Command line: [exonerate -m p2g --showtargetgff --exhaustive yes -q proteina.fa -t TR3_Dolphin.1.subseq.fa]
Hostname: [ws116052]

C4 Alignment:
------------
         Query: TR3_Dolphin
        Target: KI537815.1:subseq(385304,200299) Balaenoptera acutorostrata scammoni unplaced genomic scaffold scaffold287, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 2315
   Query range: 0 -> 512
  Target range: 30764 -> 117954

      1 : Gln  >>>> Target Intron 1 >>>>  ValLysGluLeuPheSerSerLeuGl :     10
          |||           59230 bp          ||||||||||||||||||||||||||
          Gln++                         ++ValLysGluLeuPheSerSerLeuGl
  30765 : CAGgt.........................agGTTAAagaactcttttcttctctggg :  90022

     11 : yValAspCysAsnIleLeuGluLeuAspGlnVal{A}  >>>> Target Intron  :     22
          ||||||||||||||||||||||||||||||||||{|}            982 bp   
          yValAspCysAsnIleLeuGluLeuAspGlnVal{A}++                   
  90023 : aGTTGACTGTAATATCTTGGAACTTGATCAAGTT{G}gt................... :  90061

     23 : 2 >>>>  {sp}AspGlyAlaSerValGlnGluValLeuSerGluIleThrAsnGlnA :     38
                  {||}||||||||||||||||||||||||||||||||||||||||||||||
                ++{sp}AspGlyAlaSerValGlnGluValLeuSerGluIleThrAsnGlnA
  90062 : ......ag{AT}GATGGGGCCAGTGTTCAAGAGGTGCTGTCGGAGATCACTAATCAGA :  91088

     39 : rgThrValProAsnIlePheValAsnLysValHisValGlyGlyCysAspArgThrPh :     57
          |||||||||||!:!||||||||||||||||||||||||||||||||||||||||||||
          rgThrValProSerIlePheValAsnLysValHisValGlyGlyCysAspArgThrPh
  91089 : GGACTGTGCCCAGTATCTTTGTGAATAAAGTGCACGTGGGCGGATGTGACCGAACTTT :  91145

     58 : eGln  >>>> Target Intron 3 >>>>  AlaHisGlnSerGlyLeuLeuGlnL :     67
          ||||           2195 bp           |||||||||||||||||||||||||
          eGln++                         ++AlaHisGlnSerGlyLeuLeuGlnL
  91146 : CCAGgt.........................agGCACATCAGAGTGGTTTATTACAGA :  93370

     68 : ysLeuLeuGlnGluAspProAlaTyrAspTyrAspLeuIleValIleGlyGlyGlySe :     86
          ||||||||:!!|||||||||||||||||||||||||||||||||||||||||||||||
          ysLeuLeuGluGluAspProAlaTyrAspTyrAspLeuIleValIleGlyGlyGlySe
  93371 : AGCTCCTTGAGGAAGATCCAGCATATGATTACGACCTCATTGTCATTGGTGGTGGCTC :  93427

     87 : rGlyGlyLeuSerCysAlaGln  >>>> Target Intron 4 >>>>  GluAlaA :     96
          ||||||||||||||||||||||            235 bp           |||||||
          rGlyGlyLeuSerCysAlaGln++                         ++GluAlaA
  93428 : TGGCGGCCTTTCGTGTGCTCAGgt.........................agGAAGCCG :  93692

     97 : laAlaLeuGlyArgArgValMetValLeuAspLeuValValProSerProGlnGlyTh :    115
          ||!.!|||||||||||||||||||||||||||:!!|||||||||||||||||| !!||
          laValLeuGlyArgArgValMetValLeuAspValValValProSerProGlnArgTh
  93693 : CCGTTTTGGGGAGGAGAGTCATGGTGCTGGACGTTGTGGTCCCGTCGCCCCAGCGCAC :  93749

    116 : rSerTrp{G}  >>>> Target Intron 5 >>>>  {ly}LeuGlyGlyThrCys :    123
          |||||||{|}           1894 bp           {||}|||||||||||||||
          rSerTrp{G}++                         ++{ly}LeuGlyGlyThrCys
  93750 : ATCGTGG{G}gt.........................ag{GT}CTTGGTGGCACTTGT :  95667

