
genewise output
Score 133.06 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000109_2.0   60 EPRTFKAKELWEKNGAVIMAVRRPGCFLCRE                   
                     E R F+A ELW   GAV+MAVRRPG FLCRE                   
                     ESRKFRAGELWRDKGAVVMAVRRPGXFLCRE                   
KE993794.1:subs50000 gtcatcgggctcgaggggaggcccgttttag                   
                     acgatgcgatggaagctttctggcggttgga                   
                     ggcgctggggggtatcgggcggtcaatgcag                   


SPP00000109_2.0   91                        EAADLSSLKSMLDQLGVPLYAVVKEH 
                                            EA+ LS+L  +L +  VPL AVV E  
                                            EASLLSALAPFLSEHDVPLAAVVHED 
KE993794.1:subs50093 GTACACG  Intron 1   CAGggacctgcgctctgcggccggggcgg 
                     <0-----[50093:51015]-0>acgttcctccttcaaatctccttaaa 
                                            ggccctagcgccggccgagatggcgc 


SPP00000109_2.0  117 IRTEVKDFQPYFKGEIFLDEK                       KKFYG 
                     + TE+KDF+P+F+G+++LD++                       ++FYG 
                     VGTEIKDFRPFFQGQVYLDQE                       RRFYG 
KE993794.1:subs51094 ggagaagtccttcgcgtcgcgGTTTGGC  Intron 2   CAGcattg 
                     tgcataatgcttagatataaa<0-----[51157:51880]-0>ggtag 
                     gacgcgccgaccgcgccccag                       ggcta 


SPP00000109_2.0  143 PQRRKMMFMGFIRLGVWYNFFRAWNGGFSGNLEGEGFILGGVFVVGSGK 
                     P+ R M+++GF+RL VW NF+RA  GGF GN+ GEG ILGGV+V+G+G  
                     PKERWMFWLGFVRLSVWRNFMRAREGGF!GNMLGEGRILGGVYVIGAGD 
KE993794.1:subs51896 cagctattcgtgccagtcatacgagggt4gaacgggcacgggtgagggg 
                     caaggttgtgttgtgtggattgcgaggt gattgaggttggtattgcga 
                     cgacggcggccgcgtggtccgcgggccc gcggcggccgtacccttcac 


SPP00000109_2.0  192 Q                       GILLEHREKEFGDKVNLLSVLEAAK 
                     Q                       G+LL+H+E++FGD VN  +V++A + 
                     Q                       GVLLDHKERQFGDIVNKTAVMDAVR 
KE993794.1:subs52044 cGTGAGCT  Intron 3   TAGggtcgcagcctggagaaaggagggc 
                     a<0-----[52047:52750]-0>gtttaaaagatgattaaccttactg 
                     g                       ccggttggtgtaccccggtggtggc 


SPP00000109_2.0  218 MIKP                                              
                      I+P                                              
                     KIQP                                              
KE993794.1:subs52826 aacc                                              
                     atac                                              
                     acgc                                              


