genewise output Score 1020.54 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000081_2.0 185 RQADGRKVLRSSIREFLCSEAMFHLGVPTTRAGACVTSESTVVRDVFYD RQADGRKVLRSSIREFLCSEAMFHLGVPTTRAGACVTSESTV+RDVFYD RQADGRKVLRSSIREFLCSEAMFHLGVPTTRAGACVTSESTVIRDVFYD KN980585.1:sub-60876 acgggcagcctaacgtctaggatccggcaacgggtgatgtagacggttg gacaggattgcgtgattggacttatgtcccgcgcgtccaccttgattaa agcttcgcggaccggcgccacgccggcccagctctcgcgcggaccgctt SPP00000081_2.0 234 GNPKYEQCTVVLRVASTFI FGSF GNPKYE CTVVLR+ASTFI FGSF GNPKYEPCTVVLRIASTFI R:R[agg] FGSF KN980585.1:sub-60729 gacatgctaggtcagtataAGGTAATGC Intron 1 CAGGtgtt gacaaacgctttgtccctt <2-----[60670:58660]-2> tgct ttcataacgtggtatctca tact SPP00000081_2.0 258 EIFKSADEHTGRAGPSVGRNDIRVQLLDYVISSFYPEIQAAHASDSVQR EIFKSADEHTGRAGPSVGRNDIRVQLLDYVISSFYPEIQAAHASD VQR EIFKSADEHTGRAGPSVGRNDIRVQLLDYVISSFYPEIQAAHASDRVQR KN980585.1:sub-58646 gatatgggcagcggcaggaagacgcccgtgaatttcgacggcgagcgca attaccaaacggcgcgtggaatgtattaattgctacataccacgagtag gttgtatgcagtacccgggcctcgggtctcccctctgcgttcctccgga SPP00000081_2.0 307 NAAFFRE VTRRTARMVAEWQCVGFCH NAAFFRE VTRRTA MVAEWQCVGFCH NAAFFRE VTRRTAWMVAEWQCVGFCH KN980585.1:sub-58499 aggttcgGTCAGTG Intron 2 CAGgaccagtagggtctggttc accttga<0-----[58478:57045]-0>tcggccgttcagagtgtga ctcccgg gagcgggggtgggcgcccc SPP00000081_2.0 333 GVLNTDNMSILGLTIDYGPFGFLD GVLNTDNMSILGLTIDYGPFGFLD GVLNTDNMSILGLTIDYGPFGFLD R:R[agg] KN980585.1:sub-56987 ggcaagaaaacgcaagtgctgtcgAGGTAAGTG Intron 3 gttacaatgttgtctaagctgtta <2-----[56913:56627] cgcctccgccggcccctgccccgc SPP00000081_2.0 357 YDPDHVCNASDNTGRYAYSKQPEVCRWNLRKLAEALQPELPLELG YDPDHVCNASDNTGRYAYSKQPEVC+WNL+KLAEALQPELPLELG YDPDHVCNASDNTGRYAYSKQPEVCKWNLQKLAEALQPELPLELG KN980585.1:sub-56629 CAGGtgcgcgtagtgaagctgtaaccggtataccacgggcccgcccgcg -2> aacaatgaccaacggacagaacatgagataatcactacatctatg tctccgctccccccccaccggcggcggcggggtgcggaggcgggc SPP00000081_2.0 403 EAILAEEFDAEFQRHYLQKMRRKLGLVQVELEEDGALVSKLLETMHLT EAILAEEFD EFQRHY+QKMRRKLGLVQVELEED ALVSKLLETMHLT EAILAEEFDVEFQRHYMQKMRRKLGLVQVELEEDRALVSKLLETMHLT KN980585.1:sub-56490 ggacgggtgggtcactacaacaacgcgcggcgggagcgtaccgaacca acttcaatatatagaataatggatgttatataaagcttcattactatc gccgcggttcgcagccggggcgggctggggggacggggcgcggcgcgt SPP00000081_2.0 451 ADFTNTFYLLSSFPVELESPGLA ADFTNTF+LLSSFPVELESPGLA G:G[ggt] ADFTNTFFLLSSFPVELESPGLA KN980585.1:sub-56346 GGTGAGTG Intron 4 CAGGTggtaaatttcattcggcgtcgcg <1-----[56345:51538]-1> catcacttttgctctataccgtc tccaccccggcccagggggacgg SPP00000081_2.0 475 EFLARLMEQCASLEELRLAFRPQMDP EFLARLMEQCASLEELRLAFRPQMDP EFLARLMEQCASLEELRLAFRPQMDP R:R[cgg] KN980585.1:sub-51466 