Command line: [exonerate -m p2g --showtargetgff --exhaustive yes -q proteina.fa -t SelK.1.subseq.fa]
Hostname: [ws101071]

C4 Alignment:
------------
         Query: SelK
        Target: KI537537.1:subseq(1863488,200104) Balaenoptera acutorostrata scammoni unplaced genomic scaffold scaffold179, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 475
   Query range: 0 -> 94
  Target range: 103398 -> 56834

      1 : MetValTyrIleSerAsn{G}  >>>> Target Intron 1 >>>>  {ly}GlnV :      9
          ||||||||||||||||||{|}           3291 bp           {||}||||
          MetValTyrIleSerAsn{G}++                         ++{ly}GlnV
 103398 : ATGGTTTACATCTCGAAT{G}gt.........................ag{GA}CAAG : 100083

     10 : alLeuAspSerArgSerGlnSerProTrpArgLeuSerPheIleThrAspPhePheTr :     28
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          alLeuAspSerArgSerGlnSerProTrpArgLeuSerPheIleThrAspPhePheTr
 100082 : TGTTGGACAGCAGGAGTCAGTCCCCATGGAGATTGTCTTTTATAACGGATTTCTTCTG : 100026

     29 : pGlyIleAlaGluPheValValLeu{Ph}  >>>> Target Intron 2 >>>>   :     37
          |||||||||||||||||||||||||{||}           1437 bp           
          pGlyIleAlaGluPheValValLeu{Ph}++                         ++
 100025 : GGGAATAGCCGAGTTCGTGGTTTTG{TT}gt.........................ag :  98562

     38 : {e}PheArgThrLeuPheGlnGlnAspValLysLysArgArgGlyTyrGlySerSerS :     56
          {|}|||||||||||||||||||||||||||||||||||||||||||||||||||||||
          {e}PheArgThrLeuPheGlnGlnAspValLysLysArgArgGlyTyrGlySerSerS
  98561 : {T}TTCAGAACTCTGTTTCAGCAAGatgtgaaaaagagaagaggCTACGGAAGCTCAT :  98505

     57 : erAspSerArgTyrAspAspGlyArg{Gl}  >>>> Target Intron 3 >>>>  :     65
          ||||||||||||||||||||||||||{||}            609 bp          
          erAspSerArgTyrAspAspGlyArg{Gl}++                         +
  98504 : CTGATTCCAGATATGATGATGGAAGA{gg}gt.........................a :  97869

     66 :  {y}ProProGlyAsnProProArgArgMetGlyArgIleAsnHisLeuArgGlyPro :     83
           {|}||||||||||||||||||||||||||||||||||||||||||||||||||||||
          +{y}ProProGlyAsnProProArgArgMetGlyArgIleAsnHisLeuArgGlyPro
  97868 : g{G}CCACCAGGAAACCCCCCCAGAAGAATGGGTCGAATTAATCATCTGCGTGGCCCT :  97815

     84 : AsnProProProMetAlaGlyGlyUnkGly{Ar}  >>>> Target Intron 4 > :     94
          ||||||||||||||||||||||||   |||{||}           40945 bp     
          AsnProProProMetAlaGlyGly***Gly{Ar}++                      
  97814 : AATCCTCCTCCAATGGCCGGTGGATGAGGA{AG}gt...................... :  97778

     95 : >>>  {g} :     94
               {|}
             ++{g}
  97777 : ...ag{g} :  56835

vulgar: SelK 0 94 . KI537537.1:subseq(1863488,200104) 103398 56834 - 475 M 6 18 S 0 1 5 0 2 I 0 3287 3 0 2 S 1 2 M 29 87 S 0 2 5 0 2 I 0 1433 3 0 2 S 1 1 M 27 81 S 0 2 5 0 2 I 0 605 3 0 2 S 1 1 M 28 84 S 0 2 5 0 2 I 0 40941 3 0 2 S 1 1
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2014-11-19
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	gene	56835	103398	475	-	.	gene_id 1 ; sequence SelK ; gene_orientation +
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	cds	103380	103398	.	-	.	
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	exon	103380	103398	.	-	.	insertions 0 ; deletions 0
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	splice5	103378	103379	.	-	.	intron_id 1 ; splice_site "GT"
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	intron	100089	103379	.	-	.	intron_id 1
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	splice3	100089	100090	.	-	.	intron_id 0 ; splice_site "AG"
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	cds	99998	100088	.	-	.	
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	exon	99998	100088	.	-	.	insertions 0 ; deletions 0
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	splice5	99996	99997	.	-	.	intron_id 2 ; splice_site "GT"
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	intron	98561	99997	.	-	.	intron_id 2
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	splice3	98561	98562	.	-	.	intron_id 1 ; splice_site "AG"
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	cds	98477	98560	.	-	.	
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	exon	98477	98560	.	-	.	insertions 0 ; deletions 0
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	splice5	98475	98476	.	-	.	intron_id 3 ; splice_site "gt"
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	intron	97868	98476	.	-	.	intron_id 3
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	splice3	97868	97869	.	-	.	intron_id 2 ; splice_site "AG"
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	cds	97781	97867	.	-	.	
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	exon	97781	97867	.	-	.	insertions 0 ; deletions 0
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	splice5	97779	97780	.	-	.	intron_id 4 ; splice_site "GT"
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	intron	56836	97780	.	-	.	intron_id 4
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	splice3	56836	56837	.	-	.	intron_id 3 ; splice_site "ag"
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	utr3b	56835	56835	.	-	.	
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	exon	56835	56835	.	-	.	insertions 0 ; deletions 0
KI537537.1:subseq(1863488,200104)	exonerate:protein2genome:local	similarity	56835	103398	475	-	.	alignment_id 1 ; Query SelK ; Align 103399 1 18 ; Align 100087 8 87 ; Align 98560 38 81 ; Align 97867 66 84
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis
