
genewise output
Score 18.63 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000861_2.0  142 GLITTDIREGQTFYYAEDYHQQYLSKNP                      
                     G+++T I EG +F  + D +     K+P                      
                     GVVSTHIGEGISFTQSTDSNANLFQKHP                      
KK950289.1:subs96872 gggtacagggattactagtagactcacc                      
                     gttccatgagtctcaccacacattaaac                      
                     gggcccttggccttgtctatctccgact                      


//
>KK950289.1:subseq(48419,142255).pep
GVVSTHIGEGISFTQSTDSNANLFQKHP
//
>KK950289.1:subseq(48419,142255).[96872:96955].sp
GGGGTGGTGTCCACCCACATTGGTGAGGGGATCTCCTTTACTCAGTCTACCGATTCAAAT
GCCAATCTCTTCCAGAAACACCCT
//
KK950289.1:subseq(48419,142255)	GeneWise	match	96872	96955	18.63	+	.	KK950289.1:subseq(48419,142255)-genewise-prediction-1
KK950289.1:subseq(48419,142255)	GeneWise	cds	96872	96955	0.00	+	0	KK950289.1:subseq(48419,142255)-genewise-prediction-1
//

genewise output
Score 296.70 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000861_2.0    1 AKHHVSGNRTVEPFPEGTQMAVF                           
                     AKHHVSGNRTVEPFPEGTQMAVF                           
                     AKHHVSGNRTVEPFPEGTQMAVF          G:G[gga]         
KK950289.1:su-141255 gaccgagaaaggctcggacaggtGGTAAGAT  Intron 1   TAGGA 
                     caaatggagctactcagcatctt <1-----[141185:94599-1>   
                     cattctccaatatcagaaggtat                           


SPP00000861_2.0   25 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCS           
                     MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCS           
                     MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCS           
KK950289.1:sub-94596 agtttgggaattacaggttacggtgggtacacataggtt           
                     tggtggcagatgctagtaccatgtcggaccaccaaatgc           
                     gttcgacagacgcgaagtctatctaacctcttttaacca           


SPP00000861_2.0   64                           KTGHAEVVRVVYQPERISFEELL 
                                               KTGHAEVVRVVYQPERISFEELL 
                               G:G[gga]        KTGHAEVVRVVYQPERISFEELL 
KK950289.1:sub-94479 GGTAGGAA  Intron 2   AAGGAaagcggggcggtccgcaatggcc 
                      <1-----[94478:27833]-1>  acgacattgttaacagtgtaatt 
                                               acctaaacaggcgaaccctgagc 


SPP00000861_2.0   88 KVFWENHDPTQ                          MRQGNDYGSQYR 
                     KVFWENHDPTQ                          MRQGNDYGSQYR 
                     KVFWENHDPTQ          G:G[ggc]        MRQGNDYGSQYR 
KK950289.1:sub-27761 agttgacgcacGGTAGATG  Intron 3   CAGGCaccgagtgtctc 
                     attgaaaacca <1-----[27727: 1110]-1>  tgagaaagcaag 
                     gccggttcgca                          gcactccctgcc 


SPP00000861_2.0  112 SAIYPTSADHMEAALRSKEDYQKV                          
                     SAIYPTSA HMEAALRSKEDYQKV                          
                     SAIYPTSAHHMEAALRSKEDYQKV                          
KK950289.1:subs-1071 tgatcatgccagggcataggtcag                          
                     cctaccccaatacctgcaaaaaat                          
                     acccactgccgggcggcagccgga                          


//
Making a G in phase 1 intron
Making a G in phase 1 intron
Making a G in phase 1 intron
>KK950289.1:subseq(48419,142255).pep
AKHHVSGNRTVEPFPEGTQMAVFGMGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKE
VCSGKTGHAEVVRVVYQPERISFEELLKVFWENHDPTQGMRQGNDYGSQYRSAIYPTSAH
HMEAALRSKEDYQKV
//
>KK950289.1:subseq(48419,142255).[141255:998].sp
GCCAAACATCATGTCAGTGGCAACAGAACAGTTGAACCTTTCCCAGAGGGAACACAGATG
GCTGTATTTGGAATGGGTTGTTTCTGGGGAGCCGAAAGGAAATTCTGGACCCTGAAAGGA
GTGTATTCCACTCAAGTTGGCTTTGCAGGAGGCTACACTCCCAATCCTACTTATAAAGAA
GTCTGCTCAGGAAAAACCGGCCATGCAGAAGTAGTCCGAGTGGTGTACCAGCCAGAACGC
ATCAGCTTTGAGGAACTGCTCAAGGTCTTCTGGGAGAATCATGACCCGACCCAAGGCATG
CGCCAAGGCAATGACTACGGCTCTCAGTACCGCTCAGCCATCTACCCAACCTCTGCGCAC
CACATGGAGGCGGCCCTGAGGTCCAAAGAGGACTACCAGAAGGTA
//
KK950289.1:subseq(48419,142255)	GeneWise	match	141255	1000	296.70	-	.	KK950289.1:subseq(48419,142255)-genewise-prediction-1
KK950289.1:subseq(48419,142255)	GeneWise	cds	141255	141186	0.00	-	0	KK950289.1:subseq(48419,142255)-genewise-prediction-1
KK950289.1:subseq(48419,142255)	GeneWise	intron	141185	94599	0.00	-	.	KK950289.1:subseq(48419,142255)-genewise-prediction-1
KK950289.1:subseq(48419,142255)	GeneWise	cds	94598	94479	0.00	-	2	KK950289.1:subseq(48419,142255)-genewise-prediction-1
KK950289.1:subseq(48419,142255)	GeneWise	intron	94478	27833	0.00	-	.	KK950289.1:subseq(48419,142255)-genewise-prediction-1
KK950289.1:subseq(48419,142255)	GeneWise	cds	27832	27728	0.00	-	2	KK950289.1:subseq(48419,142255)-genewise-prediction-1
KK950289.1:subseq(48419,142255)	GeneWise	intron	27727	1110	0.00	-	.	KK950289.1:subseq(48419,142255)-genewise-prediction-1
KK950289.1:subseq(48419,142255)	GeneWise	cds	1109	1000	0.00	-	2	KK950289.1:subseq(48419,142255)-genewise-prediction-1
//
