Selenoprotein id: 1         Category: known selenoprotein
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Protein prediction
Predicted by: exonerate Blastx evalue: 3e-34
Query protein: gi|260081569|gb|ACX31205.1| deiodinase 1 [Ovis aries]
Positions on query: 1-146 Query length: 146

Target name: KE815153.1
Positions on target: 22228-22264,14626-14769,9182-9381,7255-7311 Strand: -


  Query   SGERCSIWDFMQG <---Intron---> NRPLVLNFGSCTUPSFIFKFDQFKRLIEEFGSVADFLIIYI
          ||//|/|||||/| <   7458bp   > ||||||||||||||||/ ||||||/|||/| |/||||/|||
  Target  SGQKCNIWDFMKG                NRPLVLNFGSCTUPSFLLKFDQFKKLIEDFSSIADFLVIYI
          tgcataatgtaag                aactgcatgatatcttctatgctaacaggtataggtcgata
          cgaagatgatta                gagctttatgggcgcctttataataattaatgctcattttat
          aaggcctgccga                ccaagggttattcatattgatcacgattacttcaatttctct
                                                   *                            
  
  Query   EEAHASD <---Intron---> GWAFKNNVDIKNHRNLQDRLRAAHLLLDRSPQCPVVVDTMKNQSSSC
          ||||||| <   5244bp   > |||||||| |/||||||/||/||//||||||||||||||||||||  
  Target  EEAHASD                GWAFKNNVKIRNHRNLQERLQAAYMLLDRSPQCPVVVDTMKNQSSHL
          gggcgtg                gtgtaaagaaaaccaccgcccggtaccgaacctcggggaaaacaacc
          aacacc                aggctaaatatgaagataagtaccatttaggcagctttactaaaggat
          aaataa                tcgttgctgacgccgccgacggactggacaccgctgggcaggcgcccc
                                                                                
  
  Query   YAALPERLYVLQEGRILYK <---Intron---> GKPGPWNYHPEEVRAVLEK
          ||||||||||||||||||| <   1870bp   > |||||||||||||||||||
  Target  YAALPERLYVLQEGRILYK                GKPGPWNYHPEEVRAVLEK
          tggccgactgccggaacta                gacgctatccgggcggcga
          acctcagtattaaggttaa                gacgcgaaacaatgcttaa
          cgagtggctgcggcgcccg                tatctgcttagattttgag