
genewise output
Score 444.90 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000852_2.0    1 MAYIAKSFYDLSAISLDGEKIDFNTFRGRAVLIENVASLXGTTTRDFTQ 
                     MAYIAKSFYDLSAISLDGEKIDFNTFRGRAVLIENVASLXGTTTRDFTQ 
                     MAYIAKSFYDLSAISLDGEKIDFNTFRGRAVLIENVASLXGTTTRDFTQ 
KK950321.1:subs 1000 agtagatttgcagaacgggaagtaatcgaggcagaggtctgaaacgtac 
                     tcatcactaatgctgtagaatatactgggctttaatcctggcccgatca 
                     gtcttgcccctttccgtgggatctacacggggtgtgcacacatcgcccg 


SPP00000852_2.0   50 LNELQCRFPRRLVVLGFPCNQFGHQ                       E 
                     LNELQCRFPRRLVVLGFPCNQFGHQ                       E 
                     LNELQCRFPRRLVVLGFPCNQFGHQ                       E 
KK950321.1:subs 1147 cagcctctcaccggcgtctactgccGTGAGGG  Intron 1   CAGg 
                     taataggtcggttttgtcgaatgaa<0-----[1222 : 3732]-0>a 
                     ccgggcctcgcggtcccgccatatg                       g 


SPP00000852_2.0   76 NCQNEEILNSLKYVRPGGGFQPTFTLVQKCEVNGQNQHPVFAYLKDKLP 
                     NCQNEEILNSLKYVRPGGGFQPTFTLVQKCEVNGQNQHPVFAYLKDKLP 
                     NCQNEEILNSLKYVRPGGGFQPTFTLVQKCEVNGQNQHPVFAYLKDKLP 
KK950321.1:subs 3736 atcaggacaacatgccgggtccatacgcatggagcacccgtgtcagacc 
                     agaaaattagtaatgcgggtacctcttaagatagaaaacttcataaatc 
                     ctgtggcgctcgtcctgtacgcctctcagtagttgcgttccccggcgcc 


SPP00000852_2.0  125 YPYDDPLSLMTDPKFIIWSPVCRSDVSWNFEKFLIGPEGEPFRRYSRTF 
                     YPYDDPLSLMTDPKFIIWSPVCRSDVSWNFEKFLIGPEGEPFRRYSRTF 
                     YPYDDPLSLMTDPKFIIWSPVCRSDVSWNFEKFLIGPEGEPFRRYSRTF 
KK950321.1:subs 3883 tctggcctcaagcataatacgtctggttatgatcagcgggctcctacat 
                     acaaactcttcacatttggctggcatcgataatttgcagactggaggct 
                     ctttcatctgctcgcctgcggccatgcgctggcttgagggccacccccc 


SPP00000852_2.0  174 PTINIEPDIKRLLKVAI                                 
                     PTINIEPDIKRLLKVAI                                 
                     PTINIEPDIKRLLKVAI                                 
KK950321.1:subs 4030 caaaagcgaacccagga                                 
                     cctatacatagttatct                                 
                     cccctgtccgcccatca                                 


//
>KK950321.1:subseq(739531,5080).pep
MAYIAKSFYDLSAISLDGEKIDFNTFRGRAVLIENVASLXGTTTRDFTQLNELQCRFPRR
LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGFQPTFTLVQKCEVNGQNQHPVFAYLK
DKLPYPYDDPLSLMTDPKFIIWSPVCRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEP
DIKRLLKVAI
//
>KK950321.1:subseq(739531,5080).[1000:4080].sp
ATGGCTTACATTGCTAAGTCCTTCTACGACCTTAGTGCTATCAGCCTGGATGGGGAGAAG
ATAGATTTCAATACATTCCGAGGCAGGGCGGTGCTGATTGAGAATGTGGCCTCACTCTGA
GGCACAACTACCCGGGACTTCACCCAGCTCAACGAGCTGCAGTGCCGCTTTCCCAGGCGC
CTGGTGGTTCTCGGCTTCCCGTGCAACCAATTTGGACATCAGGAGAACTGTCAGAATGAG
GAGATCCTGAACAGTCTCAAGTATGTCCGCCCTGGGGGTGGATTCCAGCCCACCTTTACC
CTTGTCCAAAAGTGTGAAGTGAATGGTCAGAACCAGCATCCTGTCTTCGCCTACCTGAAG
GACAAGCTCCCCTACCCTTATGATGACCCACTTTCCCTTATGACCGATCCCAAGTTCATC
ATTTGGAGCCCGGTGTGCCGCTCAGATGTGTCCTGGAACTTTGAGAAGTTCCTTATTGGG
CCAGAGGGGGAGCCCTTCCGACGCTACAGCCGCACCTTCCCCACCATCAACATTGAGCCT
GACATCAAGCGCCTCCTCAAAGTTGCCATA
//
KK950321.1:subseq(739531,5080)	GeneWise	match	1000	4080	444.90	+	.	KK950321.1:subseq(739531,5080)-genewise-prediction-1
KK950321.1:subseq(739531,5080)	GeneWise	cds	1000	1221	0.00	+	0	KK950321.1:subseq(739531,5080)-genewise-prediction-1
KK950321.1:subseq(739531,5080)	GeneWise	intron	1222	3732	0.00	+	.	KK950321.1:subseq(739531,5080)-genewise-prediction-1
KK950321.1:subseq(739531,5080)	GeneWise	cds	3733	4080	0.00	+	0	KK950321.1:subseq(739531,5080)-genewise-prediction-1
//

genewise output
Score 15.06 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000852_2.0   51 NELQCRFPRRLVVLGF                                  
                     NE Q  +PR L++L +                                  
                     NETQVILPRTLLLLPY                                  
KK950321.1:subs-3354 agacgaccaaccccct                                  
                     aacatttcgcttttca                                  
                     cgtgcagtacctatcc                                  


//
>KK950321.1:subseq(739531,5080).pep
NETQVILPRTLLLLPY
//
>KK950321.1:subseq(739531,5080).[3354:3305].sp
AACGAGACTCAGGTCATACTGCCTAGAACCCTCCTTCTACTTCCCTAC
//
KK950321.1:subseq(739531,5080)	GeneWise	match	3354	3307	15.06	-	.	KK950321.1:subseq(739531,5080)-genewise-prediction-1
KK950321.1:subseq(739531,5080)	GeneWise	cds	3354	3307	0.00	-	0	KK950321.1:subseq(739531,5080)-genewise-prediction-1
//
