------- SECIS element -- id:1 -- grade:C ----
 Chromosome = KK951189.1:subseq_426542,15422_ Strand = - Positions = 293 - 221
 Found by:  Covels (score=0.47) SECISearch1.0 (pattern=loose+)
 Stem2 length = 8   Apical loop length = 11   Insertion in stem2 = 0, 0
 Free Energy = -6.19

         ..(((((((............(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcg-----UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ....({((((...........([[(({{(((((((------...........)))))))}}))]])..--...))))})--..
 target  GCUGUCUGGGAAaguuuACUGUGAAGCUGGCUUCU------GCCCUUAGCAAGGGAGUCCCCUGAGGG--GUCCCUGAA--GU
                              ****                 ^^                  ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = KK951189.1:subseq_426542,15422_ Strand = + Positions = 8806 - 8879
 Found by:  SECISearch1.0 (pattern=loose+)
 Stem2 length = 9   Apical loop length = 16   Insertion in stem2 = 1, 0
 Free Energy = -5.4

         ..(((((((.......((((((((((.(((((....................)))))))))))))))...........)))))))..
 model   uucggucaugcgUuaAUGAcGgccug-gcccuAAAcC-----cuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc
         ....(((--.--....([[(({(((.[((((------(..............)))))])))}))]]).......-...--)))....
 target  CUCACUU--C--UGUCUGAUGAGCUGaCGGG------ccuguCUGCACGUCUGCCUGGGGCACAGAGGUGggAc-CCU--GAGCUAG
                         ****                 ^^                        ****                    

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = KK951189.1:subseq_426542,15422_ Strand = + Positions = 7777 - 7866
 Found by:  SECISearch1.0 (pattern=loose+)
 Stem2 length = 10   Apical loop length = 28   Insertion in stem2 = 0, 1
 Free Energy = -4.55

         ..(((((((...........(((((((((((((((..........................))))))))).))))))........)))))))..
 model   uucggucaugcg----UuaAUGAcGgccuggcccuAAAcC-----------cuuuuuggggcgggccagg-cCuGAUGuuuuuucaugaccggc
         ((([[(({(...........([[[(((([(((((............................)))))])).))]]])..--.--.)}))]])))
 target  CUGGGCCCUGCUccccUGGGUGAGGGUCAGCUCUGAACCUgcaggcccaggGACCCAGGGAGGGGGUGGGuCCAGAGGG--A--GGUGGAACAG
                             ****           ^^                                    ****                 

