genewise output
Score 359.94 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000026_2.0    1 MSLGRLCRLLKPALLCGALAAPGLAGTM                      
                     M+LGRLCRLLKPALLCGA+AAPGLAGTM                      
                     MNLGRLCRLLKPALLCGAVAAPGLAGTM                      
KN985201.1:subs48720 aacgcctcccacgcctgggggcgcggaaGTGAGCG  Intron 1     
                     tatggtggttaccttggctcccgtcgct<0-----[48804:50002]  
                     gcccctccggggggctgtgtgcccctcg                      


SPP00000026_2.0   29    CASRDDWRCARSMHEFSAKDIDGHMVNLDKY                
                        CASRDDWRCARSMHEFSAKDIDGH+VNLDKY                
                        CASRDDWRCARSMHEFSAKDIDGHIVNLDKY                
KN985201.1:subs50000 CAGtgtcggtctgctacgttgagaggcagacgat                
                     -0>gccgaagggcgctaatccaatagattataaa                
                        cgcgccgctgccgcgtctgcccgcatcgcgc                


SPP00000026_2.0   60                           GFVCIVTNVASQUGKTEVNYTQL 
                                               GFVCIVTNVASQ GKTEVNYTQL 
                                R:R[cgg]       GFVCIVTNVASQXGKTEVNYTQL 
KN985201.1:subs50096 CGGTGGGCG  Intron 2   CAGGgtgtagaaggtctgaaggatacc 
                       <2-----[50098:50182]-2> gttgttcatccaggacataacat 
                                               gcgcccccgccgacgcagcctgc 


SPP00000026_2.0   84 VDLHARYAECGLRILAFPCNQFGKQ                       E 
                     VDLHARYAECGLRILAFPCNQFGKQ                       E 
                     VDLHARYAECGLRILAFPCNQFGKQ                       E 
KN985201.1:subs50253 ggtcgctggtgtcacgtctactgacGTGGGCG  Intron 3   CAGg 
                     tatacgacaggtgttctcgaatgaa<0-----[50328:50514]-0>a 
                     ccgccaccgttggcgccatcgcggg                       g 


SPP00000026_2.0  110 PGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILG 
                     PGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKG LG 
                     PGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGTLG 
KN985201.1:subs50518 cgaaggaagtgggtagatgataaatgaggggccctataaaccagagacg 
                     cggaaataatccgaatatattgatgtagaacactgagtatacagagctg 
                     agtcagcagccgccccaccgccgccgcgccccgggggggcgcgcgccga 


SPP00000026_2.0  159                           AIKWNFTK                
                                               AIKWNFTK                
                                N:N[aat]       AIKWNFTK                
KN985201.1:subs50665 AAGTGCGTG  Intron 4   CAGTgaatataa                
                       <2-----[50667:52096]-2> ctagatca                
                                               ccggcccg                


SPP00000026_2.0  168                        FLIDKNGCVVKRYGPMEEPL       
                                            FLIDKNGCVVKRYGPMEEPL       
                                            FLIDKNGCVVKRYGPMEEPL       
KN985201.1:subs52122 GTAAGGG  Intron 5   CAGtcagaagtggactgcaggcc       
                     <0-----[52122:52266]-0>tttaaaggttagagctaact       
                                            cctcgcccggggcacggacg       


SPP00000026_2.0  188                        VIEKDLPHYF                 
                                            VIEKDLP YF                 
                                            VIEKDLPQYF                 
KN985201.1:subs52327 GTAGGTC  Intron 6   CAGgagagccctt                 
                     <0-----[52327:52404]-0>ttaaatcaat                 
                                            gaggcgcgtc                 