    124 : ValAsnValGlyCysIleProLysGlnLeuMetHisGlnAlaAlaLeuLeuGlyGlnA :    143
          ||||||||||||||||||||||||:!!|||||||||||||||||||||||||||||||
          ValAsnValGlyCysIleProLysLysLeuMetHisGlnAlaAlaLeuLeuGlyGlnA
  95668 : GTGAATGTTGGCTGCATCCCTAAGAAGTTGATGCACCAAGCCGCCCTTTTGGGCCAGG :  95727

    144 : laLeuThrAspSerArgArgPheGlyTrpGluCysAlaGlnGln{V}  >>>> Targ :    158
          |||||||||||||||||!:!||||||||||||! !  !||||||{|}           
          laLeuThrAspSerArgLysPheGlyTrpGluTyrAsnGlnGln{V}++         
  95728 : CACTAACTGACTCAAGGAAGTTTGGCTGGGAGTACAATCAACAA{G}gt......... :  95775

    159 : et Intron 6 >>>>  {al}LysHisAsnTrpGluThrMetThrGluAlaIleGln :    170
          2005 bp           {||}||||||||||||||||||||||||||||||||||||
                          ++{al}LysHisAsnTrpGluThrMetThrGluAlaIleGln
  95776 : ................ag{TG}AAGCACAACTGGGAGACCATGACCGAAGCCATTCAG :  97813

    171 : LysHisValGlySerLeuAsnTrpSerTyrArgArgAlaLeuArgGluLysAlaValA :    190
          !!.|||:!!||||||:!!!.! !!.!!|||||||||||||||||||||||||||||||
          AsnHisIleGlySerMetThrArgGlyTyrArgArgAlaLeuArgGluLysAlaValA
  97814 : AACCACATCGGCTCTATGACCCGGGGCTACCGGCGGGCTCTGAGGGAGAAGGCGGTGG :  97873

    191 : laTyrValAsnSerTyrGlyGluPheValGluHisHisLysIleLys  >>>> Targ :    206
          ||:!!|||||||||! !||||||||||||||||||||||||||||||           
          laHisValAsnSerCysGlyGluPheValGluHisHisLysIleLys++         
  97874 : CCCACGTCAACTCCTGCGGGGAATTTGTTGAACACCATAAAATCAAGgt......... :  97923

    207 : et Intron 7 >>>>  AlaThrAspGlyLysGlyGlnGluThrTyrTyrThrAlaA :    219
          1238 bp           ||||||:!!||||||||||||||||||!:!||||||||||
                          ++AlaThrAsnGlyLysGlyGlnGluThrPheTyrThrAlaA
  97924 : ................agGCAACCAATGGAAAGGGACAGGAAACGTTTTATACTGCAG :  99198

    220 : laLysPheValIleAlaThrGlyGluArgProArgTyrLeuGlyIleGlnGlyAspLy :    238
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          laLysPheValIleAlaThrGlyGluArgProArgTyrLeuGlyIleGlnGlyAspLy
  99199 : CAAAATTTGTCATAGCAACAGGGGAAAGGCCGCGCTATTTGGGAATCCAAGGAGATAA :  99255

    239 : sGluTyrCysIleThr{Se}  >>>> Target Intron 8 >>>>  {r}AspAsp :    246
          ||||||||||||||||{||}            757 bp           {|}||||||
          sGluTyrCysIleThr{Se}++                         ++{r}AspAsp
  99256 : AGAATACTGTATTACT{AG}gt.........................ag{C}GATgac : 100036

    247 : LeuPheSerLeuProTyrCysProGlyAlaThrLeuValValGlyAlaSerSerValA :    266
          ||||||||||||||||||||||||||||||||||||||||||||||||||| !!!.!|
          LeuPheSerLeuProTyrCysProGlyAlaThrLeuValValGlyAlaSerProAlaA
 100037 : ctcttctctctgccctacTGCCCGGGCGCGACCCTGGTGGTGGGCGCATCCCCCGCGG : 100096