gtcgacagctgtcggcacgtcccagcCGGTGGGTA Intron 5 attcgttaagcctaatgtctgcatac <2-----[51386:50671] gcgcgggggtccggggggccgcggtc SPP00000081_2.0 501 QLSMMLMLAQSNPQLFALMGTRAGIARELERVEQQSRLEQLSAAE QLSMMLMLAQSNPQLFALMGTR GIARELERVEQQSRLEQLS AE QLSMMLMLAQSNPQLFALMGTRVGIARELERVEQQSRLEQLSMAE KN980585.1:sub-50673 CAGGcctaacacgctaccctgcagacggagagcgcggcctccgccaagg -2> atctttttcacacattcttgcgtgtcgatagtaaacgtaatgtca gacgggggagacgggcacgccggcccggggtggggtgggggcgag SPP00000081_2.0 547 LQSRNQGHWADWLQAY ARLDKDL LQSRNQGHWADWLQAY ARLDKDL LQSRNQGHWADWLQAY R:R[aga] ARLDKDL KN980585.1:sub-50534 ccaaacgctggtccgtAGGTGAGCC Intron 6 CAGAgccgagc taggaagagcagtaca <2-----[50484:50396]-2> cgtaaat ggcgcgccgccggggc cggcgcg SPP00000081_2.0 571 EGAGDAAAWQAEHVRVMHANNPKYVLRNYIAQNAIEAAERGDFSE EGAGDAAAWQAE VRVMHANNPKYVLRNYIAQNAIEAAERGDFSE EGAGDAAAWQAERVRVMHANNPKYVLRNYIAQNAIEAAERGDFSE KN980585.1:sub-50373 ggggggggtcggcgcgacgaacatgcaatagcagaggggcggttg agcgacccgacagtgttacaacaattgaatcaactaccaggatca accgttttggtgtgcggcccccgcgggcccggcccgtcgtgccag SPP00000081_2.0 616 VRRVLKLLETPYHCEAGAATDAEATE VRRVLKLLE PYHCEAGAATD EATE VRRVLKLLENPYHCEAGAATDPEATE KN980585.1:sub-50238 GCAAGCA Intron 7 CAGgccgcaccgactctgggggagcggag <0-----[50238:50162]-0>tggttattaacaagacgcccacacca ggggggaggctcctgggtcatcgcgg SPP00000081_2.0 642 ADGADGRQRSYSSKPPLWAAELCVT ADGADGRQRSYSSKPPLWAAELCVT ADGADGRQRSYSSKPPLWAAELCVT KN980585.1:sub-50083 ggggggaccttaaaccctgggctga cagcaggagcaggacctgccatgtc ctggtcggcccctgcgcgatagcga // Making a R in phase 2 intron Making a R in phase 2 intron Making a G in phase 1 intron Making a R in phase 2 intron Making a R in phase 2 intron >KN980585.1:subseq(605642,110876).pep RQADGRKVLRSSIREFLCSEAMFHLGVPTTRAGACVTSESTVIRDVFYDGNPKYEPCTVV LRIASTFIRFGSFEIFKSADEHTGRAGPSVGRNDIRVQLLDYVISSFYPEIQAAHASDRV QRNAAFFREVTRRTAWMVAEWQCVGFCHGVLNTDNMSILGLTIDYGPFGFLDRYDPDHVC NASDNTGRYAYSKQPEVCKWNLQKLAEALQPELPLELGEAILAEEFDVEFQRHYMQKMRR KLGLVQVELEEDRALVSKLLETMHLTGADFTNTFFLLSSFPVELESPGLAEFLARLMEQC ASLEELRLAFRPQMDPRQLSMMLMLAQSNPQLFALMGTRVGIARELERVEQQSRLEQLSM AELQSRNQGHWADWLQAYRARLDKDLEGAGDAAAWQAERVRVMHANNPKYVLRNYIAQNA IEAAERGDFSEVRRVLKLLENPYHCEAGAATDPEATEADGADGRQRSYSSKPPLWAAELC VT // >KN980585.1:subseq(605642,110876).[60876:50007].sp AGACAGGCCGATGGTCGCAAGGTCCTGCGGTCAAGCATCCGGGAGTTCCTGTGCAGCGAA GCCATGTTCCACCTGGGGGTCCCCACCACACGGGCCGGTGCCTGTGTCACGTCCGAGTCC ACGGTGATACGCGACGTGTTCTATGATGGTAATCCCAAATATGAACCATGCACGGTTGTG TTGCGTATAGCTTCCACTTTCATAAGGTTTGGATCCTTTGAGATTTTTAAGTCTGCAGAT GAGCACACAGGGCGTGCAGGCCCCAGCGTGGGGAGGAACGACATTCGCGTGCAGCTGCTT GACTATGTCATCAGCTCCTTTTACCCTGAGATCCAGGCTGCTCACGCCAGTGACCGCGTG