
genewise output
Score 15.15 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00002937_2.0   10 SLESINSRLQLVMKSGKYVLGY                            
                     S  S  +R + +  +G+Y LGY                            
                     SSSSALTRSERLSTTGRYPLGY                            
KE994260.1:subs51991 ttaagtacagccaaagctccgt                            
                     ccggctcggagtgccggactga                            
                     atctaggctaggcaccccccat                            


//
>KE994260.1:subseq(135439,100146).pep
SSSSALTRSERLSTTGRYPLGY
//
>KE994260.1:subseq(135439,100146).[51991:52056].sp
TCATCTAGCAGTGCATTGACGCGCAGTGAACGGCTGAGCACAACCGGCCGCTACCCCCTC
GGATAT
//
KE994260.1:subseq(135439,100146)	GeneWise	match	51991	52056	15.15	+	.	KE994260.1:subseq(135439,100146)-genewise-prediction-1
KE994260.1:subseq(135439,100146)	GeneWise	cds	51991	52056	0.00	+	0	KE994260.1:subseq(135439,100146)-genewise-prediction-1
//

genewise output
Score 219.52 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00002937_2.0    8 KKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPAL  
                     KK++ESINSRLQLVMKSGKY LGY+QTLKMIRQGKAKLV+LANNCPAL  
                     KKAIESINSRLQLVMKSGKYCLGYRQTLKMIRQGKAKLVLLANNCPAL  
KE994260.1:sub-50146 aagagtaatccccgaaagattcgtacacaaaccgagacgccgaatcgc  
                     aactactacgtatttaggaagtgagactattgagacattttcaagcct  
                     agccgcccgacgggggtcaccgacaggcggcgacgcggggcccccgag  


SPP00002937_2.0   56                           KSEIEYYAMLAKTGVHHYSGNNI 
                                               KSEIEYYAMLAKTGVHHYSGNNI 
                                R:R[agg]       KSEIEYYAMLAKTGVHHYSGNNI 
KE994260.1:sub-50002 AGGTGTGTG  Intron 1   CAGGatgagttgacgaaggcctagaaa 
                       <2-----[50000:49296]-2> acataaacttcacgtaaaggaat 
                                               gcgtgcccggcggcccccccccc 


SPP00002937_2.0   80 ELGTACGKYYRVCTLAIIDP                          DSD 
                     E+GTACGKYYRVCTLAIIDP                          DSD 
                     EMGTACGKYYRVCTLAIIDP          G:G[ggt]        DSD 
KE994260.1:sub-49225 gagagtgattcgtacgaagcGGTGAGTA  Intron 2   CAGGTgtg 
                     atgccggaaagtgctcttac <1-----[49164:46614]-1>  aca 
                     ggcggccacccgtgcccccc                          cgc 


SPP00002937_2.0  104 IIRSMPEQ                                          
                     IIRSMPEQ                                          
                     IIRSMPEQ                                          
KE994260.1:sub-46602 aactacgc                                          
                     ttgctcaa                                          
                     ccccgggg                                          


//
Making a R in phase 2 intron
Making a G in phase 1 intron
>KE994260.1:subseq(135439,100146).pep
KKAIESINSRLQLVMKSGKYCLGYRQTLKMIRQGKAKLVLLANNCPALRKSEIEYYAMLA
KTGVHHYSGNNIEMGTACGKYYRVCTLAIIDPGDSDIIRSMPEQ
//
>KE994260.1:subseq(135439,100146).[50146:46577].sp
AAAAAGGCCATCGAGTCCATCAACTCGCGACTCCAGCTGGTGATGAAGAGTGGCAAATAC
TGCCTGGGATACAGACAGACGCTCAAGATGATCCGGCAAGGCAAGGCCAAGCTGGTGCTG
CTCGCCAACAACTGCCCGGCACTGAGGAAGTCCGAGATTGAGTACTACGCCATGCTGGCC
AAGACGGGCGTCCACCACTACAGCGGCAACAACATCGAGATGGGCACGGCGTGCGGCAAA
TACTACCGCGTGTGTACGCTCGCCATCATCGACCCCGGTGACTCGGACATCATCCGCTCC
ATGCCGGAGCAG
//
KE994260.1:subseq(135439,100146)	GeneWise	match	50146	46579	219.52	-	.	KE994260.1:subseq(135439,100146)-genewise-prediction-1
KE994260.1:subseq(135439,100146)	GeneWise	cds	50146	50001	0.00	-	0	KE994260.1:subseq(135439,100146)-genewise-prediction-1
KE994260.1:subseq(135439,100146)	GeneWise	intron	50000	49296	0.00	-	.	KE994260.1:subseq(135439,100146)-genewise-prediction-1
KE994260.1:subseq(135439,100146)	GeneWise	cds	49295	49165	0.00	-	1	KE994260.1:subseq(135439,100146)-genewise-prediction-1
KE994260.1:subseq(135439,100146)	GeneWise	intron	49164	46614	0.00	-	.	KE994260.1:subseq(135439,100146)-genewise-prediction-1
KE994260.1:subseq(135439,100146)	GeneWise	cds	46613	46579	0.00	-	2	KE994260.1:subseq(135439,100146)-genewise-prediction-1
//
