Find start end points: [63,49834][135,52081] Score 40551
Recovering alignment: Alignment recovered] Explicit read offe 55%

genewise output
Score 117.01 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

Information
	Name gi|397458552|gb|JH736949.1|:subseq(85500,100000) is longer than
allowed name block (15). Truncating

SPP00000077_2.0   64 IPFYHNLVMKHLPGADPELVLLGRRYEELE                    
                     +P  HNLVMKHLPGADPELVLL  RYEELE                    
                     VPSSHNLVMKHLPGADPELVLLNIRYEELE                    
gi|397458552|g-50168 gctacacgaacccgggcgcgccaaatggcg                    
                     tccgaatttaatcgcacattttatgaaata                    
                     gtccccggggtctacctaggccccatgaag                    


SPP00000077_2.0   94                        RIPLSEMTREEINALVQELGFYRKAA 
                                            RIPLS+MTREEIN +VQELGFYRK + 
                                            RIPLSDMTREEINQMVQELGFYRKES 
gi|397458552|g-50078 GTAAGAG  Intron 1   CAGaaccagaacggaacagcgcgttcagt 
                     <0-----[50078:48048]-0>gtctgatcgaataattaatgtagaac 
                                            atcgtcgcgggccggcgggtctcgga 


SPP00000077_2.0  120 PDAQVPPEYVWAPAKPP                                 
                      DA VP E+  APAKPP                                 
                     QDAPVPEEFQLAPAKPP                                 
gi|397458552|g-47969 cggcgcggtccgcgacc                                 
                     aacctcaatatcccacc                                 
                     atcagtgacgtctcgcg                                 


//
>gi|397458552|gb|JH736949.1|:subseq(85500,100000).pep
VPSSHNLVMKHLPGADPELVLLNIRYEELERIPLSDMTREEINQMVQELGFYRKESQDAP
VPEEFQLAPAKPP
//
>gi|397458552|gb|JH736949.1|:subseq(85500,100000).[50168:47917].sp
GTGCCTTCCAGCCACAACCTGGTGATGAAGCATCTCCCTGGAGCCGACCCTGAACTGGTG
CTCCTCAACATCAGATATGAGGAACTAGAGAGAATTCCCCTGAGTGACATGACCCGGGAG
GAGATCAACCAGATGGTCCAGGAGCTGGGTTTCTATCGCAAGGAGTCACAAGATGCCCCA
GTGCCTGAGGAATTCCAGCTTGCCCCTGCCAAGCCCCCG
//
gi|397458552|gb|JH736949.1|:subseq(85500,100000)	GeneWise	match	50168	47919	117.01	-	.	gi|397458552|gb|JH736949.1|:subseq(85500,100000)-genewise-prediction-1
gi|397458552|gb|JH736949.1|:subseq(85500,100000)	GeneWise	cds	50168	50079	0.00	-	0	gi|397458552|gb|JH736949.1|:subseq(85500,100000)-genewise-prediction-1
gi|397458552|gb|JH736949.1|:subseq(85500,100000)	GeneWise	intron	50078	48048	0.00	-	.	gi|397458552|gb|JH736949.1|:subseq(85500,100000)-genewise-prediction-1
gi|397458552|gb|JH736949.1|:subseq(85500,100000)	GeneWise	cds	48047	47919	0.00	-	0	gi|397458552|gb|JH736949.1|:subseq(85500,100000)-genewise-prediction-1
//