genewise output
Score 999.83 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000138_2.0    1 MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGAA                
                     MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGAA                
                     MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGAA                
gi|511782574|gb27553 aggagggccgtggctctcacggggggcgggcggg                
                     tcctctctggtgggtgggcactcggtggccggcc                
                     gggggggggaaagccgggggtggcgagctggcga                


SPP00000138_2.0   35                           GQRDYDLLVVGGGSGGLACAKE  
                                               GQRDYDLLV+GGGSGGLACAKE  
                               A:A[gca]        GQRDYDLLVIGGGSGGLACAKE  
gi|511782574|gb27655 GGTAGGAT  Intron 1   CAGCAgccgtgccgagggtggcgtgag  
                      <1-----[27656:37537]-1>  gagaaattttgggcggtcgcaa  
                                               tggcttcggtcgatccgttcgg  


SPP00000138_2.0   58                           AQLGRKVAVVDYVEPSPQ      
                                               AQLGRKVAVVDYVEPSPQ      
                               A:A[gcc]        AQLGRKVAVVDYVEPSPQ      
gi|511782574|gb37606 GGTATGTA  Intron 2   CAGCCgccgaagggggtggctcc      
                      <1-----[37607:48792]-1>  catggatcttaataccca      
                                               tggagggcggccgattca      


SPP00000138_2.0   77                           TRWGLGGTCVNVGCIPKKLMHQA 
                                               TRWGLGGTCVNVGCIPKKLMHQA 
                               G:G[ggc]        TRWGLGGTCVNVGCIPKKLMHQA 
gi|511782574|gb48849 GGTAGGCA  Intron 3   CAGGCactgcggatgaggtacaacaccg 
                      <1-----[48850:50000]-1>  cgggtggcgtatggtcaattaac 
                                               cggcctcccctgccccggggcgg 


SPP00000138_2.0  101 ALLGGLIQDAPNYGWEVAQPVPHD                          
                     ALLGGLI+DAP+YGWEVAQPVPHD                          
                     ALLGGLIRDAPHYGWEVAQPVPHD           W:W[tgg]       
gi|511782574|gb50072 gccggcacggcctgtgggccgccgTGGTAAGGA  Intron 4       
                     cttggttgaccaaggatcactcaa  <2-----[50146:50772]    
                     aggacgcatcccccgggcgcggtc                          


SPP00000138_2.0  125     RKMAEAVQNHVKSLNWGHRVQLQD                      
                         RKMAEAVQNHVKSLNWGHRVQLQD                      
                         RKMAEAVQNHVKSLNWGHRVQLQD                      
gi|511782574|gb50770 CAGGaaaggggcacgattatgccgcccg                      
                     -2> gatcactaaatactaggagtataa                      
                         gggaattatcggcgcgcctcgggc                      


SPP00000138_2.0  150                           KVKYFNIKASFVDEHTVCGVAKG 
                                               KVKYFNIKASFVDEHTVCGVAKG 
                                R:R[aga]       KVKYFNIKASFVDEHTVCGVAKG 
gi|511782574|gb50846 AGGTACGGA  Intron 5   CAGAagattaaagatgggcagtgggag 
                       <2-----[50848:53180]-2> ataatatacgttaaactggtcag 
                                               acgctccaccttcgcgtcctcat 


SPP00000138_2.0  174 GKE                       ILLSADHIIIATGGRPRYPTH   
                     GKE                       ILLSADHIIIATGGRPRYPTH   
                     GKE                       ILLSADHIIIATGGRPRYPTH   
gi|511782574|gb53251 gagGTGAGCA  Intron 6   CAGacctggcaaagaggccatcac   
                     gaa<0-----[53260:53746]-0>tttccaatttccgggcgacca   
                     gag                       tgaatcccctttaggggccgc   


