
genewise output
Score 18.60 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000038_2.0    4 QFQASCLVLFFLV                                     
                     QFQ  C++L F +                                     
                     QFQRQCILLVFFI                                     
KE993674.1:subs91545 ctcactattgtta                                     
                     atagagttttttt                                     
                     gtaaacaaagttt                                     


//
>KE993674.1:subseq(6835409,100206).pep
QFQRQCILLVFFI
//
>KE993674.1:subseq(6835409,100206).[91545:91583].sp
CAGTTTCAAAGACAATGCATATTATTAGTGTTTTTTATT
//
KE993674.1:subseq(6835409,100206)	GeneWise	match	91545	91583	18.60	+	.	KE993674.1:subseq(6835409,100206)-genewise-prediction-1
KE993674.1:subseq(6835409,100206)	GeneWise	cds	91545	91583	0.00	+	0	KE993674.1:subseq(6835409,100206)-genewise-prediction-1
//

genewise output
Score 112.53 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000038_2.0   35 GVTGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYXGLAAQ-YPEL 
                     G   ++YE  A TL G E + F ++ GK VL+ NVA+ XG  A+ + +L 
                     GALRSFYELSAKTLGG-ELVNFSRYRGKVVLIENVASLXGTTARDFTQL 
KE993674.1:sub-50218 ggtatttgctgaacgg gcgattctcgaggcagaggtctgaagagtacc 
                     gctgctaatccactgg attatcgaggattttaatcctggcccgatcat 
                     tcgggccgggcgggcc ggcccgccccgggccgcggccacgccgcccgg 


SPP00000038_2.0   83 NALQEELKNFGVIVLAFPCNQFGKQ                       E 
                     N LQ      G+ VL FPCNQFG Q                       E 
                     NELQGRYGAQGLAVLGFPCNQFGHQ                       E 
KE993674.1:sub-50074 agccgctggcgcggcgtctactgccGTATGAT  Intron 1   TAGg 
                     aataggagcagtcttgtcgaatgaa<0-----[49999:48906]-0>a 
                     cgggcccccggcggccccccgcccg                       g 


SPP00000038_2.0  109 PGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 
                        N EIL  LKYV PGSG+ P+F +F K +VNG+    VF F+K   P 
                     NTQNEEILNILKYVRPGSGYEPNFTMFAKCEVNGKDAHPVFEFIKEKLP 
KE993674.1:sub-48902 aacaggacaacatgccgagtgcataatgatggagaggccgtgtaagacc 
                     acaaaattattaatgcgggaacatcttcagatagaacacttattaaatc 
                     ccgcggcgccggtgtactccgcctcgccgcggccgtgcactgccgggtc 


SPP00000038_2.0  158 PTSD----LLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQA 
                       SD     L     ++W P+   DI WNFEKFL+GPDG P   +  +  
                     LPSDDPVSFLQDPKSIIWSPVSRSDIAWNFEKFLIGPDGQPFKRYSRKF 
KE993674.1:sub-48755 cctggcgttccgcaaaatacgtctgagtatgatcagcggcctactaaat 
                     tccaactcttaacagttggctcgcatcgataatttgcagactagaggat 
                     gacttcctcgactgccagcgtactccggttggcgtgccggtcgcctggc 


SPP00000038_2.0  203 PVSTVKSDILEYLKQ                                   
                         ++ DI   LKQ                                   
                     NTIGIEDDIKLLLKQ                                   
KE993674.1:sub-48608 aaagagggaacccac                                   
                     actgtaaatatttaa                                   
                     tccctgtccactgga                                   


//
>KE993674.1:subseq(6835409,100206).pep
GALRSFYELSAKTLGGELVNFSRYRGKVVLIENVASLXGTTARDFTQLNELQGRYGAQGL
AVLGFPCNQFGHQENTQNEEILNILKYVRPGSGYEPNFTMFAKCEVNGKDAHPVFEFIKE
KLPLPSDDPVSFLQDPKSIIWSPVSRSDIAWNFEKFLIGPDGQPFKRYSRKFNTIGIEDD
IKLLLKQ
//
>KE993674.1:subseq(6835409,100206).[50218:48562].sp
GGTGCCTTGAGGTCGTTCTACGAGCTGTCGGCCAAGACGCTGGGCGGCGAGCTGGTCAAC
TTCTCGCGCTACCGCGGCAAGGTGGTGCTCATCGAGAACGTGGCGTCCCTCTGAGGCACG
ACCGCCAGGGACTTCACCCAGCTGAACGAGCTGCAGGGCCGCTACGGCGCCCAGGGGCTC
GCGGTGCTCGGCTTCCCCTGCAACCAGTTCGGCCACCAGGAGAACACCCAGAACGAGGAG
ATCCTGAACATCCTGAAGTATGTGCGTCCAGGCAGTGGCTACGAGCCCAACTTTACCATG
TTCGCCAAGTGCGAGGTGAACGGCAAGGATGCGCACCCAGTCTTTGAGTTCATCAAGGAG
AAGCTTCCCCTGCCATCCGATGATCCCGTCTCTTTCCTGCAAGACCCTAAGAGCATCATA
TGGAGCCCGGTTTCACGCTCTGACATCGCGTGGAATTTTGAGAAGTTCCTGATTGGGCCC
GACGGGCAGCCTTTCAAGCGCTACAGTAGGAAGTTCAATACCATCGGCATTGAGGATGAC
ATCAAACTCCTTCTGAAGCAA
//
KE993674.1:subseq(6835409,100206)	GeneWise	match	50218	48564	115.53	-	.	KE993674.1:subseq(6835409,100206)-genewise-prediction-1
KE993674.1:subseq(6835409,100206)	GeneWise	cds	50218	50000	0.00	-	0	KE993674.1:subseq(6835409,100206)-genewise-prediction-1
KE993674.1:subseq(6835409,100206)	GeneWise	intron	49999	48906	0.00	-	.	KE993674.1:subseq(6835409,100206)-genewise-prediction-1
KE993674.1:subseq(6835409,100206)	GeneWise	cds	48905	48564	0.00	-	0	KE993674.1:subseq(6835409,100206)-genewise-prediction-1
//