    267 : laLeuGluCysAlaGlyPheLeuAlaGlyLeuGlyLeuGluValThrValMetValAr :    285
          ||||||||||||||||| !!||||||||||||||||||||||||||||||||||||||
          laLeuGluCysAlaGlyValLeuAlaGlyLeuGlyLeuGluValThrValMetValAr
 100097 : CGCTGGAGTGCGCAGGCGTCCTGGCCGGCCTGGGCCTGGAGGTCACGGTCATGGTGCG : 100153

    286 : gSerGlnLeuLeuArgGlyPheAspGlnGluMetAlaGluLysValAlaSerSerMet :    304
          ||||||||||||||||||||||||||||||||||||||||||||||!.!|||||||||
          gSerGlnLeuLeuArgGlyPheAspGlnGluMetAlaGluLysValGlySerSerMet
 100154 : CTCGCAGCTGCTGCGGGGCTTCGACCAGGAGATGGCCGAGAAGGTGGGCTCCTCCATG : 100210

    305 : GlnGlnLeuGlyValArgPheLeuArgLysPheValProValGlu  >>>> Target :    320
          |||||||||||||||||||||||||||||||||||||||||||||            6
          GlnGlnLeuGlyValArgPheLeuArgLysPheValProValGlu++           
 100211 : CAGCAGCTCGGCGTCCGATTCCTGCGCAAGTTCGTGCCCGTGGAGgt........... : 100260

    321 :  Intron 9 >>>>  ValGlnGlnLeuGluArgGlySerProGlyLysLeuLysVal :    333
          80 bp           |||!:!!:!||||||!:!||||||||||||:!!||||||   
                        ++ValArgArgLeuGluLysGlySerProGlyGlnLeuLys---
 100261 : ..............agGTTCGGCGGTTGGAGAAGGGGTCACCCGGGCAGCTGAAG--- : 100977

    334 : --ValAlaLysSerThrGluGlyThrGluMetIleGluGlyLeuTyrAsnThr  >>> :    351
          ##||||||:!!||||||||||||||||||||||||||||||||||||||||||     
          ##ValAlaGlnSerThrGluGlyThrGluMetIleGluGlyLeuTyrAsnThr++   
 100978 : TAGTGGCTCAATCTACGGAAGGAACAGAGATGATTGAGGGCCTTTACAACACGgt... : 101032

    352 : > Target Intron 10 >>>>  ValLeuLeuAlaIleGlyArgAspSerCysThr :    361
                 5591 bp           |||||||||||||||||||||||||||||||||
                                 ++ValLeuLeuAlaIleGlyArgAspSerCysThr
 101033 : .......................agGTTTTGTTAGCAATTGGTCGTGACTCCTGTACG : 106651

    362 : LysLysIleGlyLeuGluLysIleGlyValLysValAsnGlu{Ly}  >>>> Targe :    376
          ||||||||||||||||||||||||||||||||||||||||||{||}            
          LysLysIleGlyLeuGluLysIleGlyValLysValAsnGlu{Ly}++          
 106652 : AAGAAAATCGGGCTGGAGAAGATTGGTGTCAAAGTCAATGAG{AA}gt.......... : 106700

    377 : t Intron 11 >>>>  {s}Gln  >>>> Target Intron 12 >>>>  CysA :    379
          549 bp            {|}::!            3423 bp           ||||
                          ++{s}Arg++                          ++CysA
 106701 : ................ag{A}AGGgt..........................agTGTG : 110677

    380 : spTyrIleAsnAlaProThrValValPheThrProLeuGluTyrGlyCysCysGlyTy :    398
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          spTyrIleAsnAlaProThrValValPheThrProLeuGluTyrGlyCysCysGlyTy
 110678 : ACTATATTAATGCCCCCACCGTGGTGTTCACGCCCCTGGAGTACGGCTGCTGCGGGTA : 110734

    399 : rAlaGluGluLysAlaValGluValTyrArgLysGluAsnLeuGlu  >>>> Targe :    414
          ||||||||||||||||||||||||||||||||||||||||||||||            
          rAlaGluGluLysAlaValGluValTyrArgLysGluAsnLeuGlu++          
 110735 : CGCGGAGGAGAAAGCTGTGGAAGTGTACCGGAAGGAGAATCTGGAAgt.......... : 110784

