Protein prediction Predicted by: exonerate Blastx evalue: 1e-64 Query protein: gi|379056379|ref|NP_001243807.1| selenoprotein P precursor [Cricetulus griseus] Positions on query: 1-383 Query length: 383 Target name: KL202419.1:subseq_7943933,30164_ Positions on target: 18609-18811,17717-17929,15030-15147,12299-12901 Strand: - Has a Redox Box! Query MWRSLGLALALCLLPYGGTESQGQSPACKQPPAWSIGDQNPMLNSEGTVTVVALLQASUYLCLLQASR < ||/ |||||||||||||||||| ||| || |||||| |||||||| | |||||||||||||||||||| < Target MWKGLGLALALCLLPYGGTESQDQSPVCKPPPAWSIKDQNPMLNSMGRVTVVALLQASUYLCLLQASR atagcgcgcgctccctggagacgcacgtacccgtaaagcacacatagagagggcccgattctcccgta tgagtgtctctgttcaggcagaaagctgaccccggtaaaacttactggtcttcttacggatgttaccg ggacggtcgtcttcctagagcacgctttgatacgcaatataggccgtagcgttttgccacgcggggc * Query ---Intron---> LEDLRLKLENQGYSNISYIIVNHQGSPSQLKHTHLKNHVSDQIAVYRQEEHQTDVW 679bp > |/|||/||/ /||||/|||/||||| ||||/ |||| ||| | || |||/||||| Target LDDLRIKLDKEGYSNVSYIVVNHQGISSQLKYIHLKNKVSDHIPVYPQEENQTDVW tggccaacgaggttagttaggaccgattctataccaaagtgcacgtccggacaggt taatgtataaagacatcatttaaagtccataatataaatcaatctacaaaaacatg agctgaaaacaagtttttctttttaactcaaactttatggacttttcaaaacaatcg Query TLLNGNKDDFLIYDR <---Intron---> CGRLVYHLGLPYSFLTFPYVEEAIKIAYCEKKCRNCSFT |||||||||||/||| < 2569bp > ||||||||||||||||||||||||||||| || ||/| Target TLLNGNKDDFLVYDR CGRLVYHLGLPYSFLTFPYVEEAIKIAYCGNKCGICSYT actagaaggtcgtga tgccgtccgtctttcatctggggaaagttgaatgattta cttagaaaatttaag gggttaatgtcacttctcataactatcaggaaggtgcac tcatacatcctatc atcttgttttgatttatccttaactgctctacgtatctcg Query <---Intron---> SLEDEDFCKNVSSATKGKTAEPSEAHHHHKHHHKHGHGLLGSREELSENQQPGA < 2128bp > /|/|||||/|||| /|| | / |/|/|||||||| ||| /|||||||| Target TLKDEDFCQNVSSDPEGKATETPKPHYHYKHHHKHGHQHLGS-SKLSENQQPGD acagggttcagttgcggagagacacctctacccacgccccga-aactgacccgg ctaaaatgaatccacagaccaccacaaaaaaaaaagaaatgg-gatcaaaacga cgatacctatacattgtactgtagatcttgctcatgtgttgc-cgtagtgaaat Query ADAEAPLPPVGLHHHHKHKGKHRQGHLESUDMQASEGLQLSLAQRKLCRKGCINQLLCKLSQESGTTTSS | |/||||||| ||| |||/| ||||||||||||| |||||||||||||/|||| ||| Target PDTPTHTHPLGLHHHHKLVS---QGHSESUEMAGSEGLQLSLAQRKLURKGCINQLLCKLSKESGTATSS cgacacacctgcccccacga---cgctgatgaggaggtcctcgcaactcagtaactctattagtgagaaa cacccacactgtaaaaattg---agacaggatcggagtatctcagatggaggtaattgatcaacgcccgg atttaccttacttcctgtgt---gtctgcaagagtataatataaggcaagacacaagtggtggtcatttc * * Query CCCHCRHLIFEKSGSAITUQCAENLPSLCSUQGLFAEEKVIESCQCRSPPAAUQSQPLDPTGASPNUSUD |||||||||||/|||||||||||/|||||||||||||||||||||||||||||||| | || ||||||/ Target CCCHCRHLIFERSGSAITUQCAESLPSLCSUQGLFAEEKVIESCQCRSPPAAUQSQQLSPTEVSPNUSUN tttctcccatgatgtgaatctggacctttatcgctgggagagttctctccggtcacccacaggacatata gggaggatttagcgcctcgagcagtcctgggagttcaaattacgaggcccccgagaatgccatgcaggga tccttaccataaagtaccagtcaccatatcagagtgggagtattgcaaaatcaacgagccaaccccacat * * * * * Query NKIKKUKURSN |/ |||||||| Target NRTKKUKURSN aaaaatatcta agcaagaggca tgcagaaatac * * Protein prediction Predicted by: exonerate Blastx evalue: 1e-64 Query protein: gi|379056379|ref|NP_001243807.1| selenoprotein P precursor [Cricetulus griseus] Positions on query: 1-383 Query length: 383 Target name: KL202419.1:subseq_7943933,30164_ Positions on target: 18609-18811,17717-17929,15030-15147,12299-12901 Strand: - Has a Redox Box! Query MWRSLGLALALCLLPYGGTESQGQSPACKQPPAWSIGDQNPMLNSEGTVTVVALLQASUYLCLLQASR < ||/ |||||||||||||||||| ||| || |||||| |||||||| | |||||||||||||||||||| < Target MWKGLGLALALCLLPYGGTESQDQSPVCKPPPAWSIKDQNPMLNSMGRVTVVALLQASUYLCLLQASR atagcgcgcgctccctggagacgcacgtacccgtaaagcacacatagagagggcccgattctcccgta tgagtgtctctgttcaggcagaaagctgaccccggtaaaacttactggtcttcttacggatgttaccg ggacggtcgtcttcctagagcacgctttgatacgcaatataggccgtagcgttttgccacgcggggc * Query ---Intron---> LEDLRLKLENQGYSNISYIIVNHQGSPSQLKHTHLKNHVSDQIAVYRQEEHQTDVW 679bp > |/|||/||/ /||||/|||/||||| ||||/ |||| ||| | || |||/||||| Target LDDLRIKLDKEGYSNVSYIVVNHQGISSQLKYIHLKNKVSDHIPVYPQEENQTDVW tggccaacgaggttagttaggaccgattctataccaaagtgcacgtccggacaggt taatgtataaagacatcatttaaagtccataatataaatcaatctacaaaaacatg agctgaaaacaagtttttctttttaactcaaactttatggacttttcaaaacaatcg Query TLLNGNKDDFLIYDR <---Intron---> CGRLVYHLGLPYSFLTFPYVEEAIKIAYCEKKCRNCSFT |||||||||||/||| < 2569bp > ||||||||||||||||||||||||||||| || ||/| Target TLLNGNKDDFLVYDR CGRLVYHLGLPYSFLTFPYVEEAIKIAYCGNKCGICSYT actagaaggtcgtga tgccgtccgtctttcatctggggaaagttgaatgattta cttagaaaatttaag gggttaatgtcacttctcataactatcaggaaggtgcac tcatacatcctatc atcttgttttgatttatccttaactgctctacgtatctcg Query <---Intron---> SLEDEDFCKNVSSATKGKTAEPSEAHHHHKHHHKHGHGLLGSREELSENQQPGA < 2128bp > /|/|||||/|||| /|| | / |/|/|||||||| ||| /|||||||| Target TLKDEDFCQNVSSDPEGKATETPKPHYHYKHHHKHGHQHLGS-SKLSENQQPGD acagggttcagttgcggagagacacctctacccacgccccga-aactgacccgg ctaaaatgaatccacagaccaccacaaaaaaaaaagaaatgg-gatcaaaacga cgatacctatacattgtactgtagatcttgctcatgtgttgc-cgtagtgaaat Query ADAEAPLPPVGLHHHHKHKGKHRQGHLESUDMQASEGLQLSLAQRKLCRKGCINQLLCKLSQESGTTTSS | |/||||||| ||| |||/| ||||||||||||| |||||||||||||/|||| ||| Target PDTPTHTHPLGLHHHHKLVS---QGHSESUEMAGSEGLQLSLAQRKLURKGCINQLLCKLSKESGTATSS cgacacacctgcccccacga---cgctgatgaggaggtcctcgcaactcagtaactctattagtgagaaa cacccacactgtaaaaattg---agacaggatcggagtatctcagatggaggtaattgatcaacgcccgg atttaccttacttcctgtgt---gtctgcaagagtataatataaggcaagacacaagtggtggtcatttc * * Query CCCHCRHLIFEKSGSAITUQCAENLPSLCSUQGLFAEEKVIESCQCRSPPAAUQSQPLDPTGASPNUSUD |||||||||||/|||||||||||/|||||||||||||||||||||||||||||||| | || ||||||/ Target CCCHCRHLIFERSGSAITUQCAESLPSLCSUQGLFAEEKVIESCQCRSPPAAUQSQQLSPTEVSPNUSUN tttctcccatgatgtgaatctggacctttatcgctgggagagttctctccggtcacccacaggacatata gggaggatttagcgcctcgagcagtcctgggagttcaaattacgaggcccccgagaatgccatgcaggga tccttaccataaagtaccagtcaccatatcagagtgggagtattgcaaaatcaacgagccaaccccacat * * * * * Query NKIKKUKURSN |/ |||||||| Target NRTKKUKURSN aaaaatatcta agcaagaggca tgcagaaatac * *