
genewise output
Score 181.62 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000106_2.0   50 GYRRVFEEYMRVISQRYPDIRIEGENYLPQPIY                 
                     GYRRVFEEYMRVISQRYPDIRIEGENYLPQPIY                 
                     GYRRVFEEYMRVISQRYPDIRIEGENYLPQPIY                 
LZPO01064442.1  -652 gtacgtggtacgaacctcgacagggatccccat                 
                     gaggttaaatgttgagacatgtagaaatcacta                 
                     gcgggtggcggttcggtaccctaagtcctaatt                 


SPP00000106_2.0   83                           HIASFLSVFKLVLIGLIIVGKDP 
                                               HIASFLS+FKLVLIGLIIVGKDP 
                                R:R[aga]       HIASFLSIFKLVLIGLIIVGKDP 
LZPO01064442.1  -553 AGGTGAGTG  Intron 1   TAGAcagttctatacgtagtaaggagc 
                       <2-----[551  :  130]-2> atccttcttattttgttttgaac 
                                               taatcgaccaaaaacaattcgtt 


SPP00000106_2.0  107 FAFFGMQAPSIWQWGQENK                               
                     FAFFGMQAPSIWQWGQENK                               
                     FAFFGMQAPSIWQWGQENK                               
LZPO01064442.1   -59 tgttgacgcaatctgcgaa                               
                     tcttgtaccgtgaggaaaa                               
                     tttccgattccgggcaatg                               


//
Making a R in phase 2 intron
>LZPO01064442.1.pep
GYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSIFKLVLIGLIIVGKDPFAF
FGMQAPSIWQWGQENK
//
>LZPO01064442.1.[652:1].sp
GGGTACAGGCGGGTGTTTGAGGAGTACATGCGGGTTATTAGCCAGCGGTATCCAGACATC
CGCATTGAAGGAGAGAATTACCTCCCTCAACCAATTTATAGACATATAGCATCTTTCCTG
TCAATCTTCAAACTAGTATTAATAGGCTTAATAATTGTTGGCAAGGATCCTTTTGCTTTT
TTCGGCATGCAAGCTCCTAGCATCTGGCAGTGGGGCCAAGAAAATAAG
//
LZPO01064442.1	GeneWise	match	652	3	181.62	-	.	LZPO01064442.1-genewise-prediction-1
LZPO01064442.1	GeneWise	cds	652	552	0.00	-	0	LZPO01064442.1-genewise-prediction-1
LZPO01064442.1	GeneWise	intron	551	130	0.00	-	.	LZPO01064442.1-genewise-prediction-1
LZPO01064442.1	GeneWise	cds	129	3	0.00	-	1	LZPO01064442.1-genewise-prediction-1
//
