T-COFFEE, Version_9.03.r1318 (2012-07-12 19:05:45 - Revision 1318 - Build 366)
Cedric Notredame
CPU TIME:0 sec.
SCORE=99
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BAD AVG GOOD
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Homo : 98
Pan : 99
Mus : 98
Canis : 98
Macaca : 98
Pongo : 98
Chlorocebus : 98
cons : 99
Homo 1 MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGA-AGQRD 38
Pan 1 -----------------------GGVRGAARGA-AGQRD 15
Mus 1 V----AALRGPSRRFRPRT-------RALTRGT-RGQQS 27
Canis 1 -----VALRGSAHAHR-------GRAGGAGRGR-AGQQN 26
Macaca 1 ------ALRGLGGRFRWRTQAVAGGVRGAARGA-AGQRD 32
Pongo 1 ------ALRGLGGRFRWRTQAVAGGVRGAARGA-AGQRD 32
Chlorocebus 1 MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGAAAGQRD 39
cons 1 . ** **:. 39
Homo 39 YDLLVVGGGSGGLACAKEAAQLGRKVAVVDYVEPSPQGT 77
Pan 16 YDLLVVGGGSGGLACAKEAAQLGRKVAVVDYVEPSPQGT 54
Mus 28 FDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGT 66
Canis 27 YDLLVIGGGSGGLACAKEAAQLGKKVAVVDYVEPSPRGT 65
Macaca 33 YDLLVIGGGSGGLACAKEAAQLGRKVAVVDYVEPSPQGT 71
Pongo 33 YDLLVVGGGSGGLACAKEAAQLGRKVAVVDYVEPSPQGT 71
Chlorocebus 40 YDLLVIGGGSGGLACAKEAAQLGRKVAVVDYVEPSPQGT 78
cons 40 :****:*****************:****.*******:** 78
Homo 78 RWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEV 116
Pan 55 RWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEV 93
Mus 67 KWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 105
Canis 66 KWGLGGTCVNVGCIPKKLMHQAALLGSMIRDAPHYGWDV 104
Macaca 72 RWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPHYGWEV 110
Pongo 72 RWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPHYGWEV 110
Chlorocebus 79 RWGLGGTCVNVGCIPKKLMHQAALLGGLIRDAPHYGWEV 117
cons 79 :*************************.:*:** :***:* 117
Homo 117 AQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFN 155
Pan 94 AQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFN 132
Mus 106 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFN 144
Canis 105 AQPVLHDWRTMAEAVQNHVKSLNWGHRVQLQDRKVTYFN 143
Macaca 111 AQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFN 149
Pongo 111 AQPVLHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFN 149
Chlorocebus 118 AQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFN 156
cons 118 **** *:*:.*************************.*** 156
Homo 156 IKASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYP 194
Pan 133 IKASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYP 171
Mus 145 IKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYP 183
Canis 144 VKASFVNEHTVCGVAKGGKETLLSAEHIVIATGGRPRYP 182
Macaca 150 IKASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYP 188
Pongo 150 IKASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYP 188
Chlorocebus 157 IKASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYP 195
cons 157 :*****:**** ** **** ****:**:********** 195
Homo 195 THIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECA 233
Pan 172 THIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECA 210
Mus 184 TQVKGALEYGITSDDIFWLKESPGKPA---AEDVALECA 219
Canis 183 THIEGALEYGITSDDIFWLKESPGKPP----ADVALECA 217
Macaca 189 THIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECA 227
Pongo 189 THIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECA 227
Chlorocebus 196 THIEGALEYGITSDDIFWLKESPGKTXGLPHAYVALECA 234
cons 196 *:::*********************. ****** 234
Homo 234 GFLTGIGLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGT 272
Pan 211 GFLTGIGLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGT 249
Mus 220 GFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGT 258
