
genewise output
Score 19.97 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000129_2.0  258 HIGSLNWGYR                                        
                     H+ +L+WGY+                                        
                     HVNNLHWGYK                                        
KE993833.1:subs67804 cgaacctgta                                        
                     ataataggaa                                        
                     tactgcgata                                        


//
>KE993833.1:subseq(7174,100104).pep
HVNNLHWGYK
//
>KE993833.1:subseq(7174,100104).[67804:67833].sp
CATGTAAACAATCTGCACTGGGGATATAAA
//
KE993833.1:subseq(7174,100104)	GeneWise	match	67804	67833	19.97	+	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	67804	67833	0.00	+	0	KE993833.1:subseq(7174,100104)-genewise-prediction-1
//

genewise output
Score 672.55 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000129_2.0   48 TSTATADSRALLQAYIDGHSVVIFSRSTCTRCTE                
                     T  A   +R  +Q  ++   VV+FS+S C  C +                
                     TGEAREAARTRVQGLVERVPVVLFSKSFCPFCEK                
KE993833.1:sub-71106 agggcgggcacgcgcggcgcggttaaattcttga                
                     cgacgaccgcgtagttagtcttttgagtgctgaa                
                     gaaagggcaggtattggacagcgccgcctgccag                


SPP00000129_2.0   82                        VKKLFKSLCVPYFVLELDQT       
                                            VK LF  L V Y  LELD         
                                            VKGLFTELKVSYEALELDLI       
KE993833.1:sub-71004 GTGAGAG  Intron 1   CAGgagctagcagttggcgcgca       
                     <0-----[71004:67438]-0>tagttcatatcaactatatt       
                                            gggccaaggctcacgggcca       


SPP00000129_2.0  102                           DGRALEGTLSELAAETDLPVVFV 
                                               DG  ++  L E+  +  +P VFV 
                               E:D[gac]        DGPLIQEVLLEMTGQKTVPNVFV 
KE993833.1:sub-67377 GGTACAAG  Intron 2   CAGACggccacggccgaagcaagcagtg 
                      <1-----[67376:65570]-1>  agcttaatttatcgaactcattt 
                                               tgtccggtgggggagaagccgtc 


SPP00000129_2.0  126 KQRKIGGHGPTLK                       AYQEGRLQKLLKM 
                      +  +GG   T++                       AYQ GRLQ+LL   
                     NKTHVGGCDKTMQ                       AYQSGRLQQLLAT 
KE993833.1:sub-65498 aaacgggtgaaacGTAAGGC  Intron 3   CAGgtcagccccccga 
                     aacatgggaacta<0-----[65459:64464]-0>caagggtaattcc 
                     cgtcgactcgggg                       gtgctacgagggc 


SPP00000129_2.0  152 N-GPEDLP---------KSYDYDLIIIGGGSGGLAAAK            
                     +  P   P          SY+YDLI+IGGGSGGLAA+K            
                     STAPSPAPPVEDTDAVHHSYEYDLIVIGGGSGGLAASK            
KE993833.1:sub-64424 tagctcgccgggagggccttgtgcagagggtggcggta            
                     ccccccccctaacactaacaaaattttgggcggtccca            
                     cgccacaagggcgcagccccaccctccggccggctccg            


SPP00000129_2.0  180                        EAAQYGKKVMVLDFVTPTPLGTRW   
                                            EAA+ GKKVMVLDFV PTPLGT W   
                                            EAAKLGKKVMVLDFVQPTPLGTSW   
KE993833.1:sub-64310 GCAAGAG  Intron 4   CAGgggacgaagagcgtgccaccgatt   
                     <0-----[64310:59963]-0>accatgaattttattaccctgccg   
                                            ggcgccggggggctgggcggcaag   


SPP00000129_2.0  204                           LGGTCVNVGCIPKKLMHQAALLG 
                                               LGGTCVNVGCIPKKLMHQAALLG 
                               G:G[ggc]        LGGTCVNVGCIPKKLMHQAALLG 
KE993833.1:sub-59890 GGTGAGCC  Intron 5   CAGGCcggatgaggtacaacaccggtcg 
                      <1-----[59889:59599]-1>  tggcgtatggtcaattaaccttg 
                                               gtcgtgcgcccgggggcggtgac 


SPP00000129_2.0  228 QALQDSRNYGWKVEET                          KHDWDRM 
                      AL DSR +GW+ ++                            H+W+ M 
                     HALSDSRKFGWEYDQQ          V:V[gtg]        THNWNTM 
KE993833.1:sub-59527 cgctgtcatgtgtgccGGTGCGTT  Intron 6   CAGTGacataaa 
                     actcacgatggaaaaa <1-----[59478:59049]-1>  caagact 
                     cgcccgcgtcggccga                          tccgccg 