    415 : t Intron 13 >>>>  ValTyrHisThrLeuPheTrpProLeuGluTrpThrValA :    427
          4230 bp           ||||||||||||||||||||||||||||||||||||||||
                          ++ValTyrHisThrLeuPheTrpProLeuGluTrpThrValA
 110785 : ................agGTCTACCACACTTTGTTCTGGCCTCTCGAGTGGACAGTGG : 115051

    428 : laCysArgAspSerAsnThrCysTyrAlaLysIleIleCysSerLysPheAspAsn   :    446
          || !!||||||||||||||||||||||||||||||||||||||||||!!         
          laArgArgAspSerAsnThrCysTyrAlaLysIleIleCysSerLysUnkUnkUnk--
 115052 : CCCGCAGAGACAGCAACACCTGTTACGCAAAGATCATCTGCAGTAAATTNNNNNNNnn : 115108

    447 : >>>> Target Intron 14 >>>>  AspArgValIleGlyPheHisValLeuGly :    455
                    2432 bp           ||||||||||||||||||||||||||||||
                                    ++AspArgValIleGlyPheHisValLeuGly
 115109 : ..........................agGATCGGGTGATAGGATTTCACGTCCTTGGA : 117567

    456 : ProLysAlaGlyGluIleThrGlnGlyPheAlaAlaAlaMetLysCysGlyLeuThrL :    475
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          ProLysAlaGlyGluIleThrGlnGlyPheAlaAlaAlaMetLysCysGlyLeuThrL
 117568 : CCGAAGGCCGGTGAGATCACCCAAGGATTTGCAGCCGCCATGAAGTGTGGGCTCACAA : 117627

    476 : ysGlnLeuLeuAspAspThrIleGlyIleHisProThrCysAlaGln  >>>> Targ :    491
          ||||||||||||||||||||||||||||||||||||||||||||:!!           
          ysGlnLeuLeuAspAspThrIleGlyIleHisProThrCysAlaGlu++         
 117628 : AGCAGCTGCTGGACGACACCATTGGGATCCACCCCACGTGTGCAGAGgt......... : 117677

    492 : et Intron 15 >>>>  ValPheThrThrLeuGluIleThrLysSerSerGlyLeu :    503
           214 bp            |||||||||||||||||||||||||||||||||||||||
                           ++ValPheThrThrLeuGluIleThrLysSerSerGlyLeu
 117678 : .................agGTGTTCACTACCTTGGAGATCACGAAGTCATCGGGGCTG : 117925

    504 : AspIleMetGlnLysGlyCysUnkGly :    512
          ||||||! !||||||||||||   |||
          AspIleThrGlnLysGlyCys***Gly
 117926 : GACATCACGCAGAAGGGCTGCTGAGGC : 117954