CAGAGAAACGCTGCCTTCTTCCGGGAGGTGACACGGCGCACGGCGTGGATGGTGGCTGAG TGGCAGTGCGTGGGCTTCTGCCACGGCGTGCTCAACACTGACAACATGAGCATCCTGGGG CTCACCATCGACTATGGGCCCTTCGGCTTCCTGGACAGGTATGACCCTGACCACGTGTGC AATGCCTCCGACAACACCGGCCGCTACGCATACAGCAAGCAGCCCGAGGTGTGCAAGTGG AACCTGCAGAAGCTGGCTGAGGCCCTGCAGCCAGAGCTGCCCCTGGAGCTGGGCGAGGCC ATCCTGGCCGAGGAGTTTGATGTCGAGTTCCAAAGGCACTACATGCAGAAGATGCGCAGG AAGCTGGGCCTTGTGCAGGTGGAGCTGGAGGAAGACAGGGCGCTGGTGTCCAAGCTCCTG GAGACCATGCACCTGACTGGTGCTGACTTCACAAACACCTTCTTCTTGCTGAGCTCCTTC CCAGTGGAGCTGGAGTCGCCAGGCCTGGCGGAGTTCCTGGCCAGGCTGATGGAGCAGTGT GCCTCCCTGGAGGAGCTGAGGCTGGCCTTCCGGCCCCAGATGGATCCCCGGCAGCTATCC ATGATGCTGATGCTGGCACAGTCAAACCCGCAGCTGTTCGCACTCATGGGCACCCGGGTG GGCATCGCCAGGGAGCTGGAGCGTGTGGAGCAGCAGTCTCGGCTGGAGCAGCTGAGCATG GCAGAGCTGCAGAGCAGGAACCAGGGCCACTGGGCCGACTGGCTGCAGGCGTACAGAGCC CGGCTGGACAAGGACCTGGAAGGCGCCGGGGATGCTGCTGCTTGGCAGGCTGAGCGTGTG CGCGTGATGCACGCCAACAACCCCAAGTACGTGCTGAGGAACTACATCGCGCAGAACGCC ATCGAGGCTGCCGAGCGTGGGGACTTCTCAGAGGTGCGGCGGGTGCTGAAGCTACTGGAG AACCCTTACCACTGTGAGGCGGGGGCTGCCACAGATCCCGAGGCCACGGAGGCCGATGGG GCGGATGGCAGGCAGCGCTCCTACAGCAGTAAGCCCCCGCTCTGGGCAGCTGAACTGTGC GTGACA // KN980585.1:subseq(605642,110876) GeneWise match 60876 50009 1020.54 - . KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise cds 60876 60671 0.00 - 0 KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise intron 60670 58660 0.00 - . KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise cds 58659 58479 0.00 - 1 KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise intron 58478 57045 0.00 - . KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise cds 57044 56914 0.00 - 0 KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise intron 56913 56627 0.00 - . KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise cds 56626 56346 0.00 - 1 KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise intron 56345 51538 0.00 - . KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise cds 51537 51387 0.00 - 2 KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise intron 51386 50671 0.00 - . KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise cds 50670 50485 0.00 - 1 KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise intron 50484 50396 0.00 - . KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise cds 50395 50239 0.00 - 1 KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise intron 50238 50162 0.00 - . KN980585.1:subseq(605642,110876)-genewise-prediction-1 KN980585.1:subseq(605642,110876) GeneWise cds 50161 50009 0.00 - 0 KN980585.1:subseq(605642,110876)-genewise-prediction-1 //