SPP00000129_2.0  252 IEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIK          
                      EA+QN+IGSLNWGYRVALR+  V Y NA+G F   H IK          
                     KEAIQNYIGSLNWGYRVALRDHTVSYVNAFGTFTDAHTIK          
KE993833.1:sub-59025 aggacatagtcatgtcggccgcagatgagtgataggcaaa          
                     aactaaatgctaggagtctgaactgatactgctcacacta          
                     gaccgcctcgccgcccgagccttgccccacacccccctcg          


SPP00000129_2.0  292                        ATNNKGKEKIYSAERFLIATGERPRY 
                                            ATN +GKE  ++AE F++A GERPRY 
                                            ATNKRGKETQHTAETFILAMGERPRY 
KE993833.1:sub-58905 GTACGCA  Intron 7   TAGgaaacgagaccaggatacgaggccct 
                     <0-----[58905:58387]-0>ccaaggaacaaccactttctgagcga 
                                            cccgccgacgcacgaccccggaaggc 


SPP00000129_2.0  318 LGIPGDKEYCIS                          DDLFSLPYCPG 
                     LGIPGDKE+CI+                          DD+FSLPYCPG 
                     LGIPGDKEFCIT           S:S[agc]       DDVFSLPYCPG 
KE993833.1:sub-58308 cgacggagttaaAGGTGTGGC  Intron 8   CAGCgggttccttcg 
                     tgtcgaaatgtc  <2-----[58270:53176]-2> aattctcagcg 
                     gccaacggtccc                          ccccgagcctc 


SPP00000129_2.0  342 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 
                     KTLVVGASYVALECAGFLAG+GLDVTVMVRSILLRGFDQ MA   G++M 
                     KTLVVGASYVALECAGFLAGLGLDVTVMVRSILLRGFDQQMAELAGDYM 
KE993833.1:sub-53141 aacggggatggcgtggttggcgcggagagctacccgtgccaggtgggta 
                     actttgcgatctagcgttcgtgtatctttgctttggtaaatcatcgaat 
                     gcgggccccggggccccggggggcgtgggcccggaattgggcagcaccg 


SPP00000129_2.0  391 EEHGIKFIRQFVPIK                       VEQIEAGTPGR 
                     E+HG+KFIRQFVP K                       VEQ+EAGTPGR 
                     EKHGVKFIRQFVPTK                       VEQLEAGTPGR 
KE993833.1:sub-52994 gacggatacctgcaaGTAGGGC  Intron 9   TAGggccgggacgc 
                     aaagtattgattcca<0-----[52949:52139]-0>taatacgccgg 
                     gacgcgcccgcgccg                       tgatgcccccc 


SPP00000129_2.0  417 LRVVAQSTNSEEIIEGEYNT                       VMLAIG 
                     L+V A++T   E+ EGE+NT                       V++A+G 
                     LKVHAKATEGSELYEGEFNT                       VLIAVG 
KE993833.1:sub-52105 cagcgagaggtgctgggtaaGTGAGTC  Intron 10  TAGgcaggg 
                     tatacaccagcataagatac<0-----[52045:51853]-0>tttctg 
                     cgctggcggcgggcgcgccg                       ggccgg 


SPP00000129_2.0  443 RDACTRKIGLETVGVKINE                          TGKI 
                     RDACT  IGL+ VGVK++E                          TGK+ 
                     RDACTSNIGLDVVGVKVDE           K:R[agg]       TGKV 
KE993833.1:sub-51834 aggtataagcgggggagggAGGTAGCCC  Intron 11  CAGGagag 
                     gacgccatgtattgtataa  <2-----[51775:51527]-2> cgat 
                     acccgcccggcgtggggtg                          gcgg 


SPP00000129_2.0  467 PVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVK  
                     PV D EQTNVP++YAIGDIL+ K+ELTP+AIQAGRLLA RLY G T K  
                     PVNDVEQTNVPHVYAIGDILQGKLELTPIAIQAGRLLAHRLYGGGTTK  
KE993833.1:sub-51513 cgagggcaagccgtgaggaccgacgcacagacggcccgccctgggaaa  
                     ctaataacatcatactgattagatatcctctacggttcagtagggcca  
                     ggccggggcggctcaccccggcgggcgccccgtcgggccgccgccccg  


SPP00000129_2.0  515                        CDYENVPTTVFTPLEYGACGLSEEKA 
                                            CDY NV TTVFTPLEYG CGLSEE+A 
                                            CDYVNVCTTVFTPLEYGCCGLSEERA 
KE993833.1:sub-51369 GTACCCA  Intron 12  CAGtgtgagtaagtaccgtgttgctggag 
                     <0-----[51369:50495]-0>gaatatgccttcctaaggggtcaagc 
                                            tctgcgcccgcgccgccccccagggc 


