
genewise output
Score 15.96 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000883_2.0  132 GDPAQQGGTLILGP                                    
                     G  AQ+GGTL   P                                    
                     GASAQEGGTLRTDP                                    
KK952962.1:subs 7931 ggtgcgggaccagc                                    
                     gcccaaggctgcac                                    
                     aacgggtcgccccc                                    


//
>KK952962.1:subseq(202909,8677).pep
GASAQEGGTLRTDP
//
>KK952962.1:subseq(202909,8677).[7931:7972].sp
GGAGCATCCGCGCAGGAGGGTGGCACGCTCCGCACCGACCCC
//
KK952962.1:subseq(202909,8677)	GeneWise	match	7931	7972	15.96	+	.	KK952962.1:subseq(202909,8677)-genewise-prediction-1
KK952962.1:subseq(202909,8677)	GeneWise	cds	7931	7972	0.00	+	0	KK952962.1:subseq(202909,8677)-genewise-prediction-1
//

genewise output
Score 356.69 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000883_2.0    1 LGTSRLRLPFVLLFRERRAVVVFMR                       H 
                     L  S  R+PF  LFRERRAVVVF+R                       H 
                     LDASGRRVPFGALFRERRAVVVFVR                       H 
KK952962.1:subs-8608 cggtgacgctggctcgccggggtgcGTGAGCG  Intron 1   CAGc 
                     taccgggtctgcttgaggctttttg<0-----[8533 : 8123]-0>a 
                     gcccgggggccggcggcccggccgg                       t 


SPP00000883_2.0   27 FLCYICKEYVEDLAKIPKSFLQ                       EANV 
                     FLCYICKEYVEDLAKIPKSFLQ                       EA+V 
                     FLCYICKEYVEDLAKIPKSFLQ                       EADV 
KK952962.1:subs-8119 tcttatagtgggcgaacaattcGTGAGTT  Intron 2   AAGgggg 
                     ttgatgaaataatcatcagtta<0-----[8053 : 7165]-0>acat 
                     cgtcccgacaatgcaccgtcaa                       aatc 


SPP00000883_2.0   53 TLIVIGQSSYHHIE                       PFCKLTGYSHEI 
                     TLIVIGQSSYHHIE                       PFCKLTGYSHEI 
                     TLIVIGQSSYHHIE                       PFCKLTGYSHEI 
KK952962.1:subs-7152 acagagctttccagGTAAATA  Intron 3   CAGcttacagttcga 
                     cttttgaccaaata<0-----[7110 : 6942]-0>ctgatcgacaat 
                     ctagtagacctttg                       cccagtgtttac 


SPP00000883_2.0   79 YVDPEREIYKRLGMKRGEEIAFS                           
                     YVDPEREIYKRLGMKRGEEIAFS                           
                     YVDPEREIYKRLGMKRGEEIAFS          G:G[gga]         
KK952962.1:subs-6905 tggcgagataatgaaagggagttGGTGAGAC  Intron 4   CAGGA 
                     atacagataagtgtaggaatctc <1-----[6835 : 3148]-1>   
                     ttctgaattaagagaataaccta                           


SPP00000883_2.0  103 KSPHIKSNILSGSIRSLWRAMTGPLFDFQGDPAQQGGTLILGP       
                     KSPHIKSNILSGSIRSLWRAMTGPLFDFQGDPAQQGGTLILGP       
                     KSPHIKSNILSGSIRSLWRAMTGPLFDFQGDPAQQGGTLILGP       
KK952962.1:subs-3145 aaccaataactgaacactcgaagcctgtcggcgccggacatgc       
                     agcatacattcggtggtggctcgcttatagaccaaggctttgc       
                     acctagatacaactgcggcagcctttttaacgtggcacctata       


SPP00000883_2.0  146                           NNIHFIHCDRNRLDHKPINAVLQ 
                                               NNIHFIHCDRNRLDHKPINAVLQ 
                               G:G[ggt]        NNIHFIHCDRNRLDHKPINAVLQ 
KK952962.1:subs-3016 GGTAAGTA  Intron 5   TAGGTaaactactgaaatgcacaaggtc 
                      <1-----[3015 : 1125]-1>  aatattagagagtaaactactta 
                                               ctcttccttgtggtcacccttag 