vulgar: TR3_Dolphin 0 512 . KI537815.1:subseq(385304,200299) 30764 117954 + 2315 M 1 3 5 0 2 I 0 59226 3 0 2 M 20 60 S 0 1 5 0 2 I 0 978 3 0 2 S 1 2 M 36 108 5 0 2 I 0 2191 3 0 2 M 35 105 5 0 2 I 0 231 3 0 2 M 24 72 S 0 1 5 0 2 I 0 1890 3 0 2 S 1 2 M 39 117 S 0 1 5 0 2 I 0 2001 3 0 2 S 1 2 M 47 141 5 0 2 I 0 1234 3 0 2 M 38 114 S 0 2 5 0 2 I 0 753 3 0 2 S 1 1 M 75 225 5 0 2 I 0 676 3 0 2 M 13 39 G 1 0 F 0 2 M 17 51 5 0 2 I 0 5587 3 0 2 M 25 75 S 0 2 5 0 2 I 0 545 3 0 2 S 1 1 M 1 3 5 0 2 I 0 3419 3 0 2 M 36 108 5 0 2 I 0 4226 3 0 2 M 32 96 5 0 2 I 0 2428 3 0 2 M 45 135 5 0 2 I 0 210 3 0 2 M 22 66
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2014-11-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	gene	30765	117954	2315	+	.	gene_id 1 ; sequence TR3_Dolphin ; gene_orientation +
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	30765	30767	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	30765	30767	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	30768	30769	.	+	.	intron_id 1 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	30768	89997	.	+	.	intron_id 1
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	89996	89997	.	+	.	intron_id 0 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	89998	90058	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	89998	90058	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	90059	90060	.	+	.	intron_id 2 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	90059	91040	.	+	.	intron_id 2
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	91039	91040	.	+	.	intron_id 1 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	91041	91150	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	91041	91150	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	91151	91152	.	+	.	intron_id 3 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	91151	93345	.	+	.	intron_id 3
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	93344	93345	.	+	.	intron_id 2 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	93346	93450	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	93346	93450	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	93451	93452	.	+	.	intron_id 4 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	93451	93685	.	+	.	intron_id 4
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	93684	93685	.	+	.	intron_id 3 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	93686	93758	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	93686	93758	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	93759	93760	.	+	.	intron_id 5 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	93759	95652	.	+	.	intron_id 5
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	95651	95652	.	+	.	intron_id 4 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	95653	95772	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	95653	95772	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	95773	95774	.	+	.	intron_id 6 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	95773	97777	.	+	.	intron_id 6
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	97776	97777	.	+	.	intron_id 5 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	97778	97920	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	97778	97920	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	97921	97922	.	+	.	intron_id 7 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	97921	99158	.	+	.	intron_id 7
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	99157	99158	.	+	.	intron_id 6 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	99159	99274	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	99159	99274	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	99275	99276	.	+	.	intron_id 8 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	99275	100031	.	+	.	intron_id 8
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	100030	100031	.	+	.	intron_id 7 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	100032	100257	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	100032	100257	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	100258	100259	.	+	.	intron_id 9 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	100258	100937	.	+	.	intron_id 9
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	100936	100937	.	+	.	intron_id 8 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	100938	101029	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	100938	101029	.	+	.	insertions 0 ; deletions 1 ; frameshifts 2
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	101030	101031	.	+	.	intron_id 10 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	101030	106620	.	+	.	intron_id 10
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	106619	106620	.	+	.	intron_id 9 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	106621	106697	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	106621	106697	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	106698	106699	.	+	.	intron_id 11 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	106698	107246	.	+	.	intron_id 11
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	107245	107246	.	+	.	intron_id 10 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	107247	107250	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	107247	107250	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	107251	107252	.	+	.	intron_id 12 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	107251	110673	.	+	.	intron_id 12
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	110672	110673	.	+	.	intron_id 11 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	110674	110781	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	110674	110781	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	110782	110783	.	+	.	intron_id 13 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	110782	115011	.	+	.	intron_id 13
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	115010	115011	.	+	.	intron_id 12 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	115012	115107	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	115012	115107	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	115108	115109	.	+	.	intron_id 14 ; splice_site "NN"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	115108	117539	.	+	.	intron_id 14
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	117538	117539	.	+	.	intron_id 13 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	117540	117674	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	117540	117674	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice5	117675	117676	.	+	.	intron_id 15 ; splice_site "GT"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	intron	117675	117888	.	+	.	intron_id 15
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	splice3	117887	117888	.	+	.	intron_id 14 ; splice_site "AG"
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	cds	117889	117954	.	+	.	
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	exon	117889	117954	.	+	.	insertions 0 ; deletions 0
KI537815.1:subseq(385304,200299)	exonerate:protein2genome:local	similarity	30765	117954	2315	+	.	alignment_id 1 ; Query TR3_Dolphin ; Align 30765 1 3 ; Align 89998 2 60 ; Align 91043 23 108 ; Align 93346 59 105 ; Align 93686 94 72 ; Align 95655 119 117 ; Align 97780 159 141 ; Align 99159 206 114 ; Align 100033 245 225 ; Align 100938 320 39 ; Align 100979 334 51 ; Align 106621 351 75 ; Align 107248 377 3 ; Align 110674 378 108 ; Align 115012 414 96 ; Align 117540 446 135 ; Align 117889 491 66
# --- END OF GFF DUMP ---
#

