
genewise output
Score 19.47 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000870_2.0  144 FGRGSSGVSVFVLYLLLWVVLFSF                          
                     F  G S +S+F L   L +++F+F                          
                     FWSGYSIISMFHLIYFLQIIIFNF                          
KK950007.1:subs15010 ttagtaaatatccattccaaatat                          
                     tgggagttcttattattattttat                          
                     tgtattactgttactcaaaacctt                          


//
>KK950007.1:subseq(1076742,24520).pep
FWSGYSIISMFHLIYFLQIIIFNF
//
>KK950007.1:subseq(1076742,24520).[15010:15081].sp
TTTTGGAGTGGATATAGTATAATCTCTATGTTTCATCTAATCTATTTCCTACAAATAATA
ATCTTCAATTTT
//
KK950007.1:subseq(1076742,24520)	GeneWise	match	15010	15081	19.47	+	.	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	cds	15010	15081	0.00	+	0	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
//

genewise output
Score 801.71 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000870_2.0   19 KYSAVDTNPLSLYIMHPFWNTVVK                       VF 
                     +YSAVDTNPLSLYIMHPFWNTVVK                       VF 
                     QYSAVDTNPLSLYIMHPFWNTVVK                       VF 
KK950007.1:sub-23520 ctagggaacctctaaccttaaggaGTAAGAT  Intron 1   TAGgt 
                     aagctacactctattactgactta<0-----[23448:22786]-0>tt 
                     gcttatctactgtcgtacgctaag                       at 


SPP00000870_2.0   45 PTWLAPNLITFSGFLLVVFNFLFMAYFDPDFYAS                
                     PTWLAPNLITFSGFLLVVFNFLFMAYFDPDFYAS                
                     PTWLAPNLITFSGFLLVVFNFLFMAYFDPDFYAS                
KK950007.1:sub-22779 catcgcacaattgtccggtatctagttgcgttgt                
                     ccgtccattctcgttttttattttcatacatacc                
                     ttgttatgccttctggtactcatgactttcttta                


SPP00000870_2.0   79                           PGHKHVPDWVWIVVGILNFIAYT 
                                               PGHKHVPDWVWIVVGILNFIAYT 
                               A:A[gca]        PGHKHVPDWVWIVVGILNFIAYT 
KK950007.1:sub-22677 GGTAAGAT  Intron 2   CAGCAcgcacgcgtgtagggacatagta 
                      <1-----[22676:20555]-1>  cgaaatcagtgtttgttattcac 
                                               atcgccctgtgtagcccccacct 


SPP00000870_2.0  103 L                          GVDGKQARRTNSSTPLGELFDH 
                     L                          GVDGKQARRTNSSTPLGELFDH 
                     L          D:D[gat]        GVDGKQARRTNSSTPLGELFDH 
KK950007.1:sub-20483 cGGTAAGCA  Intron 3   CAGATggggacgcaaataactggctgc 
                     t <1-----[20479:16722]-1>  gtagaacggcacgcctgattaa 
                     a                          tgtagactacttcctaggtcct 


SPP00000870_2.0  127 GLDSWSCVYFVVTVYSIFGRGSSGVSVFVLYLLLWVVLFSFILSHWEKY 
                     GLDSWSCVYFVVTVYSIFGRGSSGVSVFVLYLLLWVVLFSFILSHWEKY 
                     GLDSWSCVYFVVTVYSIFGRGSSGVSVFVLYLLLWVVLFSFILSHWEKY 
KK950007.1:sub-16653 gcgatttgttggagttatgcgttggagtgctccctggttttactctgat 
                     gtaggcgtatttctacttgggccgtgttttatttgttttctttcagaaa 
                     cgctgattcttctgtcctaaaattctgttttcgagatgttccgtcgagt 


SPP00000870_2.0  176 NTGILFLPWGYDISQV                       TISFVYIVTA 
                     NTGILFLPWGYDISQV                       TISFVYIVTA 
                     NTGILFLPWGYDISQV                       TISFVYIVTA 
KK950007.1:sub-16506 aagactcctgtgaacgGTAAGTA  Intron 4   TAGaattgtagag 
                     acgttttcggaatgat<0-----[16458:15515]-0>ctcttattcc 
                     cagttcgggatctcgg                       ttttccagtg 