SPP00000129_2.0  541 VEKFGEENIE                       VYHSYFWPLEWTIPSR 
                      E +GE+NIE                       V+HS FWPLEWT+    
                     FELLGEDNIE                       VFHSNFWPLEWTVAGG 
KE993833.1:sub-50416 tgtcgggaagGTGACAC  Intron 13  TAGgtcaattccgtagggg 
                     tattgaaata<0-----[50386:50105]-0>ttagatgctagctcgg 
                     caggaacccg                       ccccccgggggtgctt 


SPP00000129_2.0  567 DNNKCYAKIICNTKDNER                       --VVGFHV 
                     DNN CYAKI+CN  D  R                         VVGFHV 
                     DNNSCYAKILCNKADKAR                       DRVVGFHV 
KE993833.1:sub-50056 gaaattgaactaaggagcGTGCCCA  Intron 14  CAGgcgggtcg 
                     aaaggacattgaacaacg<0-----[50002:49677]-0>agttgtat 
                     tccccccgcctcgtcgat                       cggggccg 


SPP00000129_2.0  591 LGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAE             
                     LGPNAGE+TQG+  A+KCGLTK QLD TIGIHP CAE             
                     LGPNAGEITQGYGVAMKCGLTKAQLDDTIGIHPTCAE             
KE993833.1:sub-49652 cgcagggaacgtgggaatgcaagccggaagaccatgg             
                     tgcacgatcagagtctaggtcacataactgtaccgca             
                     tcccctgtcgccttcggcccagcggcccccccgcccg             


SPP00000129_2.0  628                        VFTTLSVTKRSGASILQAGC       
                                            +FT L+VTKRSGA I Q GC       
                                            IFTMLAVTKRSGADIKQTGC       
KE993833.1:sub-49541 GTCAGCC  Intron 15  CAGataacggaactgggaacagt       
                     <0-----[49541:48815]-0>ttcttctcagcgcataacgg       
                                            cccgcggcgcggcctggccc       