SPP00000138_2.0  198                        IEGALEYGITSDDIFWLKESPGK    
                                            IEGALEYGITSDDIFWLKESPGK    
                                            IEGALEYGITSDDIFWLKESPGK    
gi|511782574|gb53810 GTGAGTG  Intron 7   CAGagggtgtgaaaggattcagtcga    
                     <0-----[53810:57572]-0>tagctaagtcgaattgtaaccga    
                                            catcgatacattcctgggactaa    


SPP00000138_2.0  221                           LVVGAS                  
                                               LVVGAS                  
                                T:T[acg]       LVVGAS                  
gi|511782574|gb57642 ACGTAAGGC  Intron 8   CAGGtgggga                  
                       <2-----[57644:68230]-2> tttgcg                  
                                               ggcgcc                  


SPP00000138_2.0  228                           VALECAGFLTGIGLDTTIMMRSI 
                                               VALECAGFLTGIGLDTT+M+RSI 
                               Y:Y[tac]        VALECAGFLTGIGLDTTVMIRSI 
gi|511782574|gb68250 TGTATCCT  Intron 9   CAGACggcgtggtcagagcgaagaacaa 
                      <1-----[68251:69160]-1>  tctagcgttcgtgtacctttggt 
                                               gcggttccctgcggctccgaccc 


SPP00000138_2.0  252 PLRGFDQ                       QMSSMVIEHMASHGTRFLR 
                     PLRGFDQ                       QMSSMVIEHMASHGTRFLR 
                     PLRGFDQ                       QMSSMVIEHMASHGTRFLR 
gi|511782574|gb69232 cccgtgcGTAGTGA  Intron 10  CAGcattagagcagtcgactca 
                     ctggtaa<0-----[69253:72034]-0>atcctttaatccagcgttg 
                     ccccccg                       agccgcagcgattccgcgg 


SPP00000138_2.0  278 GCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWAI           
                     GCAPSRVRRLPDG LQVTWED TTGKEDTGTFDTVLWAI           
                     GCAPSRVRRLPDGHLQVTWEDHTTGKEDTGTFDTVLWAI           
gi|511782574|gb72092 gtgctcgaaccggcccgatggcaagaggagatgagctga           
                     ggcccgtggtcagatatcgaaaccgaaacgctacttgct           
                     ctcccacggcttccggccggccctcggcacccctcggca           


SPP00000138_2.0  317                           RVPDTRSLNLEKAGVDTSPDTQK 
                                               RVPDTRSLNLEKAGVDTSPDTQK 
                               G:G[ggt]        RVPDTRSLNLEKAGVDTSPDTQK 
gi|511782574|gb72209 GGTAAGGG  Intron 11  CAGGTcgcgaaacatgaggggaacgaca 
                      <1-----[72210:84692]-1>  gtcacggtataacgtacgcacaa 
                                               aaaccatgtgggtgattccctgg 


SPP00000138_2.0  341 ILVDSREATSVPHIYAIGDVVE                       GRPE 
                     ILVDSRE TSVPHIYAIGDVVE                       GRPE 
                     ILVDSREGTSVPHIYAIGDVVE                       GRPE 
gi|511782574|gb84764 acggtcggatgccatgagggggGTACGGC  Intron 12  AAGgccg 
                     tttacgagcctcatactgatta<0-----[84830:87434]-0>ggca 
                     cggccgacctgcccccttcggg                       ggtg 


SPP00000138_2.0  367 LTPIAIMAGRLLVQRLFGGSSDLMDYDN                      
                     LTP AIMAGRLLVQRLFGGSSDLMDYDN                      
                     LTPTAIMAGRLLVQRLFGGSSDLMDYDN                      
gi|511782574|gb87447 cacagaaggaccgccctggttgcagtgaGTGAGTT  Intron 13    
                     tccccttcggtttagttggccattaaaa<0-----[87531:87881]  
                     gacgtcgtggcggggcccgcacggctct                      


