Output_id:  SelW.1.selenocysteine
----------  ---------------------
-Species        Chlorocebus sabaeus                          -Taxid 60711
-Target         /home/U73970/luke/Selenoprofiles/selenoprofiles_3_installation/genome_linked/genome.fa
-Chromosome (+) gi|511782573|gb|CM001961.1|
-Program        genewise
-Query name     ref|NP_999142.1| selenoprotein W, 1 [Sus scrofa]
-Query range    10-87      length:87    coverage: 0.9
-Profile range  288-433    length:494   coverage: 0.3    sec_positions: [288, 291]
-ASI:           0.1986     (ignoring gaps: 0.2513)
-AWSIc:         0.361     Z-score: -1.499
-AWSIw:         0.4122     Z-score: -1.287
-State          kept

------- alignment -------
Query   -------UGAUGYKSKYLQLKK- <---Intron---> -------KLEDEFPGRLDICGEGTPQVTGFFEVLVAGKLVHSKKGGDGYVDTESKFLKLVA
                ||||||||||||||  <   313nt    >        | |||    |||| / ||| ||||||/|||||/||||  |||||||/  |||||
Target  MALVSCLCGAUGYKSKYLQLKKQ                KKKKEKKKEEDEVLWALDICSKRTPQATGFFEVMVAGKLIHSKKEDDGYVDTENTCLKLVA
        agcgatttggtgtatatcccaac                aaaagaaagggggctgtgataaaaccgagttggagggatactaaggggtggagaatcacgg
        tcttggtggcggaacaatataaa   gt     ag    aaaaaaaaaaaattgctatggagccaccgttatttcgattacaaaaagatacaacgtattc
        gtcgttatctaccgcgttgcgg                ggaaaaagaaatgccgtgtcccgatcgctactaagacgggtctggattccgcaacgtggggc
               *  *                                                                                         

Query   AIKAALAQG
        |||||| ||
Target  AIKAALTQG
        gaaggtacg
        ctacctcag
        ccaccgtgc
                 
------- positions -------
Exon 1    101740763    101740830
Exon 2    101741144    101741354

-------- features -------
None
--------- 3' seq --------
Total sequence length available downstream >= 6000
Sequence until first stop codon: 
TAA
 *