SPP00000883_2.0  170 LVGVQPVDFTGRPSVTHV                                
                     LVGVQPVDFTGRPSVTHV                                
                     LVGVQPVDFTGRPSVTHV                                
KK952962.1:subs-1053 cgggccggtagactgacg                                
                     ttgtactatcggcctcat                                
                     taatgtgctacgtatccg                                


//
Making a G in phase 1 intron
Making a G in phase 1 intron
>KK952962.1:subseq(202909,8677).pep
LDASGRRVPFGALFRERRAVVVFVRHFLCYICKEYVEDLAKIPKSFLQEADVTLIVIGQS
SYHHIEPFCKLTGYSHEIYVDPEREIYKRLGMKRGEEIAFSGKSPHIKSNILSGSIRSLW
RAMTGPLFDFQGDPAQQGGTLILGPGNNIHFIHCDRNRLDHKPINAVLQLVGVQPVDFTG
RPSVTHV
//
>KK952962.1:subseq(202909,8677).[8608:998].sp
CTGGACGCCTCCGGGAGGCGGGTGCCGTTCGGCGCGCTGTTCCGGGAGCGCCGCGCCGTG
GTGGTCTTCGTGCGGCATTTCCTGTGTTACATCTGCAAGGAATACGTAGAAGATCTGGCC
AAAATCCCCAAGAGTTTCTTACAAGAAGCAGATGTCACCCTTATAGTGATTGGACAGTCA
TCCTACCATCATATTGAGCCCTTCTGCAAACTGACTGGGTATTCTCATGAAATCTATGTT
GACCCTGAGAGAGAAATTTATAAAAGATTGGGAATGAAAAGAGGTGAAGAAATCGCCTTT
TCAGGAAAAAGCCCCCATATAAAGTCAAATATACTCTCAGGAAGCATTCGGAGCCTGTGG
CGCGCAATGACCGGCCCTCTTTTTGATTTTCAAGGAGACCCGGCTCAGCAGGGCGGAACC
CTCATTTTAGGTCCAGGTAACAATATCCATTTTATCCACTGTGATAGGAATAGGTTGGAT
CACAAACCCATCAACGCTGTTTTACAGCTTGTAGGAGTTCAGCCTGTGGACTTTACAGGC
AGGCCTTCAGTTACCCACGTG
//
KK952962.1:subseq(202909,8677)	GeneWise	match	8608	1000	356.69	-	.	KK952962.1:subseq(202909,8677)-genewise-prediction-1
KK952962.1:subseq(202909,8677)	GeneWise	cds	8608	8534	0.00	-	0	KK952962.1:subseq(202909,8677)-genewise-prediction-1
KK952962.1:subseq(202909,8677)	GeneWise	intron	8533	8123	0.00	-	.	KK952962.1:subseq(202909,8677)-genewise-prediction-1
KK952962.1:subseq(202909,8677)	GeneWise	cds	8122	8054	0.00	-	0	KK952962.1:subseq(202909,8677)-genewise-prediction-1
KK952962.1:subseq(202909,8677)	GeneWise	intron	8053	7165	0.00	-	.	KK952962.1:subseq(202909,8677)-genewise-prediction-1
KK952962.1:subseq(202909,8677)	GeneWise	cds	7164	7111	0.00	-	0	KK952962.1:subseq(202909,8677)-genewise-prediction-1
KK952962.1:subseq(202909,8677)	GeneWise	intron	7110	6942	0.00	-	.	KK952962.1:subseq(202909,8677)-genewise-prediction-1
KK952962.1:subseq(202909,8677)	GeneWise	cds	6941	6836	0.00	-	0	KK952962.1:subseq(202909,8677)-genewise-prediction-1
KK952962.1:subseq(202909,8677)	GeneWise	intron	6835	3148	0.00	-	.	KK952962.1:subseq(202909,8677)-genewise-prediction-1
KK952962.1:subseq(202909,8677)	GeneWise	cds	3147	3016	0.00	-	2	KK952962.1:subseq(202909,8677)-genewise-prediction-1
KK952962.1:subseq(202909,8677)	GeneWise	intron	3015	1125	0.00	-	.	KK952962.1:subseq(202909,8677)-genewise-prediction-1
KK952962.1:subseq(202909,8677)	GeneWise	cds	1124	1000	0.00	-	2	KK952962.1:subseq(202909,8677)-genewise-prediction-1
//
