgcg 
                     atgtcgaaaagtg  <2-----[62189:61925]-2> attaaagggt 
                     cgcctacaccccc                          ttgctgttta 


SPP00001595_2.0  308 GKTLVVGASYVALECAGFLAGIGLDVTVMVR                   
                      +        V+L   G     GL +  + R                   
                     CRFNFCKGRIVSLLAVGKYKLKGLALMAIHR                   
LZPO01034884.1-61893 tatattagaagtttgggatacagcgcagaca                   
                     ggtatgaggttcttctgaaatagtcttctag                   
                     tgtttcaagcgcgagaggcagaaatagccta                   


SPP00001595_2.0  339                           ILLRGFDQDMANKIGEHMEEHGI 
                                               +    +   +  +  +        
                               S:G[ggg]        LSSVSLRAKQIERQRDSCSPCPC 
LZPO01034884.1-61800 GGTTTGTA  Intron 6   CAGGGcatgtcagacagacagattctct 
                      <1-----[61799:57011]-1>  tgctctgcaatagagaggccgcg 
                                               gttgaggaggaaggacctctcgt 


SPP00001595_2.0  363 KFIRQFVP-TKIEQIEAGTPGRLRVTAQSTNSEETIEGEFNT        
                      ++R  +    +EQIEAGTPGRLRVT+QST SEET+EGE+NT        
                     LYLRARLDCF!VEQIEAGTPGRLRVTSQSTTSEETxEGEYNT        
LZPO01034884.1-56939 cttagacgtt5ggcagggacgccagatctaaaggaagggtaa        
                     tatgcgtagt taatacgccggtgtccacccgaactagaaac        
                     ctaaaattct taataagaacacggttgccctagcNaaatca        


SPP00001595_2.0  404                        VLLAVGRDSCTRTIGLETVGVKINE  
                                            VLLAVGRDSCTRTIGLETVGV INE  
                                            VLLAVGRDSCTRTIGLETVGVTINE  
LZPO01034884.1-56811 GTAAGGT  Intron 7   CAGgtcgggagttaaaagtgagggaaag  
                     <0-----[56811:56247]-0>tttctggacgcgctgtactgtctaa  
                                            gggaaaatttgattcagagcggata  


SPP00001595_2.0  429                           TGKIPVTDEEQTNVPYIYAIGDI 
                                                   P++          +A   + 
                                K:N[aat]       ----PLSSWWGA---WQHATDMV 
LZPO01034884.1-56171 AAGTAAGGA  Intron 8   TAGT    ctttttgg   tccgagag 
                       <2-----[56169:54450]-2>     ctccgggc   gaaccatt 
                                                   aaaaggaa   ggtaacgg 


SPP00001595_2.0  453 LEGKLELTPVAIQA--GRLLA-QRLYGGSNVKCDYDNVPTTVFTPLEYG 
                     LE +L +  + +QA  G  L+   L G S+        P  ++ PL  G 
                     LEKELRVLYLDLQATDGHSLSICDLKGHSHSDxLPSTRPHLLIVPLLMG 
LZPO01034884.1-54400 cgagcagctcgccgaggcataatgcagcacagacctaaccccagcccag 
                     taaatgttatataccagagtgtgatagagagaNtcccgcattttctttg 
                     gggggacattttgaatgtcgcctccacccttcattaagaccaagactgc 


SPP00001595_2.0  499 CCGLS                          EKAVEKFGEENIEVYHSF 
                                                          F      VYHSF 
                     QAFKH           E:N[aat]       PNCACVF-----QVYHSF 
LZPO01034884.1-54253 cgtacAAGTCTATT  Intron 9   CAGTcatgtgt     cgtcat 
                     actaa  <2-----[54236:53005]-2> cagcgtt     ataagt 
                     aacac                          actttcc     gtcccc 


SPP00001595_2.0  523 FWPLEWTVPSRDNNKCYAKIICNLKDD                       
                     FWPLEWTVPSRDNNKCYAKIICNL+D+                       
                     FWPLEWTVPSRDNNKCYAKIICNLQDN                       
LZPO01034884.1-52964 ttctgtagctcgaaattgaaataccgaGTAAGTA  Intron 10     
                     tgctagctccgaaaagacattgataaa<0-----[52883:50147]   
                     tgagagatgcacccattcaaccttacc                       


