------- SECIS element -- id:1 -- grade:B ---- Chromosome = your_sequence Strand = - Positions = 6594 - 6520 Found by: Infernal (score=11.85) Covels (score=6.21) Stem2 length = 10 Apical loop length = 12 Insertion in stem2 = 0, 0 Free Energy = -12.06 ..(((((((........(((((((((((((((...............))))))))))))))).........))))))).. model uucggucaugcg-UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc .(((((({(........{[[((({((((((((.....---.......))))))))})))]]}.....-.-.)})))))). target GGUUGGAUGUGGUUGGAUGAUGGUCUUUUCUAAAGUG---AAAGGGGUAGGGAAGUCCAGACUGUAU-G-CCCUCCAGUG **** ^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = your_sequence Strand = + Positions = 6846 - 6927 Found by: Infernal (score=10.55) Covels (score=4.8) Stem2 length = 9 Apical loop length = 17 Insertion in stem2 = 0, 0 Free Energy = -6.96 ..(((((((................(((((((((((((((...................)))))))))))))))........))))))).. model uucggucaugcg---------UuaAUGAcGgccuggcccuAAAcC----cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .((({({((((..............([[((((((((((.------................))))))))))]])..--.)-)))})}))). target CUUUAACAAAUGCUGGCUGCCAACAUGAUGUACUGUUUC------AUGCUUCUUUCUGGCAAAAUAGUGCAGAAGA--AA-UUUCUCAGAU **** ****