SPP00000138_2.0  395    VPTTVFTPLEYGCVGLSEEEAVARHGQEHVE                
                        VPTTVFTPLEYGCVGLSEEEAVARHGQEHVE                
                        VPTTVFTPLEYGCVGLSEEEAVARHGQEHVE                
gi|511782574|gb87879 CAGgcaagtaccgtgtggctggggggccgcgcgg                
                     -0>tcccttcctaaggtgtcaaactcgagaaata                
                        tctccccgggtctgggcgggagtccgggttg                


SPP00000138_2.0  426                        VYHAHYKPLEFTVAGRDASQCYVK   
                                            VYHAHYKPLEFTVAGRDASQCYVK   
                                            VYHAHYKPLEFTVAGRDASQCYVK   
gi|511782574|gb87975 GTGAGGC  Intron 14  CAGgtcgctaccgtagggcggtcttga   
                     <0-----[87975:89696]-0>taacaaactatctcggaccagata   
                                            ctccttagggcggtagtacgttag   


SPP00000138_2.0  450                        MVCLREPPQLVLGLHFLGPNAGEVTQ 
                                            MVCLREPPQLVLGLHFLGPNAGEVTQ 
                                            MVCLREPPQLVLGLHFLGPNAGEVTQ 
gi|511782574|gb89769 GTGAGCA  Intron 15  CAGagtcagccccgcgcctcgcaggggac 
                     <0-----[89769:89946]-0>ttgtgaccatttgtattgcacgatca 
                                            ggcgggcgggggcgcctcccacatta 


SPP00000138_2.0  476 GFALGI                          CGASYAQVMRTVGIHPT 
                     GFALGI                          CGASYAQVMRTVGIHPT 
                     GFALGI           K:K[aag]       CGASYAQVMRTVGIHPT 
gi|511782574|gb90025 gtgcgaAAGTAAGTC  Intron 16  CAGGtggttgcgacaggacca 
                     gtctgt  <2-----[90045:90899]-2> ggccacattgctgtacc 
                     attggc                          tgcccgggggcgtctca 


SPP00000138_2.0  500 CSEEVVKLRISKRSGLDPTVTGC                           
                     CSEEVVKLRISKRSGLDPTVTGC                           
                     CSEEVVKLRISKRSGLDPTVTGC                           
gi|511782574|gb90952 ttggggaccatactgcgcagagt                           
                     gcaattatgtcagcgtacctcgg                           
                     ccggacggcccgcacgccggacc                           