SPP00001595_2.0  550    ERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDSTIGIHPVCAE  
                        ERVVGFHVLGP+AGEVTQGFAAALKCGLTK+QLDSTIGIHPVCAE  
                        ERVVGFHVLGPxAGEVTQGFAAALKCGLTKEQLDSTIGIHPVCAE  
LZPO01034884.1-50149 TAGgcgggtcgcgcaggggacgtgggcatgcaagccgaaagaccgtgg  
                     -0>agttgtattgcacgatcagtccctaggtcaaatagctgtactgca  
                        gtcgcttggtgNtaagggccatacgtagcgggccctttcctctgg  


SPP00001595_2.0  595                        IFTTLSVTKRSGGDILQSGC       
                                            IFTTLSVTKRSGGDILQSGC       
                                            IFTTLSVTKRSGGDILQSGC       
LZPO01034884.1-50011 GTGAGTC  Intron 11  CAGataattgaactgggacctgt       
                     <0-----[50011:43557]-0>ttcctctcagcggattacgg       
                                            accggggtgtttacccgtcc       


//
Making a G in phase 1 intron
Making a V in phase 1 intron
Making a R in phase 2 intron
Making a G in phase 1 intron
Making a N in phase 2 intron
Making a N in phase 2 intron
>LZPO01034884.1:subseq(467901,105205).pep
CWLCSPASRGRPFVQTVWVAQTCPNCCWFPGFLSPVSQPLCxPRVLLRGTRGAVLPPSHS
SAAPPSTSQTPCSTDPRLCPPPSTPDCRQEKNTQSGLPDQKGQLQKLPTMNSSEDPPGSY
DFDLIIIGGGSGGLAAAKEAAKFDKKVLVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH
QAALLGQALKDSRNYGWKVEDTVPFTTCKVPRGSLVLELTLFPLQATNNKGKEKIYSAER
FLIATGERPRYLGIPGDKDYCISRNVLYNKCGRVCRFNFCKGRIVSLLAVGKYKLKGLAL
MAIHRGLSSVSLRAKQIERQRDSCSPCPCLYLRARLDCFXVEQIEAGTPGRLRVTSQSTT
SEETxEGEYNTVLLAVGRDSCTRTIGLETVGVTINENPLSSWWGAWQHATDMVLEKELRV
LYLDLQATDGHSLSICDLKGHSHSDxLPSTRPHLLIVPLLMGQAFKHNPNCACVFQVYHS
FFWPLEWTVPSRDNNKCYAKIICNLQDNERVVGFHVLGPxAGEVTQGFAAALKCGLTKEQ
LDSTIGIHPVCAEIFTTLSVTKRSGGDILQSGC
//
>LZPO01034884.1:subseq(467901,105205).[69535:56908].sp
TGCTGGCTGTGCTCCCCAGCCTCTCGAGGTAGACCTTTTGTGCAGACGGTCTGGGTGGCG
CAGACTTGCCCCAACTGTTGCTGGTTTCCAGGTTTTCTCTCTCCAGTCTCCCAGCCACTG
TGTGCNCCCCGGGTGCTGCTGAGGGGCACTCGTGGGGCTGTGCTTCCTCCTTCACATTCT
TCCGCGGCACCCCCTTCCACATCTCAGACGCCCTGTTCTACTGACCCCCGTCTCTGCCCT
CCACCCTCTACACCTGATTGTAGGCAGGAGAAAAATACACAGTCTGGGCTGCCTGATCAA
AAAGGCCAACTTCAGAAGCTGCCAACAATGAACAGCTCTGAGGATCCCCCCGGGTCCTAT
GACTTCGACCTTATCATCATTGGAGGAGGCTCAGGAGGACTGGCAGCAGCTAAGGAGGCA
GCCAAATTTGACAAGAAGGTGCTGGTCTTGGATTTTGTCACACCAACTCCTCTTGGCACT
AGATGGGGTCTCGGAGGAACATGTGTGAACGTGGGGTGCATACCTAAAAAACTGATGCAC
CAGGCGGCTTTGTTAGGACAAGCCCTGAAAGACTCACGCAACTATGGATGGAAAGTCGAG
GACACAGTGCCCTTTACTACCTGTAAGGTTCCGAGGGGTAGTCTTGTACTGGAACTGACA
TTGTTTCCTTTGCAGGCCACAAATAACAAAGGAAAAGAAAAAATTTATTCAGCAGAGCGG
TTTCTCATCGCCACTGGTGAAAGGCCACGCTACCTGGGCATCCCTGGAGACAAAGACTAC
TGCATCAGCAGGAATGTTTTGTACAATAAGTGTGGTCGTGTATGTAGGTTTAATTTTTGC
AAAGGAAGGATCGTGTCCTTGTTAGCGGTAGGGAAGTACAAACTGAAAGGACTAGCTCTA
ATGGCCATCCATAGAGGGCTGAGTTCTGTGTCACTGAGGGCAAAGCAGATAGAAAGGCAG
AGAGACAGCTGTTCCCCTTGCCCGTGTCTCTATTTAAGAGCAAGACTTGATTGCTTT
>LZPO01034884.1:subseq(467901,105205).[56904:43495].sp
GTTGAACAAATTGAAGCAGGGACACCAGGCCGACTCAGGGTGACTTCTCAGTCCACCACC
AGTGAAGAGACCATNGAAGGAGAATATAACACAGTGTTGCTGGCAGTAGGAAGAGATTCT
TGTACGAGAACTATTGGCTTAGAGACAGTGGGCGTGACGATAAATGAAAATCCATTATCA
TCATGGTGGGGAGCATGGCAGCATGCAACAGACATGGTGCTGGAGAAGGAGCTGAGAGTC
CTATATCTTGATCTTCAGGCAACAGATGGGCATAGCTTGAGCATCTGTGACCTCAAAGGC