SPP00000870_2.0  202 IVGVEAWYEPFLFNFLYRDLFTTMII                        
                     IVGVEAWYEPFLFNFLYRDLFTTMII                        
                     IVGVEAWYEPFLFNFLYRDLFTTMII          G:G[ggt]      
KK950007.1:sub-15484 agggggttgctctatttagctaaaaaGGTAAGAA  Intron 5      
                     ttgtacgaactttattagattccttt <1-----[15405: 7429]   
                     tgatgcgtatcgttcatacactagtt                        


SPP00000870_2.0  228      CALCVTLPMSLLNFF                          SYK 
                          CALCVTLPMSLLNFF                          SYK 
                          CALCVTLPMSLLNFF           R:R[aga]       SYK 
KK950007.1:subs-7431 TAGGTtgttgaccaattattAGGTAAGTA  Intron 6   CAGAata 
                     -1>  gctgtctctgttatt  <2-----[7379 : 5733]-2> gaa 
                          tggtgttagtaactc                          cta 


SPP00000870_2.0  248 NNTLKHNSVYEVLVPFFSPCLLFVLSTAWILRSPSDILERHPRVFYFMV 
                     NNTLKHNSVYEVLVPFFSPCLLFVLSTAWILRSPSDILERHPRVFYFMV 
                     NNTLKHNSVYEVLVPFFSPCLLFVLSTAWILRSPSDILERHPRVFYFMV 
KK950007.1:subs-5722 aaatacatgtggtgctttcttctgttagtacctctgatgaccagtttag 
                     aactaaactaatttcttccgtttttcccgttgcccattagacgttattt 
                     tccgactaccatgtccttctgcctgtaggccgacattagactaccctgc 


SPP00000870_2.0  297 GTAFANST                       CQLIVCQMSSTRCPTLNW 
                     GTAFANST                       CQLIVCQMSSTRCPTLNW 
                     GTAFANST                       CQLIVCQMSSTRCPTLNW 
KK950007.1:subs-5575 gagtgaaaGTAAGAC  Intron 7   AAGtccagtcaaaactcatat 
                     gcctcagc<0-----[5551 : 4095]-0>gatttgatggcggcctag 
                     aactccca                       tggcttagcttccatgtg 


SPP00000870_2.0  323 LLLPLFLVVMVINLGVASYIENILLFTLTTAFTLAHIHYGVRV       
                     LLLPLFLVVMVINLGVASYIENILLFTLTTAFTLAHIHYGVRV       
                     LLLPLFLVVMVINLGVASYIENILLFTLTTAFTLAHIHYGVRV       
KK950007.1:subs-4040 tccccttggagaatgggttagaacctataagtacgcactggcg       
                     tttcttttttttatgtccataattttctccctctcataagtgt       
                     ggttccgtcggacaaactctgctcgtgaattctgcccttaaag       


SPP00000870_2.0  366                        VKQLSSHFQIYPFSLRKPNSDXLGME 
                                            VKQLSSHFQIYPFSLRKPNSDXLGME 
                                            VKQLSSHFQIYPFSLRKPNSDXLGME 
KK950007.1:subs-3911 GTGAGTA  Intron 8   TAGgaccaactcatctttaacatgtcgag 
                     <0-----[3911 : 1096]-0>taatggatatactctgacacagtgta 
                                            agggccttgtcacaggaacgtaaaga 


SPP00000870_2.0  392 EKNIGL                                            
                     EKNIGL                                            
                     EKNIGL                                            
KK950007.1:subs-1017 gaaagc                                            
                     aaatgt                                            
                     agttcg                                            