//
Making a A in phase 1 intron
Making a A in phase 1 intron
Making a G in phase 1 intron
Making a W in phase 2 intron
Making a R in phase 2 intron
Making a T in phase 2 intron
Making a Y in phase 1 intron
Making a G in phase 1 intron
Making a K in phase 2 intron
>gi|511782574|gb|CM001960.1|:subseq(5775651,141026).pep
MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVIGGGSGGLACAKEAAQ
LGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIRDAPHYGWEVAQP
VPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLS
ADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGI
GLDTTVMIRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGHLQVTWEDHT
TGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREGTSVPHIYAIGDV
VEGRPELTPTAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHG
QEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALG
IKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGC
//
>gi|511782574|gb|CM001960.1|:subseq(5775651,141026).[27553:91020].sp
ATGGCGGCGATGGCGGTGGCGCTGCGGGGATTAGGAGGGCGCTTCCGGTGGCGGACGCAG
GCTGTGGCGGGCGGGGTACGGGGCGCTGCGCGGGGCGCGGCAGCAGGTCAGCGGGACTAT
GATCTCCTGGTGATTGGCGGGGGATCTGGCGGCCTGGCTTGTGCCAAGGAGGCCGCTCAG
CTGGGAAGGAAGGTGGCCGTGGTGGACTACGTGGAACCTTCTCCCCAAGGCACCCGGTGG
GGCCTCGGTGGCACCTGCGTCAATGTGGGCTGCATCCCCAAGAAGCTGATGCACCAGGCG
GCACTGCTGGGAGGCCTGATCCGAGATGCCCCCCACTACGGCTGGGAGGTGGCCCAGCCC
GTGCCGCATGACTGGAGGAAGATGGCAGAAGCTGTTCAAAATCACGTGAAGTCCTTGAAC
TGGGGCCACCGTGTCCAGCTGCAGGACAGAAAAGTCAAGTACTTTAACATCAAAGCCAGC
TTTGTTGACGAGCACACGGTTTGCGGCGTTGCCAAAGGTGGGAAAGAGATTCTGCTATCA
GCTGACCACATCATCATTGCTACTGGAGGGCGGCCGAGGTACCCCACGCACATCGAAGGT
GCCTTGGAATATGGAATCACAAGTGATGACATCTTTTGGCTGAAGGAATCCCCTGGAAAA
ACGTTGGTGGTCGGGGCCAGCTACGTGGCCCTGGAGTGTGCTGGCTTCCTCACTGGGATC
GGGCTGGACACTACCGTCATGATACGCAGCATCCCCCTCCGCGGCTTCGACCAGCAAATG
TCCTCCATGGTCATAGAGCACATGGCATCTCATGGCACCCGGTTCCTGAGGGGCTGTGCC
CCCTCCCGAGTCAGGAGGCTCCCTGATGGCCACCTGCAGGTCACCTGGGAGGACCACACC
ACTGGCAAGGAGGACACAGGCACCTTCGACACTGTCCTGTGGGCCATAGGTCGAGTACCA
GACACCAGAAGTCTGAATTTGGAGAAGGCTGGGGTAGATACTAGCCCCGACACTCAGAAG
ATCCTGGTGGACTCCCGGGAAGGCACCTCTGTGCCCCACATCTACGCCATTGGTGACGTG
GTGGAGGGGCGGCCTGAGCTGACACCCACGGCTATCATGGCTGGGAGGCTCCTGGTGCAG
CGGCTCTTCGGCGGGTCCTCAGACCTGATGGACTATGACAATGTTCCCACTACCGTCTTC
ACCCCGCTGGAGTATGGCTGTGTGGGGCTGTCCGAGGAGGAGGCAGTGGCTCGCCACGGG
CAGGAGCATGTTGAGGTCTATCACGCCCATTATAAACCGCTGGAGTTCACGGTGGCTGGA
CGGGATGCATCCCAGTGTTATGTAAAGATGGTGTGCCTGAGGGAGCCCCCGCAGCTGGTG
CTGGGCCTGCACTTCCTTGGCCCCAACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGGG
ATCAAGTGTGGGGCCTCCTACGCGCAGGTGATGCGGACCGTGGGTATCCATCCCACATGC
TCCGAGGAGGTAGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACGGTGACA
GGCTGC
//
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	match	27553	91020	999.83	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	27553	27655	0.00	+	0	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	27656	37537	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	37538	37606	0.00	+	2	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	37607	48792	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	48793	48849	0.00	+	2	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	48850	50000	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	50001	50145	0.00	+	2	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	50146	50772	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	50773	50847	0.00	+	1	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	50848	53180	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	53181	53259	0.00	+	1	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	53260	53746	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	53747	53809	0.00	+	0	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	53810	57572	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	57573	57643	0.00	+	0	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	57644	68230	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	68231	68250	0.00	+	1	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	68251	69160	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	69161	69252	0.00	+	2	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	69253	72034	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	72035	72209	0.00	+	0	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	72210	84692	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	84693	84829	0.00	+	2	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	84830	87434	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	87435	87530	0.00	+	0	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	87531	87881	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	87882	87974	0.00	+	0	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	87975	89696	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	89697	89768	0.00	+	0	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	89769	89946	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	89947	90044	0.00	+	0	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	intron	90045	90899	0.00	+	.	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
gi|511782574|gb|CM001960.1|:subseq(5775651,141026)	GeneWise	cds	90900	91020	0.00	+	1	gi|511782574|gb|CM001960.1|:subseq(5775651,141026)-genewise-prediction-1
//