Selenoprotein id: 1         Category: known selenoprotein
help
Protein prediction
Predicted by: exonerate Blastx evalue: 1e-76
Query protein: gi|169636443|ref|NP_001108608.1| glutathione peroxidase 2 [Sus scrofa] >gi|197717771|gb|ABI63991.2| glutathione peroxidase 2 [Sus scrofa]
Positions on query: 1-190 Query length: 190

Target name: KE814389.1
Positions on target: 885-1106,3423-3770 Strand: +


  Query   MAYIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRFPRRLVVLGFPCNQ
          |||||||||||/|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
  Target  MAYIAKSFYDLTAISLDGEKVDFNTFRGRAVLIENVASLUGTTTRDFTHLNELQCRFPRRLVVLGFPCNQ
          agtagatttgcagaacgggaggtaatcgaggcagaggtctgaaacgtaccagcctctcaccggcgtctac
          tcatcactaatcctgtagaatatactgggctttaatcctggcccgatcataataggtcggttttgtcgaa
          gtctcgcccccttccgtgggatccacacgaggtgtgcgcaaaccgccccccggacctcgcggttccccca
                                                 *                              
  
  Query   FGHQ <---Intron---> ENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFAYLKDKLP
          |||| <   2316bp   > |||||||||||||||||||||||||||||||/||||||||||||||||||
  Target  FGHQ                ENCQNEEILNSLKYVRPGGGFQPTFTLIQKCEVNGQNEHPVFAYLKDKLP
          tgcc                gatcaggacaacatgccgggtccatacacatggagcagccgtgtcagacc
          tgaa                aagaaaattagtaatgcgggtacctcttaagatagaaaacttcataaatc
          tatg                gccgtggcgctcgtcctgtacgcctctcagtggttgcgttccccggcgct
                                                                                
  
  Query   YPYDDPFSLMTDPKFIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRLLKVAI
          ||||||||||||||||||||||||||/|||||||||||||||||||||||||||||||||||||||
  Target  YPYDDPFSLMTDPKFIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRLLKVAI
          tctggcttcaagcataatacgcctgggtatgatcagcgggctcctacatcaaaagcgaacccagga
          acaaactcttcacatttggctggcatcgataatttgcagactggaggctcctatacatagttatct
          ctcccattcggtcacctgcggccatgcgctggcgtgggggccacccccctccctgtccgcccatca