
genewise output
Score 22.43 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000036_2.0  193 IPVMRWSHRATVSSVKT                                 
                     +P+ RWS RAT S  +T                                 
                     LPLARWSSRATASMWRT                                 
KE993674.1:subs92466 cctgctatcgagtatca                                 
                     tctcgggcgcccctggc                                 
                     gggacgccgcaccggca                                 


//
>KE993674.1:subseq(6835409,100206).pep
LPLARWSSRATASMWRT
//
>KE993674.1:subseq(6835409,100206).[92466:92516].sp
CTGCCGTTGGCACGCTGGAGCTCCCGGGCCACAGCCTCCATGTGGCGCACA
//
KE993674.1:subseq(6835409,100206)	GeneWise	match	92466	92516	22.43	+	.	KE993674.1:subseq(6835409,100206)-genewise-prediction-1
KE993674.1:subseq(6835409,100206)	GeneWise	cds	92466	92516	0.00	+	0	KE993674.1:subseq(6835409,100206)-genewise-prediction-1
//

genewise output
Score 136.24 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000036_2.0   52 EYVSFKQYVGKHILFVNVATYCGLTAQ-YPELNALQEELKPYGLVVLGF 
                     E V+F +Y GK +L+ NVA+  G TA+ + +LN LQ      GL VLGF 
                     ELVNFSRYRGKVVLIENVASLXGTTARDFTQLNELQGRYGAQGLAVLGF 
KE993674.1:sub-50170 gcgattctcgaggcagaggtctgaagagtaccagccgctggcgcggcgt 
                     attatcgaggattttaatcctggcccgatcataataggagcagtcttgt 
                     ggcccgccccgggccgcggccacgccgcccggcgggcccccggcggccc 


SPP00000036_2.0  100 PCNQFGKQ                       EPGDNKEILPGLKYVRPG 
                     PCNQFG Q                       E   N+EIL  LKYVRPG 
                     PCNQFGHQ                       ENTQNEEILNILKYVRPG 
KE993674.1:sub-50023 ctactgccGTATGAT  Intron 1   TAGgaacaggacaacatgccg 
                     cgaatgaa<0-----[49999:48906]-0>aacaaaattattaatgcg 
                     cccgcccg                       gccgcggcgccggtgtac 


SPP00000036_2.0  126 GGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTF----KSIS 
                      G+ P+F +F K +VNG+    VF F+K   P PS+   +F    KSI  
                     SGYEPNFTMFAKCEVNGKDAHPVFEFIKEKLPLPSDDPVSFLQDPKSII 
KE993674.1:sub-48851 agtgcataatgatggagaggccgtgtaagacccctggcgttccgcaaaa 
                     ggaacatcttcagatagaacacttattaaatctccaactcttaacagtt 
                     tccgcctcgccgcggccgtgcactgccgggtcgacttcctcgactgcca 


SPP00000036_2.0  171 WDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ   
                     W PV   DI WNFEKFL+GPDG P  R+S +     ++ DI   LKQ   
                     WSPVSRSDIAWNFEKFLIGPDGQPFKRYSRKFNTIGIEDDIKLLLKQ   
KE993674.1:sub-48704 tacgtctgagtatgatcagcggcctactaaataaagagggaacccac   
                     ggctcgcatcgataatttgcagactagaggatactgtaaatatttaa   
                     gcgtactccggttggcgtgccggtcgcctggctccctgtccactgga   


//
>KE993674.1:subseq(6835409,100206).pep
ELVNFSRYRGKVVLIENVASLXGTTARDFTQLNELQGRYGAQGLAVLGFPCNQFGHQENT
QNEEILNILKYVRPGSGYEPNFTMFAKCEVNGKDAHPVFEFIKEKLPLPSDDPVSFLQDP
KSIIWSPVSRSDIAWNFEKFLIGPDGQPFKRYSRKFNTIGIEDDIKLLLKQ
//
>KE993674.1:subseq(6835409,100206).[50170:48562].sp
GAGCTGGTCAACTTCTCGCGCTACCGCGGCAAGGTGGTGCTCATCGAGAACGTGGCGTCC
CTCTGAGGCACGACCGCCAGGGACTTCACCCAGCTGAACGAGCTGCAGGGCCGCTACGGC
GCCCAGGGGCTCGCGGTGCTCGGCTTCCCCTGCAACCAGTTCGGCCACCAGGAGAACACC
CAGAACGAGGAGATCCTGAACATCCTGAAGTATGTGCGTCCAGGCAGTGGCTACGAGCCC
AACTTTACCATGTTCGCCAAGTGCGAGGTGAACGGCAAGGATGCGCACCCAGTCTTTGAG
TTCATCAAGGAGAAGCTTCCCCTGCCATCCGATGATCCCGTCTCTTTCCTGCAAGACCCT
AAGAGCATCATATGGAGCCCGGTTTCACGCTCTGACATCGCGTGGAATTTTGAGAAGTTC
CTGATTGGGCCCGACGGGCAGCCTTTCAAGCGCTACAGTAGGAAGTTCAATACCATCGGC
ATTGAGGATGACATCAAACTCCTTCTGAAGCAA
//
KE993674.1:subseq(6835409,100206)	GeneWise	match	50170	48564	139.24	-	.	KE993674.1:subseq(6835409,100206)-genewise-prediction-1
KE993674.1:subseq(6835409,100206)	GeneWise	cds	50170	50000	0.00	-	0	KE993674.1:subseq(6835409,100206)-genewise-prediction-1
KE993674.1:subseq(6835409,100206)	GeneWise	intron	49999	48906	0.00	-	.	KE993674.1:subseq(6835409,100206)-genewise-prediction-1
KE993674.1:subseq(6835409,100206)	GeneWise	cds	48905	48564	0.00	-	0	KE993674.1:subseq(6835409,100206)-genewise-prediction-1
//