//
>KE993794.1:subseq(11068,100101).pep
ESRKFRAGELWRDKGAVVMAVRRPGXFLCREEASLLSALAPFLSEHDVPLAAVVHEDVGT
EIKDFRPFFQGQVYLDQERRFYGPKERWMFWLGFVRLSVWRNFMRAREGGFXGNMLGEGR
ILGGVYVIGAGDQGVLLDHKERQFGDIVNKTAVMDAVRKIQP
//
>KE993794.1:subseq(11068,100101).[50000:51979].sp
GAGTCGCGCAAGTTCCGTGCGGGGGAGCTGTGGCGGGATAAAGGTGCCGTGGTGATGGCC
GTGCGGCGTCCCGGATGATTTTTGTGCAGAGAGGAGGCGAGCCTCCTCTCTGCACTGGCC
CCGTTCCTCTCGGAGCACGACGTGCCACTGGCAGCTGTGGTGCACGAGGACGTGGGAACC
GAGATCAAGGACTTCCGGCCATTCTTCCAGGGCCAGGTCTACCTCGACCAAGAGCGGAGG
TTCTATGGACCCAAGGAACGCTGGATGTTCTGGCTGGGCTTCGTGCGCCTGAGTGTGTGG
CGTAACTTCATGCGCGCGAGGGAGGGCGGCTTC
>KE993794.1:subseq(11068,100101).[51984:52837].sp
GGGAACATGCTGGGCGAGGGGCGCATCCTGGGTGGAGTCTACGTCATTGGTGCCGGAGAC
CAGGGCGTCTTGCTGGATCATAAGGAGCGTCAGTTTGGAGACATCGTCAACAAGACGGCT
GTGATGGATGCGGTGCGCAAAATCCAGCCC
//
KE993794.1:subseq(11068,100101)	GeneWise	match	50000	51979	79.69	+	.	KE993794.1:subseq(11068,100101)-genewise-prediction-1
KE993794.1:subseq(11068,100101)	GeneWise	cds	50000	50092	0.00	+	0	KE993794.1:subseq(11068,100101)-genewise-prediction-1
KE993794.1:subseq(11068,100101)	GeneWise	intron	50093	51015	0.00	+	.	KE993794.1:subseq(11068,100101)-genewise-prediction-1
KE993794.1:subseq(11068,100101)	GeneWise	cds	51016	51156	0.00	+	0	KE993794.1:subseq(11068,100101)-genewise-prediction-1
KE993794.1:subseq(11068,100101)	GeneWise	intron	51157	51880	0.00	+	.	KE993794.1:subseq(11068,100101)-genewise-prediction-1
KE993794.1:subseq(11068,100101)	GeneWise	cds	51881	51979	0.00	+	0	KE993794.1:subseq(11068,100101)-genewise-prediction-1
KE993794.1:subseq(11068,100101)	GeneWise	match	51984	52837	53.37	+	.	KE993794.1:subseq(11068,100101)-genewise-prediction-2
KE993794.1:subseq(11068,100101)	GeneWise	cds	51984	52046	0.00	+	0	KE993794.1:subseq(11068,100101)-genewise-prediction-2
KE993794.1:subseq(11068,100101)	GeneWise	intron	52047	52750	0.00	+	.	KE993794.1:subseq(11068,100101)-genewise-prediction-2
KE993794.1:subseq(11068,100101)	GeneWise	cds	52751	52837	0.00	+	0	KE993794.1:subseq(11068,100101)-genewise-prediction-2
//

genewise output
Score 22.34 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000109_2.0   53 DLKTLEKEPRTFKAKELWEKNGAVIMAVRRP                   
                     D+  L ++ R  +A+E W + G    AVR P                   
                     DVAGLRRDERATRAREQWARGGWGTAAVRPP                   
KE993794.1:sub-28017 ggggtccggcgaagagctgcggtgagggccc                   
                     atcgtggaagccgcgaagcgggggccctgcc                   
                     ccccgggcgaggggggagaagcgcatcctct                   


//
>KE993794.1:subseq(11068,100101).pep
DVAGLRRDERATRAREQWARGGWGTAAVRPP
//
>KE993794.1:subseq(11068,100101).[28017:27923].sp
GACGTCGCCGGCTTGCGGCGGGACGAGCGAGCGACGAGGGCGAGGGAGCAATGGGCACGA
GGGGGCTGGGGCACAGCTGCCGTCCGTCCCCCT
//
KE993794.1:subseq(11068,100101)	GeneWise	match	28017	27925	22.34	-	.	KE993794.1:subseq(11068,100101)-genewise-prediction-1
KE993794.1:subseq(11068,100101)	GeneWise	cds	28017	27925	0.00	-	0	KE993794.1:subseq(11068,100101)-genewise-prediction-1
//