//
Making a R in phase 2 intron
Making a N in phase 2 intron
>KN985201.1:subseq(893875,102434).pep
MNLGRLCRLLKPALLCGAVAAPGLAGTMCASRDDWRCARSMHEFSAKDIDGHIVNLDKYR
GFVCIVTNVASQXGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA
AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGTLGNAIKWNFTKFLIDKNGCVVKRY
GPMEEPLVIEKDLPQYF
//
>KN985201.1:subseq(893875,102434).[48720:52434].sp
ATGAACCTCGGCCGCCTTTGCCGCCTGCTGAAGCCGGCGCTGCTCTGTGGGGCTGTGGCT
GCGCCCGGCCTCGCCGGTACCATGTGCGCGTCCCGGGACGACTGGCGCTGTGCGCGCTCC
ATGCACGAGTTTTCCGCTAAGGACATCGACGGGCACATAGTTAACCTGGACAAGTACCGG
GGGTTCGTGTGCATCGTCACCAACGTGGCCTCCCAGTGAGGCAAGACCGAAGTGAACTAC
ACTCAGCTCGTCGACTTGCACGCCCGATACGCCGAGTGTGGTTTGCGGATCCTGGCCTTC
CCATGTAACCAGTTCGGGAAGCAGGAGCCAGGGAGTAACGAAGAGATCAAAGAGTTCGCC
GCGGGCTACAACGTCAAATTCGACATGTTCAGCAAGATCTGCGTGAACGGGGACGACGCC
CACCCGCTGTGGAAGTGGATGAAGATCCAGCCCAAGGGCAAGGGCACCCTGGGAAATGCC
ATCAAGTGGAACTTCACCAAGTTCCTCATTGACAAGAACGGCTGCGTGGTGAAGCGGTAC
GGACCCATGGAGGAACCCCTGGTGATAGAGAAGGACCTGCCCCAGTATTTC
//
KN985201.1:subseq(893875,102434)	GeneWise	match	48720	52434	359.94	+	.	KN985201.1:subseq(893875,102434)-genewise-prediction-1
KN985201.1:subseq(893875,102434)	GeneWise	cds	48720	48803	0.00	+	0	KN985201.1:subseq(893875,102434)-genewise-prediction-1
KN985201.1:subseq(893875,102434)	GeneWise	intron	48804	50002	0.00	+	.	KN985201.1:subseq(893875,102434)-genewise-prediction-1
KN985201.1:subseq(893875,102434)	GeneWise	cds	50003	50097	0.00	+	0	KN985201.1:subseq(893875,102434)-genewise-prediction-1
KN985201.1:subseq(893875,102434)	GeneWise	intron	50098	50182	0.00	+	.	KN985201.1:subseq(893875,102434)-genewise-prediction-1
KN985201.1:subseq(893875,102434)	GeneWise	cds	50183	50327	0.00	+	1	KN985201.1:subseq(893875,102434)-genewise-prediction-1
KN985201.1:subseq(893875,102434)	GeneWise	intron	50328	50514	0.00	+	.	KN985201.1:subseq(893875,102434)-genewise-prediction-1
KN985201.1:subseq(893875,102434)	GeneWise	cds	50515	50666	0.00	+	0	KN985201.1:subseq(893875,102434)-genewise-prediction-1
KN985201.1:subseq(893875,102434)	GeneWise	intron	50667	52096	0.00	+	.	KN985201.1:subseq(893875,102434)-genewise-prediction-1
KN985201.1:subseq(893875,102434)	GeneWise	cds	52097	52121	0.00	+	1	KN985201.1:subseq(893875,102434)-genewise-prediction-1
KN985201.1:subseq(893875,102434)	GeneWise	intron	52122	52266	0.00	+	.	KN985201.1:subseq(893875,102434)-genewise-prediction-1
KN985201.1:subseq(893875,102434)	GeneWise	cds	52267	52326	0.00	+	0	KN985201.1:subseq(893875,102434)-genewise-prediction-1
KN985201.1:subseq(893875,102434)	GeneWise	intron	52327	52404	0.00	+	.	KN985201.1:subseq(893875,102434)-genewise-prediction-1
KN985201.1:subseq(893875,102434)	GeneWise	cds	52405	52434	0.00	+	0	KN985201.1:subseq(893875,102434)-genewise-prediction-1
//