Canis 218 GFLTGLGLDTTIMIRSIPLRGFDQQMSSLVTEYMASQGT 256
Macaca 228 GFLTGIGLDTTVMIRSIPLRGFDQQMSSMVIEHMASHGT 266
Pongo 228 GFLTGIGLDTTIMMRSIPLRGFDQQMSSLVIEHMASHGT 266
Chlorocebus 235 GFLTGIGLDTTVMIRSIPLRGFDQQMSSMVIEHMASHGT 273
cons 235 *****:*****:*:**************:* *:* *:** 273
Homo 273 RFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTV 311
Pan 250 RFLRGCAPSRVRRLPDGQLQVTWEDCTTGKEDTGTFDTV 288
Mus 259 QFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTV 297
Canis 257 RFLRGCTPSRVRRLPDGQLQVTWENLTSGKEDVGTFDTV 295
Macaca 267 QFLRGCAPSRVRRLPDGHLQVTWEDCTTGKEDTGTFDTV 305
Pongo 267 RFLRGCAPSRVRRLPDGQLQVTWEDRATGKEDMGTFDTV 305
Chlorocebus 274 RFLRGCAPSRVRRLPDGHLQVTWEDHTTGKEDTGTFDTV 312
cons 274 :**:**.**::::** .:******: ::**** ****** 312
Homo 312 LWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSV 350
Pan 289 LWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSV 327
Mus 298 LWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSV 336
Canis 296 LWAIGRIPETKSLNLEKAGVNTNPNSQKILVNAQEATSI 334
Macaca 306 LWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREGTSV 344
Pongo 306 LWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSV 344
Chlorocebus 313 LWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREGTSV 351
cons 313 ******:*:*::*******:.*.*..***:*:::*.**: 351
Homo 351 PHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSDLM 389
Pan 328 PHIYAVGDVVEGRPELTPTAIMAGRLLVQRLFGGSSDLM 366
Mus 337 PHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLM 375
Canis 335 PHIYAIGDVAEGRPELTPTAIMAGRLLAQRLCGQASDVM 373
Macaca 345 PHIYAIGDVVEGRPELTPTAIMAGRLLVQRLFGGSSDLM 383
Pongo 345 PHIYAIGDVVEGRPELTPTAIMAGRLLVQRLFGGSSDLM 383
Chlorocebus 352 PHIYAIGDVVEGRPELTPTAIMAGRLLVQRLFGGSSDLM 390
cons 352 *****:***.******** ** **:**.*** * :* :* 390
Homo 390 DYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHA 428
Pan 367 DYDNVPTTVFTPLEYGCVGLSEEEAVAHHGQEHVEVYHA 405
Mus 376 DYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHA 414
Canis 374 DYDNVPTTVFTPLEYGCVGLSEEEAVTRHGEEHVEVYHA 412
Macaca 384 DYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHA 422
Pongo 384 DYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHA 422
Chlorocebus 391 DYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHA 429
cons 391 **.***********************: **:******** 429
Homo 429 HYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGP 467
Pan 406 HYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGP 444
Mus 415 YYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGP 453
Canis 413 YYKPLEFTVAERDASQCYVKMVCLRKPPQLVLGLHFLGP 451
Macaca 423 HYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGP 461
Pongo 423 HYKPLEFTVAGRDASQCYVKMVCLREPPQLLLGLHFLGP 461
Chlorocebus 430 HYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGP 468
cons 430 :********* *******:****:*:****:******** 468
Homo 468 NAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEVVKL 506
Pan 445 NAGEVTQGFALGIIPAAH--------------------- 462
Mus 454 NAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKL 492
Canis 452 NAGEVTQGFALGIKCGASYAQVMRTVGIHPTCAEEVAKL 490
Macaca 462 NAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEVVKL 500
Pongo 462 NAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEVVKL 500
Chlorocebus 469 NAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEVVKL 507
cons 469 ************* .* 507
Homo 507 RISKRSGLDPTVTGCUG 523
Pan 463 --LQRSGLDPTVTVCUG 477
Mus 493 HISKRSGLEPTVTGCUG 509
Canis 491 RITKRSGLDPTVTGCUG 507
Macaca 501 RISKRSGLDPTVTGCUG 517
Pongo 501 RISKRSGLDPTVTGCUG 517
Chlorocebus 508 RISKRSGLDPTVTGCUG 524
cons 508 :****:**** *** 524