Predicted by: exonerate Blastx evalue: 8e-67 Query protein: gi|208022673|ref|NP_001129077.1| selenoprotein P precursor [Equus caballus] Positions on query: 1-385 Query length: 385 Target name: KE762614.1:subseq_1348,30137_ Positions on target: 12449-12651,13531-13743,15014-15131,17646-17768,17802-18302 Strand: + Has a Redox Box! Query MWRSLGLALALCLLPWGGTESQGQSSFCKQPPAWSIRDQDPMLNSYGSVTVVALLQASUYLCLLQASR < |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |/||/| < Target MWRSLGLALALCLLPWGGTESQEQSSFCKQPPAWSIGDQDPMLNSYGSVTVVALLQASUYFCILQSSS ataacgtgcgctccctggagacgcatttacccgtaaggcgcacattgtgagggcccgattttacctta tgggtgtctctgttcgggcagaaagctgaacccggtgaaacttacagctcttcttacggatgttaccg ggacgcgcgtctcctgggaacggaccttggtacgcactacaggcattattatttcaccactctaaat * Query ---Intron---> LEDLRVKLEKEGYSNISYVVVNHQEISARLKYIHLKNKVSEYIAVYQQEENQTDIW 879bp > |||||||||/||/||||||/|||| ||/||||/||||||||/|/||||||||||/| Target LEDLRVKLEEEGFSNISYVIVNHQGISSRLKYMHLKNKVSEHISVYQQEENQTDVW tggccgacggggttaattgagaccgattctataccaaagtgcatgtccggacaggt taatgtataaagtcatcatttaaagtccgtaatataaatcaatctaaaaaaacatg tgacgaaagggattttttttttttaacttaaatgttatgtagtttttaaaacaatcg Query TLLNGSKDDFLIYDR <---Intron---> CGRLVYHLGLPYSFLTFPYVEEAIKIAYCEKKCGNCSLM |||||/||||||||| < 1270bp > |||||||/|||/| |/| |||||||||||| ||||||| Target TLLNGNKDDFLIYDR CGRLVYHIGLPFSSLSFLYVEEAIKIAYCEDKCGNCSLT actagaaggtcatga tgccgtcagtcttacatttggggaaagttggatgattca cttagaaaatttaag gggttaatgtctcgtgttataactatcagaaaggagctc tcatacatcccatc atcttatcttgtctcatcataaactgttctacatacctcg Query <---Intron---> TLEDEDFCKTLSLATVEKTTEDSQP-HHHHHHQHHHKHGHQ <---Intron-- < 2514bp > ||||| || /|| |||/||| || ||||||/|||/| | < 33bp Target TLEDEGACKNVSLVTVEQTTEAPQPHHHHHHHRHHHRHHHH acgggggtaagtcgaggcaaggccccccccccccccccccc ctaaagcgaatcttctaaccaccacaaaaaaagaaagaaaa cgatacctatatgttgaaatgtaaatttctctctctctctc Query -> HVGNSQLSENQQPEATGAPEHPPPPGLHHHHKHKGQQRRGHPENUDMPGGESLQLSLPQKKLUQKGC > |/ |||||/|||| | ||||| |||/|/| | | || | || |//|||| |||/ | | Target HIRKGQLSENKQPEAPNASEHPPPLGLHNHYKLKDPQIHGHSNNCYMPESENVQLSLSQKKVCGKRC caaagcctgaaccggcagtgcccccgccactacagccacgctaattacgagagcctctcaagtgaat atgagatcaaaacaccaccaaccctgtaaaaataacatagacaagatcagaatatctcaaatggagg ctgacgtagtgaaaaatatgtctcacttcctgcgcaaatttaccctgaatatgaattaagactagat * * Query INQLLCKMPKDSKLAPSSUCUHCRHLIFENTRSAITUQCTENLPSLCSUQGLWAEENVIESCQURLPPAA || ||||/ ||||||||| |||||||||| | |||||| | ||||||||||||||||||| |||||||| Target INPLLCKLLKDSKLAPSSCCUHCRHLIFEKTGPAITUQCKEKLPSLCSUQGLWAEENVIESUQURLPPAA aactctatcagtatgcaatttctcccatgaagcgaatctagacctttatcgctgggagagttctctccgg tacttgattaacatccgggggaggatttaacgcctcgagaaatcctgggagtgcaaattacgaggtcccc ataaccggcataggtttcccattatgataaagtaccagtaaacctatcaggtgaggcctatagatgtatc * * * * * * Query UQPSQQLKPTEASTNUSUKYKAAMUKUPSN || ||||/|||| |||||| || ||||||| Target UQASQQLEPTEARTNUSUKNKAKMUKUPSN tcgacccgcaggcaatataaagaatatcta gacgaataccacgcagggaaacatgagcca agatggcgcaaccctacaatgaagaaagac * * * * * Predicted by: exonerate Blastx evalue: 8e-67 Query protein: gi|208022673|ref|NP_001129077.1| selenoprotein P precursor [Equus caballus] Positions on query: 1-385 Query length: 385 Target name: KE762614.1:subseq_1348,30137_ Positions on target: 12449-12651,13531-13743,15014-15131,17646-17768,17802-18302 Strand: + Has a Redox Box! Query MWRSLGLALALCLLPWGGTESQGQSSFCKQPPAWSIRDQDPMLNSYGSVTVVALLQASUYLCLLQASR < |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |/||/| < Target MWRSLGLALALCLLPWGGTESQEQSSFCKQPPAWSIGDQDPMLNSYGSVTVVALLQASUYFCILQSSS ataacgtgcgctccctggagacgcatttacccgtaaggcgcacattgtgagggcccgattttacctta tgggtgtctctgttcgggcagaaagctgaacccggtgaaacttacagctcttcttacggatgttaccg ggacgcgcgtctcctgggaacggaccttggtacgcactacaggcattattatttcaccactctaaat * Query ---Intron---> LEDLRVKLEKEGYSNISYVVVNHQEISARLKYIHLKNKVSEYIAVYQQEENQTDIW 879bp > |||||||||/||/||||||/|||| ||/||||/||||||||/|/||||||||||/| Target LEDLRVKLEEEGFSNISYVIVNHQGISSRLKYMHLKNKVSEHISVYQQEENQTDVW tggccgacggggttaattgagaccgattctataccaaagtgcatgtccggacaggt taatgtataaagtcatcatttaaagtccgtaatataaatcaatctaaaaaaacatg tgacgaaagggattttttttttttaacttaaatgttatgtagtttttaaaacaatcg Query TLLNGSKDDFLIYDR <---Intron---> CGRLVYHLGLPYSFLTFPYVEEAIKIAYCEKKCGNCSLM |||||/||||||||| < 1270bp > |||||||/|||/| |/| |||||||||||| ||||||| Target TLLNGNKDDFLIYDR CGRLVYHIGLPFSSLSFLYVEEAIKIAYCEDKCGNCSLT actagaaggtcatga tgccgtcagtcttacatttggggaaagttggatgattca cttagaaaatttaag gggttaatgtctcgtgttataactatcagaaaggagctc tcatacatcccatc atcttatcttgtctcatcataaactgttctacatacctcg Query <---Intron---> TLEDEDFCKTLSLATVEKTTEDSQP-HHHHHHQHHHKHGHQ <---Intron-- < 2514bp > ||||| || /|| |||/||| || ||||||/|||/| | < 33bp Target TLEDEGACKNVSLVTVEQTTEAPQPHHHHHHHRHHHRHHHH acgggggtaagtcgaggcaaggccccccccccccccccccc ctaaagcgaatcttctaaccaccacaaaaaaagaaagaaaa cgatacctatatgttgaaatgtaaatttctctctctctctc Query -> HVGNSQLSENQQPEATGAPEHPPPPGLHHHHKHKGQQRRGHPENUDMPGGESLQLSLPQKKLUQKGC > |/ |||||/|||| | ||||| |||/|/| | | || | || |//|||| |||/ | | Target HIRKGQLSENKQPEAPNASEHPPPLGLHNHYKLKDPQIHGHSNNCYMPESENVQLSLSQKKVCGKRC caaagcctgaaccggcagtgcccccgccactacagccacgctaattacgagagcctctcaagtgaat atgagatcaaaacaccaccaaccctgtaaaaataacatagacaagatcagaatatctcaaatggagg ctgacgtagtgaaaaatatgtctcacttcctgcgcaaatttaccctgaatatgaattaagactagat * * Query INQLLCKMPKDSKLAPSSUCUHCRHLIFENTRSAITUQCTENLPSLCSUQGLWAEENVIESCQURLPPAA || ||||/ ||||||||| |||||||||| | |||||| | ||||||||||||||||||| |||||||| Target INPLLCKLLKDSKLAPSSCCUHCRHLIFEKTGPAITUQCKEKLPSLCSUQGLWAEENVIESUQURLPPAA aactctatcagtatgcaatttctcccatgaagcgaatctagacctttatcgctgggagagttctctccgg tacttgattaacatccgggggaggatttaacgcctcgagaaatcctgggagtgcaaattacgaggtcccc ataaccggcataggtttcccattatgataaagtaccagtaaacctatcaggtgaggcctatagatgtatc * * * * * * Query UQPSQQLKPTEASTNUSUKYKAAMUKUPSN || ||||/|||| |||||| || ||||||| Target UQASQQLEPTEARTNUSUKNKAKMUKUPSN tcgacccgcaggcaatataaagaatatcta gacgaataccacgcagggaaacatgagcca agatggcgcaaccctacaatgaagaaagac * * * * *