//
Making a A in phase 1 intron
Making a D in phase 1 intron
Making a G in phase 1 intron
Making a R in phase 2 intron
>KK950007.1:subseq(1076742,24520).pep
QYSAVDTNPLSLYIMHPFWNTVVKVFPTWLAPNLITFSGFLLVVFNFLFMAYFDPDFYAS
APGHKHVPDWVWIVVGILNFIAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWSCVYFVV
TVYSIFGRGSSGVSVFVLYLLLWVVLFSFILSHWEKYNTGILFLPWGYDISQVTISFVYI
VTAIVGVEAWYEPFLFNFLYRDLFTTMIIGCALCVTLPMSLLNFFRSYKNNTLKHNSVYE
VLVPFFSPCLLFVLSTAWILRSPSDILERHPRVFYFMVGTAFANSTCQLIVCQMSSTRCP
TLNWLLLPLFLVVMVINLGVASYIENILLFTLTTAFTLAHIHYGVRVVKQLSSHFQIYPF
SLRKPNSDXLGMEEKNIGL
//
>KK950007.1:subseq(1076742,24520).[23520:998].sp
CAGTACAGTGCTGTAGATACCAATCCACTCTCTCTGTATATCATGCATCCATTCTGGAAC
ACTGTAGTAAAGGTATTTCCTACTTGGCTTGCTCCAAATCTGATCACCTTTTCTGGCTTT
CTGCTGGTTGTATTCAATTTCCTATTTATGGCATACTTTGATCCTGACTTTTATGCTTCA
GCACCAGGTCACAAGCACGTCCCCGATTGGGTTTGGATTGTAGTGGGCATCCTCAACTTC
ATAGCCTACACTCTAGATGGTGTGGATGGAAAGCAAGCCCGTAGAACCAATTCTAGCACC
CCTTTAGGGGAGCTTTTCGACCATGGCCTGGACAGTTGGTCATGTGTTTACTTTGTTGTC
ACTGTGTATTCCATCTTTGGACGAGGATCATCTGGTGTCAGTGTGTTTGTTCTTTATCTC
CTGCTATGGGTAGTTTTGTTTTCTTTCATCCTGTCTCACTGGGAAAAGTATAACACAGGG
ATTCTTTTCCTGCCGTGGGGATATGACATTAGCCAGGTGACTATTTCTTTTGTCTACATA
GTGACTGCGATTGTGGGAGTTGAGGCCTGGTATGAACCTTTCCTGTTTAATTTCTTATAT
AGAGACCTATTCACTACAATGATTATTGGTTGTGCGTTGTGTGTGACTCTTCCAATGAGT
TTATTAAACTTTTTCAGAAGCTATAAAAATAACACCTTGAAACACAATTCAGTCTACGAA
GTTTTGGTTCCCTTCTTTTCTCCCTGTTTGCTCTTCGTTTTGTCTACAGCGTGGATCCTC
CGGTCACCCTCAGATATTTTAGAGAGACACCCTAGAGTCTTCTACTTTATGGTCGGAACA
GCCTTTGCCAACAGCACATGTCAGCTGATCGTTTGTCAAATGAGCAGTACTCGCTGCCCA
ACTTTGAATTGGTTGCTGCTTCCTCTCTTCTTGGTTGTCATGGTGATAAACTTAGGAGTA
GCCTCTTACATTGAGAACATTCTCCTGTTTACGTTAACAACTGCTTTCACTCTGGCCCAC
ATCCATTATGGAGTACGAGTGGTAAAGCAGCTGAGCAGCCATTTTCAGATTTACCCATTC
TCATTGAGGAAACCAAACTCGGATTGACTAGGAATGGAAGAAAAGAATATTGGCCTG
//
KK950007.1:subseq(1076742,24520)	GeneWise	match	23520	1000	801.71	-	.	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	cds	23520	23449	0.00	-	0	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	intron	23448	22786	0.00	-	.	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	cds	22785	22677	0.00	-	0	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	intron	22676	20555	0.00	-	.	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	cds	20554	20480	0.00	-	2	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	intron	20479	16722	0.00	-	.	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	cds	16721	16459	0.00	-	2	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	intron	16458	15515	0.00	-	.	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	cds	15514	15406	0.00	-	0	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	intron	15405	7429	0.00	-	.	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	cds	7428	7380	0.00	-	2	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	intron	7379	5733	0.00	-	.	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	cds	5732	5552	0.00	-	1	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	intron	5551	4095	0.00	-	.	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	cds	4094	3912	0.00	-	0	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	intron	3911	1096	0.00	-	.	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
KK950007.1:subseq(1076742,24520)	GeneWise	cds	1095	1000	0.00	-	0	KK950007.1:subseq(1076742,24520)-genewise-prediction-1
//
