
genewise output
Score 217.19 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00001582_2.0    1 MSFCSFFGGEVFQNHFEP                          VYVCA 
                     MSFCSFFGGEVFQNHFEP                          VYVCA 
                     MSFCSFFGGEVFQNHFEP          G:G[ggt]        VYVCA 
LZPO01017331.1-45551 atttattggggtcactgcGGTACAGC  Intron 1   CAGGTgtgtg 
                     tctggttggattaaatac <1-----[45496:42258]-1>  tatgc 
                     ggcccccacgtcgtccga                          ctgtc 


SPP00001582_2.0   25 KCSYELFSSHSKYAHSSPWPAFTETIHPDSVTKCPEKNRPEALK      
                     KC YELFSSHSKYAHSSPWPAFTETIH DSVTK PEKNRPEALK      
                     KCGYELFSSHSKYAHSSPWPAFTETIHADSVTKRPEKNRPEALK      
LZPO01017331.1-42240 atgtgtttactatgcttctcgtagaacggagaaccgaaccggta      
                     aggaattcgacaacacccgcctcactacagtcagcaaagcacta      
                     gtccggccccagtactcggaactacctactccgctgacatatag      


SPP00001582_2.0   69                        VSCGKCGNGLGHEFLNDGPKRGQSRF 
                                            VSCGKCGNGLGHEFLNDGPKRGQSRF 
                                            VSCGKCGNGLGHEFLNDGPKRGQSRF 
LZPO01017331.1-42108 GTGGGTG  Intron 2   CAGgttgatgagtgcgtcaggcacgctct 
                     <0-----[42108:41677]-0>tcggaggagtgaattaagcaggacgt 
                                            gctcgtctggccgcgttccggaacac 


SPP00001582_2.0   95 UIFSSSLKFVPK                          KEAAASQGH   
                      IFSSSLKF+PK                          +EA ASQGH   
                     XIFSSSLKFIPK          G:G[ggc]        REAPASQGH   
LZPO01017331.1-41598 tataattatacaGGTGAGCA  Intron 3   CAGGCaggcgtcgc   
                     gttggctattca <1-----[41561:39910]-1>  gaccccaga   
                     aacccaggccta                          aattccggc   


//
Making a G in phase 1 intron
Making a G in phase 1 intron
>LZPO01017331.1:subseq(0,95551).pep
MSFCSFFGGEVFQNHFEPGVYVCAKCGYELFSSHSKYAHSSPWPAFTETIHADSVTKRPE
KNRPEALKVSCGKCGNGLGHEFLNDGPKRGQSRFXIFSSSLKFIPKGREAPASQGH
//
>LZPO01017331.1:subseq(0,95551).[45551:39879].sp
ATGTCGTTCTGCAGCTTCTTCGGAGGCGAGGTTTTCCAGAATCACTTCGAGCCAGGTGTC
TATGTGTGTGCCAAGTGTGGCTACGAGTTGTTCTCCAGCCACTCAAAGTATGCACACTCT
TCCCCGTGGCCAGCATTCACTGAAACCATCCATGCAGACAGTGTCACCAAGCGCCCTGAG
AAAAACCGACCTGAAGCTTTAAAGGTGTCCTGTGGCAAGTGTGGCAATGGGTTGGGCCAC
GAGTTCCTGAATGATGGCCCCAAGCGGGGACAATCCCGATTCTGAATATTCAGCAGCTCA
TTGAAGTTCATCCCTAAAGGCAGAGAAGCTCCTGCCTCCCAGGGGCAC
//
LZPO01017331.1:subseq(0,95551)	GeneWise	match	45551	39881	217.19	-	.	LZPO01017331.1:subseq(0,95551)-genewise-prediction-1
LZPO01017331.1:subseq(0,95551)	GeneWise	cds	45551	45497	0.00	-	0	LZPO01017331.1:subseq(0,95551)-genewise-prediction-1
LZPO01017331.1:subseq(0,95551)	GeneWise	intron	45496	42258	0.00	-	.	LZPO01017331.1:subseq(0,95551)-genewise-prediction-1
LZPO01017331.1:subseq(0,95551)	GeneWise	cds	42257	42109	0.00	-	2	LZPO01017331.1:subseq(0,95551)-genewise-prediction-1
LZPO01017331.1:subseq(0,95551)	GeneWise	intron	42108	41677	0.00	-	.	LZPO01017331.1:subseq(0,95551)-genewise-prediction-1
LZPO01017331.1:subseq(0,95551)	GeneWise	cds	41676	41562	0.00	-	0	LZPO01017331.1:subseq(0,95551)-genewise-prediction-1
LZPO01017331.1:subseq(0,95551)	GeneWise	intron	41561	39910	0.00	-	.	LZPO01017331.1:subseq(0,95551)-genewise-prediction-1
LZPO01017331.1:subseq(0,95551)	GeneWise	cds	39909	39881	0.00	-	2	LZPO01017331.1:subseq(0,95551)-genewise-prediction-1
//
