------- SECIS element -- id:1 -- grade:A ---- Chromosome = your_sequence Strand = - Positions = 4957 - 4885 Found by: Infernal (score=32.2) Covels (score=24.91) Stem2 length = 11 Apical loop length = 14 Insertion in stem2 = 0, 1 Free Energy = -20.54 ..(((((((.......(((((((((((((((...............))))))))).))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccagg-cCuGAUGuuuuuucaugaccggc (((((((((---....{[[((((((((((((.....-.........))))))))).)))]]}..--....))))))))) target UCUGGUGUU---UCUGUGAAGUUCGGUUUUUAAAAG-GCAAAGCCAGAAAACCGACACUGAUGU--UUCUGACACCGGG **** ^^^ ****