//
Making a D in phase 1 intron
Making a G in phase 1 intron
Making a V in phase 1 intron
Making a S in phase 2 intron
Making a R in phase 2 intron
>KE993833.1:subseq(7174,100104).pep
TGEAREAARTRVQGLVERVPVVLFSKSFCPFCEKVKGLFTELKVSYEALELDLIDDGPLI
QEVLLEMTGQKTVPNVFVNKTHVGGCDKTMQAYQSGRLQQLLATSTAPSPAPPVEDTDAV
HHSYEYDLIVIGGGSGGLAASKEAAKLGKKVMVLDFVQPTPLGTSWGLGGTCVNVGCIPK
KLMHQAALLGHALSDSRKFGWEYDQQVTHNWNTMKEAIQNYIGSLNWGYRVALRDHTVSY
VNAFGTFTDAHTIKATNKRGKETQHTAETFILAMGERPRYLGIPGDKEFCITSDDVFSLP
YCPGKTLVVGASYVALECAGFLAGLGLDVTVMVRSILLRGFDQQMAELAGDYMEKHGVKF
IRQFVPTKVEQLEAGTPGRLKVHAKATEGSELYEGEFNTVLIAVGRDACTSNIGLDVVGV
KVDERTGKVPVNDVEQTNVPHVYAIGDILQGKLELTPIAIQAGRLLAHRLYGGGTTKCDY
VNVCTTVFTPLEYGCCGLSEERAFELLGEDNIEVFHSNFWPLEWTVAGGDNNSCYAKILC
NKADKARDRVVGFHVLGPNAGEITQGYGVAMKCGLTKAQLDDTIGIHPTCAEIFTMLAVT
KRSGADIKQTGC
//
>KE993833.1:subseq(7174,100104).[71106:48753].sp
ACGGGAGAAGCACGGGAGGCGGCCCGAACGCGGGTTCAAGGTCTTGTGGAGCGAGTCCCA
GTGGTCTTGTTCAGCAAGAGCTTCTGTCCGTTCTGCGAAAAGGTGAAGGGGCTCTTCACA
GAACTGAAGGTCTCTTACGAAGCCCTGGAGCTGGACCTCATAGACGATGGGCCTCTCATC
CAGGAGGTTCTGCTGGAGATGACGGGACAGAAAACAGTGCCCAACGTGTTTGTCAACAAG
ACTCACGTGGGAGGCTGTGACAAGACGATGCAGGCGTATCAGAGCGGTCGACTCCAGCAA
CTGCTGGCGACCTCCACGGCCCCCTCACCCGCACCACCGGTGGAGGACACGGACGCAGTG
CACCACTCCTACGAATACGACCTCATTGTCATCGGGGGGGGCTCCGGGGGGCTCGCTGCC
TCCAAGGAGGCGGCCAAGCTCGGCAAGAAGGTGATGGTGCTGGACTTTGTGCAGCCGACC
CCGCTGGGCACATCATGGGGCCTGGGTGGCACGTGTGTGAACGTGGGCTGCATCCCGAAG
AAGCTGATGCACCAGGCGGCTTTGCTAGGCCACGCGCTCTCCGACTCGCGCAAGTTTGGC
TGGGAGTACGACCAGCAAGTGACTCACAACTGGAACACCATGAAGGAAGCCATCCAGAAC
TACATTGGCTCGCTCAACTGGGGCTACCGCGTGGCACTGCGCGACCATACTGTGAGCTAC
GTCAACGCATTCGGAACCTTCACCGACGCCCACACTATCAAGGCCACCAACAAGCGCGGC
AAGGAAACCCAGCACACAGCCGAGACATTCATCCTCGCCATGGGGGAACGACCGCGGTAC
CTGGGCATCCCAGGAGACAAGGAGTTTTGCATCACCAGCGACGACGTCTTCTCGCTACCG
TACTGCCCTGGCAAGACCCTGGTGGTGGGCGCCAGCTACGTGGCGCTGGAGTGCGCCGGC
TTCTTGGCGGGGCTGGGGCTGGACGTGACTGTGATGGTGCGCTCCATCCTGCTGCGAGGA
TTTGATCAGCAGATGGCCGAATTGGCCGGAGACTACATGGAGAAACACGGGGTCAAGTTC
ATCCGCCAGTTCGTGCCCACCAAGGTTGAGCAACTTGAGGCCGGCACCCCCGGCCGCCTC
AAGGTCCATGCGAAGGCCACGGAGGGCTCGGAGCTGTACGAGGGCGAGTTCAACACGGTG
CTGATCGCCGTGGGGAGAGACGCCTGCACGTCCAACATCGGGCTGGACGTGGTTGGGGTG
AAGGTGGATGAGAGGACGGGCAAGGTGCCGGTGAACGACGTGGAGCAGACGAACGTGCCG
CACGTTTACGCAATCGGCGACATCCTGCAGGGCAAGCTGGAGCTCACGCCCATCGCCATC
CAGGCTGGCCGGCTGCTGGCCCACCGGCTCTACGGGGGCGGCACCACCAAGTGTGACTAT
GTGAACGTGTGCACCACCGTGTTCACGCCCCTCGAGTACGGCTGCTGCGGCCTCTCAGAG
GAGAGGGCCTTCGAATTGCTGGGAGAAGACAACATCGAGGTCTTCCACAGCAACTTCTGG
CCGCTGGAGTGGACTGTGGCCGGTGGTGATAACAACAGCTGCTACGCCAAGATCCTCTGT
AACAAGGCTGACAAGGCACGTGACCGGGTGGTGGGGTTCCACGTGCTTGGCCCCAACGCC
GGTGAGATTACCCAGGGCTACGGTGTTGCCATGAAGTGCGGCCTCACAAAGGCCCAGCTG
GACGACACCATCGGCATCCACCCGACCTGCGCCGAGATCTTCACCATGCTCGCGGTGACC
AAGCGCTCGGGGGCCGACATTAAGCAGACCGGCTGC
//
KE993833.1:subseq(7174,100104)	GeneWise	match	71106	48755	681.54	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	71106	71005	0.00	-	0	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	71004	67438	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	67437	67377	0.00	-	0	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	67376	65570	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	65569	65460	0.00	-	2	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	65459	64464	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	64463	64311	0.00	-	0	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	64310	59963	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	59962	59890	0.00	-	0	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	59889	59599	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	59598	59479	0.00	-	2	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	59478	59049	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	59048	58906	0.00	-	2	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	58905	58387	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	58386	58271	0.00	-	0	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	58270	53176	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	53175	52950	0.00	-	1	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	52949	52139	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	52138	52046	0.00	-	0	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	52045	51853	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	51852	51776	0.00	-	0	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	51775	51527	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	51526	51370	0.00	-	1	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	51369	50495	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	50494	50387	0.00	-	0	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	50386	50105	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	50104	50003	0.00	-	0	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	50002	49677	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	49676	49542	0.00	-	0	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	intron	49541	48815	0.00	-	.	KE993833.1:subseq(7174,100104)-genewise-prediction-1
KE993833.1:subseq(7174,100104)	GeneWise	cds	48814	48755	0.00	-	0	KE993833.1:subseq(7174,100104)-genewise-prediction-1
//