CACAGCCATAGTGACANACTTCCTTCAACAAGGCCACACCTCCTAATAGTGCCACTCCTT
ATGGGCCAAGCATTCAAACACAATCCAAACTGTGCTTGTGTCTTCCAGGTTTACCACAGC
TTCTTTTGGCCATTGGAATGGACAGTTCCGTCCCGAGACAACAACAAATGTTATGCCAAA
ATAATCTGCAATCTTCAAGACAACGAGCGTGTCGTGGGCTTTCATGTGCTGGGTCCGAAN
GCTGGAGAAGTGACGCAGGGCTTCGCAGCTGCACTCAAGTGTGGACTGACCAAGGAGCAG
CTCGACAGCACTATTGGTATCCACCCTGTCTGTGCGGAGATATTCACCACGTTGTCGGTG
ACTAAGCGTTCTGGTGGAGACATCCTCCAGTCTGGCTGC
//
LZPO01034884.1:subseq(467901,105205)	GeneWise	match	69535	56910	371.17	-	.	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	cds	69535	69245	0.00	-	0	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	intron	69244	67829	0.00	-	.	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	cds	67828	67706	0.00	-	0	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	intron	67705	66774	0.00	-	.	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	cds	66773	66701	0.00	-	0	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	intron	66700	65108	0.00	-	.	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	cds	65107	64988	0.00	-	2	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	intron	64987	62374	0.00	-	.	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	cds	62373	62190	0.00	-	2	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	intron	62189	61925	0.00	-	.	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	cds	61924	61800	0.00	-	1	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	intron	61799	57011	0.00	-	.	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	cds	57010	56910	0.00	-	2	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-1
LZPO01034884.1:subseq(467901,105205)	GeneWise	match	56904	43497	239.42	-	.	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-2
LZPO01034884.1:subseq(467901,105205)	GeneWise	cds	56904	56812	0.00	-	0	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-2
LZPO01034884.1:subseq(467901,105205)	GeneWise	intron	56811	56247	0.00	-	.	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-2
LZPO01034884.1:subseq(467901,105205)	GeneWise	cds	56246	56170	0.00	-	0	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-2
LZPO01034884.1:subseq(467901,105205)	GeneWise	intron	56169	54450	0.00	-	.	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-2
LZPO01034884.1:subseq(467901,105205)	GeneWise	cds	54449	54237	0.00	-	1	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-2
LZPO01034884.1:subseq(467901,105205)	GeneWise	intron	54236	53005	0.00	-	.	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-2
LZPO01034884.1:subseq(467901,105205)	GeneWise	cds	53004	52884	0.00	-	1	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-2
LZPO01034884.1:subseq(467901,105205)	GeneWise	intron	52883	50147	0.00	-	.	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-2
LZPO01034884.1:subseq(467901,105205)	GeneWise	cds	50146	50012	0.00	-	0	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-2
LZPO01034884.1:subseq(467901,105205)	GeneWise	intron	50011	43557	0.00	-	.	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-2
LZPO01034884.1:subseq(467901,105205)	GeneWise	cds	43556	43497	0.00	-	0	LZPO01034884.1:subseq(467901,105205)-genewise-prediction-2
//
